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4433-40-3

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4433-40-3 Usage

Description

5-Hydroxymethyluracil is a product of oxidative damage to DNA, predominantly by hydroxyl radical via the Fenton reaction. It can be used as a potential epigenetic mark enhancing or inhibiting transcription with bacterial RNA polymerase.

Chemical Properties

White Powder

Uses

5-Hydroxymethyluracil (cas# 4433-40-3) is a compound useful in organic synthesis.

Definition

ChEBI: 5-hydroxymethyluracil is a primary alcohol that is uracil bearing a hydroxymethyl substituent at the 5-position. It has a role as a human metabolite. It is a primary alcohol and a pyrimidone. It derives from a uracil.

Biosynthesis

5-Hydroxymethyluracil is produced by the enzyme thymine dioxygenase (EC 1.14.11.6) which catalyzes the chemical reaction thymine + 2-oxoglutarate + O2 <-> 5-hydroxymethyluracil + succinate + CO2. The 3 substrates of this enzyme are thymine, 2-oxoglutarate, and O2, whereas its 3 products are 5-hydroxymethyluracil, succinate, and CO2. The 5hmU base can also be generated by oxidation/hydroxylation of thymine by the Ten-Eleven-Translocation (TET) proteins or result from deamination of 5hmC. DNA containing 5hmU has been reported to be more flexible and hydrophilic.

Biotechnological Production

5-Hydroxymethyluracil (5hmU) is a thymine base modification found in the genomic DNA of diverse organisms ranging from bacteriophages to mammals.

Check Digit Verification of cas no

The CAS Registry Mumber 4433-40-3 includes 7 digits separated into 3 groups by hyphens. The first part of the number,starting from the left, has 4 digits, 4,4,3 and 3 respectively; the second part has 2 digits, 4 and 0 respectively.
Calculate Digit Verification of CAS Registry Number 4433-40:
(6*4)+(5*4)+(4*3)+(3*3)+(2*4)+(1*0)=73
73 % 10 = 3
So 4433-40-3 is a valid CAS Registry Number.
InChI:InChI=1/C5H6N2O3/c8-2-3-1-6-5(10)7-4(3)9/h1,8H,2H2,(H2,6,7,9,10)

4433-40-3 Well-known Company Product Price

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  • Alfa Aesar

  • (L01682)  5-(Hydroxymethyl)uracil, 98%   

  • 4433-40-3

  • 1g

  • 373.0CNY

  • Detail
  • Alfa Aesar

  • (L01682)  5-(Hydroxymethyl)uracil, 98%   

  • 4433-40-3

  • 5g

  • 1605.0CNY

  • Detail
  • Aldrich

  • (852589)  5-(Hydroxymethyl)uracil  97%

  • 4433-40-3

  • 852589-1G-A

  • 485.55CNY

  • Detail

4433-40-3SDS

SAFETY DATA SHEETS

According to Globally Harmonized System of Classification and Labelling of Chemicals (GHS) - Sixth revised edition

Version: 1.0

Creation Date: Aug 13, 2017

Revision Date: Aug 13, 2017

1.Identification

1.1 GHS Product identifier

Product name 5-hydroxymethyluracil

1.2 Other means of identification

Product number -
Other names 5-(Hydroxymethyl)pyrimidine-2,4(1H,3H)-dione

1.3 Recommended use of the chemical and restrictions on use

Identified uses For industry use only.
Uses advised against no data available

1.4 Supplier's details

1.5 Emergency phone number

Emergency phone number -
Service hours Monday to Friday, 9am-5pm (Standard time zone: UTC/GMT +8 hours).

More Details:4433-40-3 SDS

4433-40-3Synthetic route

formaldehyd
50-00-0

formaldehyd

uracil
66-22-8

uracil

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

Conditions
ConditionsYield
With potassium hydroxide In water at 50 - 52℃; for 68h;100%
With potassium hydroxide for 0.05h; microwave irradiation;98%
With potassium hydroxide In water at 0 - 55℃; for 36h;98%
5-chloromethyluracil
3590-48-5

5-chloromethyluracil

ethylene glycol
107-21-1

ethylene glycol

A

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

B

5-<(2-hydroxyethoxy)methyl>uracil
88459-62-5

5-<(2-hydroxyethoxy)methyl>uracil

Conditions
ConditionsYield
With pyridine In N,N-dimethyl-formamide for 24h; Title compound not separated from byproducts;A n/a
B 46%
thymin
65-71-4

thymin

A

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

B

2,4-dioxo-1,2,3,4-tetrahydropyrimidine-5-carbaldehyde
1195-08-0

2,4-dioxo-1,2,3,4-tetrahydropyrimidine-5-carbaldehyde

Conditions
ConditionsYield
With sodium persulfate In water at 85 - 90℃; for 7h;A 5%
B 41%
With sodium thiosulfate In water at 85 - 90℃; for 7h;A 5%
B 41%
With sodium persulfate In water at 85℃; for 7h;A 0.05 mmol
B 0.41 mmol
With Na2S2O8 buffer pH=7.0 at 70℃; for 4h;A 20 % Chromat.
B 7 % Chromat.
With sodium persulfate In water at 85℃; for 7h; Product distribution; Mechanism; other N-methylated thymines and uracils;A 0.05 mmol
B 0.41 mmol
5-(aminomethyl)-2,4(1H,3H)-pyrimidinedione
89179-86-2

5-(aminomethyl)-2,4(1H,3H)-pyrimidinedione

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

Conditions
ConditionsYield
With barium nitrite anschliessend mit wss.H2SO4;
5-(1H-[1,2,4]Triazol-3-ylsulfanylmethyl)-1H-pyrimidine-2,4-dione
94820-38-9

5-(1H-[1,2,4]Triazol-3-ylsulfanylmethyl)-1H-pyrimidine-2,4-dione

A

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

B

1H-[1,2,4]Triazole-3-thiol anion

1H-[1,2,4]Triazole-3-thiol anion

Conditions
ConditionsYield
With potassium hydroxide In water; acetonitrile at 22℃; Rate constant;
5-(Benzooxazol-2-ylsulfanylmethyl)-1H-pyrimidine-2,4-dione
84345-71-1

5-(Benzooxazol-2-ylsulfanylmethyl)-1H-pyrimidine-2,4-dione

A

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

B

Benzooxazole-2-thiol anion
75593-45-2

Benzooxazole-2-thiol anion

Conditions
ConditionsYield
With potassium hydroxide In water; acetonitrile at 22℃; Rate constant;
5-(Benzooxazol-2-ylselanylmethyl)-1H-pyrimidine-2,4-dione
84345-81-3

5-(Benzooxazol-2-ylselanylmethyl)-1H-pyrimidine-2,4-dione

A

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

B

Benzooxazole-2-selenol anion

Benzooxazole-2-selenol anion

Conditions
ConditionsYield
With potassium hydroxide In water; acetonitrile at 22℃; Rate constant;
5-(Benzothiazol-2-ylsulfanylmethyl)-1H-pyrimidine-2,4-dione
84345-70-0

5-(Benzothiazol-2-ylsulfanylmethyl)-1H-pyrimidine-2,4-dione

A

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

B

Benzothiazole-2-thiol anion
45769-89-9

Benzothiazole-2-thiol anion

Conditions
ConditionsYield
With potassium hydroxide In water; acetonitrile at 22℃; Rate constant;
5-(Benzothiazol-2-ylselanylmethyl)-1H-pyrimidine-2,4-dione
84345-75-5

5-(Benzothiazol-2-ylselanylmethyl)-1H-pyrimidine-2,4-dione

A

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

B

Benzothiazole-2-selenol anion
111686-10-3

Benzothiazole-2-selenol anion

Conditions
ConditionsYield
With potassium hydroxide In water; acetonitrile at 22℃; Rate constant;
5-(9H-Purin-6-ylsulfanylmethyl)-1H-pyrimidine-2,4-dione
84389-05-9

5-(9H-Purin-6-ylsulfanylmethyl)-1H-pyrimidine-2,4-dione

A

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

B

6-Thiopurin Anion
33426-51-6

6-Thiopurin Anion

Conditions
ConditionsYield
With potassium hydroxide In water; acetonitrile at 22℃; Rate constant;
5-(5-Phenyl-[1,3,4]oxadiazol-2-ylsulfanylmethyl)-1H-pyrimidine-2,4-dione
84345-64-2

5-(5-Phenyl-[1,3,4]oxadiazol-2-ylsulfanylmethyl)-1H-pyrimidine-2,4-dione

A

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

B

5-Phenyl-[1,3,4]oxadiazole-2-thiol anion

5-Phenyl-[1,3,4]oxadiazole-2-thiol anion

Conditions
ConditionsYield
With potassium hydroxide In water; acetonitrile at 22℃; Rate constant;
5-<<<5-(2-thienyl)-1,3,4-oxadiazol-2-yl>thio>methyl>uracil
84345-68-6

5-<<<5-(2-thienyl)-1,3,4-oxadiazol-2-yl>thio>methyl>uracil

A

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

B

5-Thiophen-2-yl-[1,3,4]oxadiazole-2-thiol anion

5-Thiophen-2-yl-[1,3,4]oxadiazole-2-thiol anion

Conditions
ConditionsYield
With potassium hydroxide In water; acetonitrile at 22℃; Rate constant;
5-(5-Thiophen-2-yl-2-thioxo-[1,3,4]oxadiazol-3-ylmethyl)-1H-pyrimidine-2,4-dione
84345-69-7

5-(5-Thiophen-2-yl-2-thioxo-[1,3,4]oxadiazol-3-ylmethyl)-1H-pyrimidine-2,4-dione

A

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

B

5-Thiophen-2-yl-[1,3,4]oxadiazole-2-thiol anion

5-Thiophen-2-yl-[1,3,4]oxadiazole-2-thiol anion

Conditions
ConditionsYield
With potassium hydroxide In water; acetonitrile at 22℃; Rate constant;
5-(5-Phenyl-2-thioxo-[1,3,4]oxadiazol-3-ylmethyl)-1H-pyrimidine-2,4-dione
84345-65-3

5-(5-Phenyl-2-thioxo-[1,3,4]oxadiazol-3-ylmethyl)-1H-pyrimidine-2,4-dione

A

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

B

5-Phenyl-[1,3,4]oxadiazole-2-thiol anion

5-Phenyl-[1,3,4]oxadiazole-2-thiol anion

Conditions
ConditionsYield
With potassium hydroxide In water; acetonitrile at 22℃; Rate constant;
5-<(1-phenyl-5-thioxo-2-tetrazolin-4-yl)methyl>uracil
84345-62-0

5-<(1-phenyl-5-thioxo-2-tetrazolin-4-yl)methyl>uracil

A

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

B

1-Phenyl-1H-tetrazole-5-thiol anion
53079-79-1

1-Phenyl-1H-tetrazole-5-thiol anion

Conditions
ConditionsYield
With potassium hydroxide In water; acetonitrile at 22℃; Rate constant;
5-<<(1-phenyl-1,2,3,4-tetrazol-5-yl)thio>methyl>uracil
84345-57-3

5-<<(1-phenyl-1,2,3,4-tetrazol-5-yl)thio>methyl>uracil

A

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

B

1-Phenyl-1H-tetrazole-5-thiol anion
53079-79-1

1-Phenyl-1H-tetrazole-5-thiol anion

Conditions
ConditionsYield
With potassium hydroxide In water; acetonitrile at 22℃; Rate constant; Mechanism; Thermodynamic data; other α-substituted thymines; ΔH(excit.), ΔS(excit.), var. pH;
5-<<(1-phenyl-1,2,3,4-tetrazol-5-yl)seleno>methyl>uracil
84345-76-6

5-<<(1-phenyl-1,2,3,4-tetrazol-5-yl)seleno>methyl>uracil

A

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

B

1-Phenyl-1H-tetrazole-5-selenol anion

1-Phenyl-1H-tetrazole-5-selenol anion

Conditions
ConditionsYield
With potassium hydroxide In water; acetonitrile at 22℃; Rate constant;
5-<<<5-(p-toluidino)-1,3,4-selenadiazolo-2-yl>seleno>methyl>uracil
84345-73-3

5-<<<5-(p-toluidino)-1,3,4-selenadiazolo-2-yl>seleno>methyl>uracil

A

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

B

5-p-Tolylamino-[1,3,4]selenadiazole-2-selenol anion

5-p-Tolylamino-[1,3,4]selenadiazole-2-selenol anion

Conditions
ConditionsYield
With potassium hydroxide In water; acetonitrile at 22℃; Rate constant;
thymin
65-71-4

thymin

A

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

B

5-methylbarbituric acid
2417-22-3

5-methylbarbituric acid

C

5,6-dihydro-5,6-dihydroxythymine
2943-56-8

5,6-dihydro-5,6-dihydroxythymine

D

N1-formyl-N2-pyruvylurea
27284-91-9

N1-formyl-N2-pyruvylurea

E

6-Hydroxydihydrothymine
13514-92-6

6-Hydroxydihydrothymine

Conditions
ConditionsYield
With air; water Quantum yield; Irradiation; var. irradiation: γ-radiolysis;
thymin
65-71-4

thymin

A

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

B

5-methylbarbituric acid
2417-22-3

5-methylbarbituric acid

C

6-Hydroxydihydrothymine
13514-92-6

6-Hydroxydihydrothymine

D

5,6-dihydroxyuracil
20433-38-9

5,6-dihydroxyuracil

Conditions
ConditionsYield
With Saline; dinitrogen monoxide In water Ambient temperature; Irradiation; Further byproducts given;
thymin
65-71-4

thymin

A

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

B

6-hydroxy-5,6-dihydrothymine
1123-21-3

6-hydroxy-5,6-dihydrothymine

C

5,6-dihydro-5,6-dihydroxythymine
2943-56-8

5,6-dihydro-5,6-dihydroxythymine

D

6-Hydroxydihydrothymine
13514-92-6

6-Hydroxydihydrothymine

Conditions
ConditionsYield
With 1H-4(5)-nitroimidazole In water Irradiation; pH=7.0+/-0.1; Further byproducts given;
thymin
65-71-4

thymin

A

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

B

N1-formyl-N2-pyruvylurea
27284-91-9

N1-formyl-N2-pyruvylurea

C

5,6-dihydroxyuracil
20433-38-9

5,6-dihydroxyuracil

Conditions
ConditionsYield
With tempol; Saline; dinitrogen monoxide In water Ambient temperature; Irradiation;
thymin
65-71-4

thymin

A

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

B

5-methylbarbituric acid
2417-22-3

5-methylbarbituric acid

C

6-hydroxy-5,6-dihydrothymine
1123-21-3

6-hydroxy-5,6-dihydrothymine

D

6-Hydroxydihydrothymine
13514-92-6

6-Hydroxydihydrothymine

E

5,6-dihydrothymine
696-04-8

5,6-dihydrothymine

Conditions
ConditionsYield
nickel(II) sulphate Product distribution; Irradiation; degradation in the presence and absence of different Ni(II) compounds; different atmospheres;
thymin
65-71-4

thymin

A

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

B

5-methylbarbituric acid
2417-22-3

5-methylbarbituric acid

C

6-hydroxy-5,6-dihydrothymine
1123-21-3

6-hydroxy-5,6-dihydrothymine

E

6-Hydroxydihydrothymine
13514-92-6

6-Hydroxydihydrothymine

F

5,6-dihydrothymine
696-04-8

5,6-dihydrothymine

Conditions
ConditionsYield
With ammonium ferric sulfate In water Product distribution; γ-radiolysis, absence of NH4Fe(SO4)2, in presence of NH4Fe(SO4)2 and t-butyl alcohol;
thymin
65-71-4

thymin

A

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

B

5-methylbarbituric acid
2417-22-3

5-methylbarbituric acid

C

N1-formyl-N2-pyruvylurea
27284-91-9

N1-formyl-N2-pyruvylurea

D

6-Hydroxydihydrothymine
13514-92-6

6-Hydroxydihydrothymine

E

5,6-dihydroxyuracil
20433-38-9

5,6-dihydroxyuracil

F

5,6-dihydrothymine
696-04-8

5,6-dihydrothymine

Conditions
ConditionsYield
With Saline In water Product distribution; Mechanism; Ambient temperature; Irradiation; promotion effect of addition of 2,2,6,6-tetramethylpiperidine-1-oxyls, influence of various saturation gases;
thymin
65-71-4

thymin

A

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

B

6-hydroxy-5,6-dihydrothymine
1123-21-3

6-hydroxy-5,6-dihydrothymine

C

5,6-dihydro-5,6-dihydroxythymine
2943-56-8

5,6-dihydro-5,6-dihydroxythymine

D

6-Hydroxydihydrothymine
13514-92-6

6-Hydroxydihydrothymine

E

5,6-dihydrothymine
696-04-8

5,6-dihydrothymine

Conditions
ConditionsYield
With (60)Co γ-ray irradiation; 1H-4(5)-nitroimidazole In water Mechanism; Irradiation; var. nitro compounds, pH=7.0+/-0.1;
thymin
65-71-4

thymin

A

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

B

6-hydroxy-5,6-dihydrothymine
1123-21-3

6-hydroxy-5,6-dihydrothymine

C

6-Hydroxydihydrothymine
13514-92-6

6-Hydroxydihydrothymine

D

5,6-dihydrothymine
696-04-8

5,6-dihydrothymine

Conditions
ConditionsYield
With 1H-4(5)-nitroimidazole In water Irradiation; pH=7.0+/-0.1; Further byproducts given;
thymin
65-71-4

thymin

A

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

B

5,6-dihydro-5,6-dihydroxythymine
2943-56-8

5,6-dihydro-5,6-dihydroxythymine

C

N1-formyl-N2-pyruvylurea
27284-91-9

N1-formyl-N2-pyruvylurea

D

6-Hydroxydihydrothymine
13514-92-6

6-Hydroxydihydrothymine

E

5,6-dihydrothymine
696-04-8

5,6-dihydrothymine

Conditions
ConditionsYield
With water Quantum yield; Irradiation; var. irradiation: γ-radiolysis;
thymin
65-71-4

thymin

A

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

B

1-(6'-hydroxy-5',6'-dihydrothymin-5'-yl)thymine (5a) and 1-(5'-hydroxy-5',6'-dihydrothymin-6'-yl)thymine
94705-75-6, 95180-99-7, 142237-27-2

1-(6'-hydroxy-5',6'-dihydrothymin-5'-yl)thymine (5a) and 1-(5'-hydroxy-5',6'-dihydrothymin-6'-yl)thymine

C

1-(5'-hydroxy-5',6'-dihydrothymin-6'-yl)thymine

1-(5'-hydroxy-5',6'-dihydrothymin-6'-yl)thymine

D

5,6-dihydrothymine
696-04-8

5,6-dihydrothymine

Conditions
ConditionsYield
With sodium chloride In water for 5h; galvanostatic electrolysis, Pt electrodes; Further byproducts given;A 4.0 % Chromat.
B 66.0 % Chromat.
C 15.8 % Chromat.
D 9.1 % Chromat.
thymin
65-71-4

thymin

A

5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

B

6-Hydroxydihydrothymine
13514-92-6

6-Hydroxydihydrothymine

C

5,6-dihydroxyuracil
20433-38-9

5,6-dihydroxyuracil

D

5,6-dihydrothymine
696-04-8

5,6-dihydrothymine

Conditions
ConditionsYield
With Saline In water Ambient temperature; Irradiation; Further byproducts given;
5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

5-chloromethyluracil
3590-48-5

5-chloromethyluracil

Conditions
ConditionsYield
With thionyl chloride In 1,4-dioxane for 4h; Heating / reflux;100%
With hydrogenchloride at 20 - 35℃;99%
With hydrogenchloride at 20℃; for 2h;71%
5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

l-cysteine hydrochloride
52-89-1

l-cysteine hydrochloride

S-[(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-5-yl)methyl]-L-cysteine hydrochloride

S-[(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-5-yl)methyl]-L-cysteine hydrochloride

Conditions
ConditionsYield
With hydrogenchloride at 50℃; for 48h;94%
5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

isopropyl alcohol
67-63-0

isopropyl alcohol

5-isopropoxymethyluracil
143424-32-2

5-isopropoxymethyluracil

Conditions
ConditionsYield
With hydrogenchloride for 4h; Heating;93.5%
5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

2,4-dioxo-1,2,3,4-tetrahydropyrimidine-5-carbaldehyde
1195-08-0

2,4-dioxo-1,2,3,4-tetrahydropyrimidine-5-carbaldehyde

Conditions
ConditionsYield
With dipotassium peroxodisulfate; silver nitrate In water at 40℃; for 0.583333h;93%
With dipotassium peroxodisulfate; silver nitrate In water84%
With dipotassium peroxodisulfate; silver nitrate In water at 40 - 45℃;83%
5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

trityl chloride
76-83-5

trityl chloride

5-(triphenylmethoxymethyl)uracil
53910-86-4

5-(triphenylmethoxymethyl)uracil

Conditions
ConditionsYield
With pyridine at 95 - 100℃; for 3h;93%
5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

benzene
71-43-2

benzene

5-benzyluracil
18493-83-9

5-benzyluracil

Conditions
ConditionsYield
With trifluoroacetic acid at 130℃; for 0.333333h; Sealed tube;84%
With trifluoroacetic acid at 140℃; for 14h;82%
5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

tert-butylchlorodiphenylsilane
58479-61-1

tert-butylchlorodiphenylsilane

5-(tert-butyldiphenylsiloxy)methyl-1H,3H-pyrimidine-2,4-dione
1234711-50-2

5-(tert-butyldiphenylsiloxy)methyl-1H,3H-pyrimidine-2,4-dione

Conditions
ConditionsYield
With 1H-imidazole In tetrahydrofuran at 20℃;84%
With 1H-imidazole In N,N-dimethyl-formamide at 20℃; for 24h; Inert atmosphere;81%
5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

i-Amyl alcohol
123-51-3

i-Amyl alcohol

5-isopentoxymethyluracil

5-isopentoxymethyluracil

Conditions
ConditionsYield
With hydrogenchloride at 100℃; for 3h;83%
5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

2,6-diethylphenol
1006-59-3

2,6-diethylphenol

5-(3,5-diethyl-4-hydroxybenzyl)uracil
84876-24-4

5-(3,5-diethyl-4-hydroxybenzyl)uracil

Conditions
ConditionsYield
With hydrogenchloride for 5h; Heating;82%
5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

benzoyl chloride
98-88-4

benzoyl chloride

bis-N,O-benzoyl-5-(hydroxymethyl)uracil
378750-51-7

bis-N,O-benzoyl-5-(hydroxymethyl)uracil

Conditions
ConditionsYield
In pyridine; acetonitrile82%
5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

ethyl bromoacetate
105-36-2

ethyl bromoacetate

ethyl 2-(5-hydroxymethyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)acetate
944249-69-8

ethyl 2-(5-hydroxymethyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)acetate

Conditions
ConditionsYield
With potassium carbonate In N,N-dimethyl-formamide at 20℃; for 16h;82%
Stage #1: 5-hydroxymethyl uracil With potassium carbonate In N,N-dimethyl-formamide at 20℃; for 1h; Inert atmosphere;
Stage #2: ethyl bromoacetate In N,N-dimethyl-formamide Inert atmosphere;
30%
5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

urea
57-13-6

urea

N-[(uracil-5-yl)methyl]urea
89533-46-0

N-[(uracil-5-yl)methyl]urea

Conditions
ConditionsYield
With hydrogenchloride In water at 80℃; for 4h;82%
5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

pentan-1-ol
71-41-0

pentan-1-ol

5-pentoxymethyluracil
133635-46-8

5-pentoxymethyluracil

Conditions
ConditionsYield
With hydrogenchloride a) r.t., 15 min, b) 100 deg C, 3h;81%
5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

ethylene glycol
107-21-1

ethylene glycol

5-<(2-hydroxyethoxy)methyl>uracil
88459-62-5

5-<(2-hydroxyethoxy)methyl>uracil

Conditions
ConditionsYield
With hydrogenchloride for 0.0833333h; Heating;81%
5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

(propa-1,2-dien-1-yloxy)cyclohexane

(propa-1,2-dien-1-yloxy)cyclohexane

(S)-1-(1-(cyclohexyloxy)allyl)-5-(hydroxymethyl)pyrimidine-2,4(1H,3H)-dione

(S)-1-(1-(cyclohexyloxy)allyl)-5-(hydroxymethyl)pyrimidine-2,4(1H,3H)-dione

Conditions
ConditionsYield
With pyridine; potassium phosphate; tris-(dibenzylideneacetone)dipalladium(0); (1R,2R)-diamino-(1N,2N)-bis(1'-diphenylphosphino-2-naphthoyl)cyclohexane at 0℃; for 7h; Inert atmosphere; enantioselective reaction;79.6%
5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

benzyl alcohol
100-51-6

benzyl alcohol

benzyl hydroxymethyl uridine
7295-02-5

benzyl hydroxymethyl uridine

Conditions
ConditionsYield
With hydrogenchloride for 1h; Heating;79%
With acid
With hydrogenchloride Reflux;
5-hydroxymethyl uracil
4433-40-3

5-hydroxymethyl uracil

1,2,3,5-tetraacetylribose
13035-61-5

1,2,3,5-tetraacetylribose

2′,3′,5′-tri-O-acetyl-5-hydroxymethyluridine
285549-57-7

2′,3′,5′-tri-O-acetyl-5-hydroxymethyluridine

Conditions
ConditionsYield
With benzenesulfonamide; trimethylsilyl trifluoromethanesulfonate In acetonitrile at 75℃; for 2h; Substitution;79%

4433-40-3Relevant articles and documents

-

Johnson,Litzinger

, p. 1940 (1936)

-

Bioorthogonal Chemical Signature Enabling Amplified Visualization of Cellular Oxidative Thymines

Bai, Min,Cao, Xiaowen,Chen, Feng,Xue, Jing,Zhao, Yue,Zhao, Yongxi

, p. 10495 - 10501 (2021)

Cellular oxidative thymines, 5-hydroxymethyluracil (5hmU) and 5-formyluracil (5fU), are found in the genomes of a diverse range of organisms, the distribution of which profoundly influence biological processes and living systems. However, the distribution of cellular oxidative thymines has not been explored because of lacking both specific bioorthogonal labeling and sensitivity methods for single-cell analysis. Herein, we report a bioorthogonal chemical signature enabling amplified visualization of cellular oxidative thymines in single cells. The synthesized ATP-γ-alkyne, an ATP analogue with bioorthogonal tag modified on γ-phosphate can be specifically linked to cellular 5hmU by chemoenzymatic labeling. DNA with 5-alkynephosphomethyluracil were then clicked with azide (N3)-modified 5hmU-primer. Identification of 5fU is based on selective reduction from 5fU to 5hmU, subsequent chemoenzymatic labeling of the newly generated 5hmU, and cross-linking with N3-modified 5fU-primer via click chemistry. Then, all of the 5hmU and 5fU sites are encoded with respective circularized barcodes. These barcodes are simultaneously amplified for multiplexed single-molecule imaging. The above two kinds of barcodes can be simultaneously amplified for differentiated visualization of 5hmU and 5fU in single cells. We find these two kinds of cellular oxidative thymines are spatially organized in a cell-type-dependent style with cell-to-cell heterogeneity. We also investigate their multilevel subcellular information and explore their dynamic changes during cell cycles. Further, using DNA sequencing instead of fluorescence imaging, our proposed bioorthogonal chemical signature holds great potential to offer the sequence information of these oxidative thymines in cells and may provide a reliable chemical biology approach for studying the whole-genome oxidative thymines profiles and insights into their functional role and dynamics in biology.

BICYCLIC KINASE INHIBITORS AND USES THEREOF

-

Paragraph 613; 618, (2021/11/06)

The invention relates to kinase inhibitors, in particular inhibitors of protein kinases including the SIK-family, CSF1R, HCK, TEK-family, BRK, ABL, KIT and/or their mutants. Although structurally similar to other bicyclic kinase inhibitors, the kinase inhibitors of the invention are distinctive; possessing a particular class of heterocyclic moiety. Such kinase inhibitors can display one or more certain properties distinct to their structurally similar kinase inhibitors. The kinase inhibitors of the invention or pharmaceutical compositions comprising them may be used in the treatment of a disorder or condition, such as a proliferative disorder, for example, a leukaemia or solid tumour. In particular, these and other structurally related kinase inhibitors may be used in the treatment of a proliferative disorder - such as a mixed phenotype acute leukaemia (MPAL) - characterised by (inter-alia) the presence of MEF2C protein, a human chromosomal translocation at 11q23, and/or a KMT2A fusion oncoprotein. The kinase inhibitors or pharmaceutical compositions of the invention may be used topically to modulate skin pigmentation in a subject, for example to impart UV protection and reduce skin cancer risk.

FGFR4 Inhibitor. Compositions and their use in pharmaceutical preparations

-

Paragraph 0057-0060, (2021/10/27)

The invention provides 3 inhibitor which takes 4 - 4 dihydropyrimidine [5 - d,2] pyrimidine - (1H) FGFR4 ketone as a mother nucleus and has a covalent structure. The examples give 9 specific compounds and kinase inhibitory activity testing of these 9 compounds, wherein LX08 for FGFR4 kinase inhibitory activity is only 7 nm, lower than FIIN - 2 of the active control, and potential application prospects. In addition, by subjecting the synthesized compound to MALDI-TOF mass spectrometry, we found that compounds of LX01, LX05, LX06, LX07, LX08 are covalently bound to FGFR4 of Cys552, cannot covalently bind FGFR4 of Cys477, and LX09 are FGFR4 inhibitors which can be covalently bound to the two cysteines Cys552 and Cys477 in FGFR4.

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