E. Ramachandran et al. / European Journal of Medicinal Chemistry 50 (2012) 405e415
413
18.05; S, 10.33. Found (%): C, 61.87; H, 4.49; N, 18.09; S, 10.37. IR
(KBr, cmꢁ1): 3317(ms)
(NH); 1649(s) (C]O); 1550(s) (C]
N) þ (C]C); 811(m) (C]S). UVevis (DMSO), lmax (nm): 279, 373
(m / m*, n / m*). 1H NMR (DMSO-D6);
12.16 (s, N(1)H); 11.76 (s,
N(3)H); 8.61 (s, 1H, C(3)H); 8.21(s, 1H, C(14)H); 8.15 (s, 1H, N(4)
0.05 mmol). Dark red coloured crystals obtained were found to be
suitable for X-ray diffraction. Yield: 84%. MP: 286e288 ꢀC, Anal.
calcd. for C34H38CoN9O9S2 (%): C, 48.62; H, 4.56; N, 15.02; S, 7.64.
Found (%): C, 48.57; H, 4.61; N, 15.23; S, 7.68 IR (KBr, cmꢁ1):
n
n
n
n
n
d
d
d
d
3321(ms)
UVevisible (solvent MeOH, nm): 278 (ILCT); 433,456 (LMCT). 1H
NMR (DMSO-D6); 13.91(s, N(1)H); 8.98(s, 1H, C(3)H); 8.96(s,
n(NH); 1625(s) n(C]O); 1503(s) n(C]N); 717(m) n(CeS).
H); 7.67e7.98 (m, 6H, aromatic); 3.03 (s, 3H, C(17)H).
d
d
d
4.2.3. 2-Oxo-1,2-dihydrobenzo[h]quinoline-3-carbaldehyde N-
ethylthiosemicarbazone (H2L3)
2H, N(4)H); 8.95(s, 1H, C(14)H); 7.61e8.03 (m, 6H, aromatic); 3.37
(q, 2H, C(16)H); 1.15(t, 3H, C(17)H).
It was prepared using the same procedure as described for H2L1
with 4-ethyl- 3-thiosemicarbazide (1.19 g, 0.01 mol) and 2-oxo-1,2-
dihydro-benzo[h]quinoline-3-carbaldehyde (2.23 g, 0.01 mol). An
yellow colour product was obtained. Yield: 82%. MP: 259e260 ꢀC,
Anal. calcd. for C17H16N4OS (%): C, 62.94; H, 4.97; N, 17.27; S, 9.89.
Found(%): C, 62.85; H, 4.87; N,17.21; S, 9.78. IR (KBr, cmꢁ1): 3327(ms)
4.2.8. [Co(HL4)2]NO3$4H2O (4)
It was prepared using the same procedure as described for 1
with H2L4 (186 mg, 0.05 mmol) and Co(NO3)2$6H2O (0.146 g,
0.05 mmol). Dark red coloured crystalline powder obtained. Yield:
89%. MP: 299e300 ꢀC, Anal. calcd. for C42H38CoN9O9S2 (%): C, 53.90;
H, 4.09; N, 13.47; S, 6.85. Found (%):C, 53.82; H, 4.17; N, 13.36; S,
n
(NH); 1648(s)
UVevis (DMSO), lmax (nm): 295, 359 (m / m*, n / m*). 1H NMR
(DMSO-D6); 12.43 (s, N(1)H); 11.67 (s, N(3)H); 8.91 (s,1H, C(3)H);
8.81(s,1H,C(14)H);8.35(s,1H,N(4)H);7.65e8.01(m, 6H,aromatic);
3.34 (q, 2H, C(16)H); 1.21 (t, 3H, C(17)H).
n
(C]O); 1535(s)
n
(C]N) þ
n(C]C); 840(m) n(C]S).
6.73. IR (KBr, cmꢁ1): 3255(ms)
(C]N); 745(m)
(ILCT); 441,463 (LMCT). 1H NMR (DMSO-D6);
n
(NH); 1622(s)
(CeS). UVevisible (solvent MeOH, nm): 277
13.7212.05 (s,
n(C]O); 1490(s)
d
d
d
n
n
d
d
1H,N(1)H); 9.87 (s, 1H, N(4)H); 8.84 (s, 1H,C(1)H); 8.46 (s, 1H, C(6)
H); 7.98e7.95 (m, 11H, aromatic).
4.2.4. 2-Oxo-1,2-dihydro-benzo[h]quinoline-3-carbaldehyde N-
phenylthiosemicarbazone (H2L4)
4.3. Single-crystal X-ray diffraction studies
It was prepared using the same procedure as described for H2L1
with 4-phenyl-3-thiosemicarbazide (1.67 g, 0.01 mol) and 2-oxo-
1,2-dihydro-benzo[h]quinoline-3-carbaldehyde (2.23 g, 0.01 mol).
An yellow colour product was obtained. Yield: 91%. MP:
245e246 ꢀC, Anal. calcd. for C21H16N4OS (%): C, 67.72; H, 4.33; N,
15.04; S, 8.61. Found (%): C, 67.64; H, 4.47; N, 15.19; S, 8.58. IR (KBr,
Single crystal X-ray diffraction data of 2 and 3 were collected at
100 K on an Oxford Xcalibur Eos (Mova) Diffractometer with X-ray
generator operating at 50 kV and 1 mA, using Mo K
a radiation
(l
¼ 0.7107 Å) [43]. The structures were solved and refined using
SHELX97 module in the program suite WinGX [44,45]. The
molecular diagrams were generated using ORTEP-3 and the
packing diagrams were generated using Mercury 2.3. The
geometric calculations were carried out by PARST95 and PLATON
[46,47].
cmꢁ1): 3293(ms)
C); 845(m) (C]S). UVevis (DMSO), lmax (nm): 279, 373, 392
(m / m*, n / m*). 1H NMR (DMSO-D6);
12.01 (s, N(1)H); 11.87 (s,
N(3)H); 10.03 (s, 1H, C(3)H); 8.85(s, 1H, C(14)H); 8.39 (s, 1H, N(4)
n
(NH); 1652(s)
n(C]O); 1530(s)
n
(C]N) þ
n(C]
n
d
d
d
d
H); 7.35e7.98 (m, 11H, aromatic).
4.4. DNA binding studies
4.2.5. [Co(HL1)2]NO3$4H2O (1)
A warm methanolic solution (20 mL) containing H2L1 (0.148 g,
0.05 mmol) was added to a methanolic solution (20 mL) of Co(N-
O3)2$6H2O (0.146 g, 0.05 mmol). The resulting red colour solution
was refluxed for an hour. Dark red coloured crystalline powder was
obtained on slow evaporation. They were filtered off, washed with
cold methanol, and dried under vacuum. Yield: 83%. MP:
280e281 ꢀC, Anal. calcd. for C30H30CoN9O9S2 (%): C, 45.98; H, 3.86;
N, 16.09; S, 8.18. Found (%): C, 45.83; H, 3.92; N, 16.01; S, 8.07. IR
4.4.1. Titration experiments
All of the experiments involving the binding of compounds with
CT-DNA were carried out in double distilled water with
tris(hydroxymethyl)-aminomethane (Tris,
5 mM) and sodium
chloride (50 mM) and adjusted to pH 7.2 with hydrochloric acid. A
solution of CT-DNA in the buffer gave a ratio of UV absorbance of
about 1.9 at 260 and 280 nm, indicating that the DNA was suffi-
ciently free of protein. The DNA concentration per nucleotide was
determined by absorption spectroscopy using the molar extinction
coefficient value of 6600 Mꢁ1 cmꢁ1 at 260 nm. The compounds
were dissolved in a mixed solvent of 5% DMSO and 95% TriseHCl
buffer for all of the experiments. Absorption titration experi-
(KBr, cmꢁ1): 3293(ms)
754(m) (CeS). UVevisible (solvent MeOH, nm): 279 (ILCT);
431,455 (LMCT). 1H NMR (DMSO-D6);
13.94(s, N(1)H); 8.99 (s,
2H, N(4)H); 8.97(s, 1H, C(3)H); 8.86(s, 1H, C(14)H); 7.43e8.04 (m,
6H, aromatic).
n(NH); 1628(s) n(C]O); 1482(s) n(C]N);
n
d
d
d
ments were performed with
compounds (25 M) while gradually increasing the concentration
of DNA (5e25 M). While measuring the absorption spectra, an
a fixed concentration of the
m
m
4.2.6. [Co(HL2)2]NO3$4H2O (2)
It was prepared using the same procedure as described for 1 with
H2L2 (0.155 g, 0.05 mmol) and Co(NO3)2$6H2O (146 mg, 0.05 mmol).
Dark red coloured crystals obtained were found to be suitable for X-
ray diffraction. Yield: 79%. MP: 292e293 ꢀC, Anal. calcd. for
C32H34CoN9O9S2 (%): C, 47.35; H, 4.22; N, 15.53; S, 7.91. Found (%): C,
equal amount of DNA was added to both the test solution and the
reference solution to eliminate the absorbance of DNA itself. The
same experimental procedure was followed for emission studies
also. Further support for the complexes binding to DNA via inter-
calation is given through emission quenching experiments. DNA
was pretreated with ethidium bromide for 30 min. Then the test
solutions were added to this mixture of EB-DNA, and the change in
the fluorescence intensity was measured. The excitation and the
emission wavelength were 515 nm and 603e607 nm, respectively.
47.49; H, 4.27; N, 15.62; S, 7.85. IR (KBr, cmꢁ1): 3359(ms)
1624(s) (C]O); 1511(s) (C]N); 729(m)
(solvent MeOH, nm): 282 (ILCT); 433,456 (LMCT). 1H NMR (DMSO-
D6); 13.92(s, N(1)H); 8.99(s, 1H, C(3)H); 8.97(s, 2H, N(4)H);
n(NH);
n
n
n(CeS).UVevisible
d
d
d
8.95(s, 1H, C(14)H); 7.62e8.04 (m, 6H, aromatic);
4.4.2. Viscosity measurements
4.2.7. [Co(HL3)2]NO3$4H2O (3)
It was prepared using the same procedure as described for 1
with H2L3 (0.162 g, 0.05 mmol) and Co(NO3)2$6H2O (146 mg,
Viscosity experiments were carried out using a Schott Gerate
AVS 310 automated viscometer that was thermo stated at 25 ꢀC in
a constant temperature bath. The lengthening of the DNA helix has