Seley et al.
4.30-4.66 (m, 6 H), 5.69 (d, 6.0 Hz, 1 H), 7.03 (d, 1.2 Hz, 1 H),
7.11 (dd, 2.0 Hz, 7.8 Hz, 2 H), 7.21-7.42 (m, 13 H), 7.46 (d,
1.2 Hz, 1 H); 13C NMR (CDCl3) δ 60.3, 69.7, 72.3, 72.6, 73.7,
76.5, 81.6, 82.6, 88.8, 121.9, 127.8, 127.9, 128.0, 128.2, 128.5,
128.6, 136.6, 137.1, 137.2, 137.5. Anal. Calcd for C29H29-
IN2O4: C, 58.40; H, 4.90; N, 4.70; I, 21.28. Found: C, 58.29;
H, 4.93; N, 4.61; I, 21.06.
5-Iodo-1,3-dimethyluracil (13). Dimethyl sulfate (13.0
mL, 137 mmol) was added dropwise to a stirring slurry of
5-iodoracil 12 (14.9 g, 62.6 mmol) and NaOH (7.4 g, 156 mmol)
in H2O (100 mL) at 0 °C.34 The mixture was heated under
reflux for 2 h, cooled to rt, and extracted with CH2Cl2 (3 ×
200 mL). The organic layers were combined, washed with brine
(300 mL), and dried over MgSO4. The solvent was removed
under reduced pressure to give a white solid, which, following
recrystallization in hot EtOH, gave 13 as a white crystalline
solid (10.6 g, 63%): mp 224 °C (Aldrich, 225 °C); 1H NMR
(CDCl3) δ 3.40 (s, 3 H), 3.41 (s, 3 H), 7.62 (s, 1 H); 13C NMR
(CDCl3) 29.5, 37.3, 67.1, 147.2, 151.2, 160.2.
2,3-Dibenzyloxy-5-benzyloxymethyl-1-(imidazol-3-yl)-
1-â-D-ribofuranose (14). EtMgBr (3.0 M in ethyl ether, 0.62
mL, 1.84 mmol) was added dropwise to a solution of 11 (1.0 g,
1.67 mmol) in anhydrous CH2Cl2 (15 mL) at rt under Ar. The
resulting solution was stirred at rt for 2 h, followed by dropwise
addition of trimethyltin chloride (1.0 M in CH2Cl2, 2.0 mL, 2.0
mmol) at rt.35 The mixture was allowed to stir at rt for 18 h
and then quenched with water. The organic layer was sepa-
rated and the aqueous layer washed with CH2Cl2 (2 × 20 mL).
The organic extracts were combined and washed sequentially
with saturated KF solution (30 mL) to form insoluble organotin
fluoride and then brine (50 mL). The organic layer was dried
over MgSO4 and the solvent removed to afford 14 as a colorless
syrup (714 mg, 91%): 1H NMR (CDCl3) δ 3.48 (dd, 2.4 Hz, 10.8
Hz, 1 H), 3.62 (dd, 3.0 Hz, 10.8 Hz, 1 H), 4.03 (dd, 2.8 Hz, 4.8
Hz, 1 H), 4.10 (br t, 5.4 Hz, 1 H), 4.29 (dd, 2.8 Hz, 5.4 Hz, 1
H), 4.36-4.61 (m, 6 H), 5.74 (d, 6.4 Hz, 1 H), 6.98 (d, 6.8 Hz,
2 H), 7.10-7.32 (m, 15 H), 7.59 (s, 1 H); 13C NMR (CDCl3) δ
69.5, 72.0, 72.3, 73.3, 76.4, 81.4, 82.1, 88.5, 116.1, 127.3, 127.4,-
127.5, 127.6, 127.7, 128.1, 129.3, 135.7, 136.5, 137.0, 137.1.
5-(Dihydroxyboryl)-2,4-bis(benzyloxy)pyrimidine (20).39
N-Butyllithium (1.3 M in hexane, 2.5 mL, 3.2 mmol) was
dropwise added over a 1 h period to a solution of 19 (1.0 g, 2.7
mmol) and B(OiPr)3 (1.0 mL, 5.3 mmol) in a mixture of
anhydrous THF and toluene (1:4 volume ratio, 50 mL total)
at -78 °C under Ar.39 The mixture was stirred for an
additional 18 h at rt, followed by addition of dilute HCl (1 M).
The reaction mixture was evaporated under reduced pressure.
The residue was then treated with H2O (50 mL) and extracted
with CH2Cl2 (3 × 30 mL). The organic extracts were combined,
washed with brine (50 mL), and dried over MgSO4, and the
solvent was removed under reduced pressure to give 20 as a
white powder (8.8 g, 95%). Spectral data are in agreement with
the literature:39 1H NMR (CDCl3) δ 5.46 (s, 4 H), 7.25-7.48
(m, 10 H), 8.72 (s, 1H); 13C NMR (CDCl3) δ 118.5, 160.1, 161.4,
165.9.
2,3-Dibenzyloxy-5-benzyloxymethyl-1-[4-(2,4-dibenzyl-
oxy-5-pyrimidinyl)imidazol-1-yl]-â-D-ribofuranose (21). A
mixture of 11 (1.7 g, 2.9 mmol) and Pd(PPh3)4 (185 mg, 0.16
mmol) in 40 mL of 1,2-dimethoxyethane (DME) was stirred
at rt under Ar for 10 min. To this mixture was added
5-(dihydroxyboryl)-2,4-bis(benzyloxy)pyrimidine (20) (3.2 mmol
in 20 mL of DME).40 Saturated aqueous NaHCO3 (40 mL) was
added and the mixture refluxed under Ar for 4 h. The solution
was cooled to rt and the DME layer separated and set aside.
The aqueous layer was then extracted with EtOAc (3 × 50
mL), and the organic extracts were combined with the DME
layer, washed with brine (100 mL), and dried over MgSO4. The
solvent was removed to give a pale brown syrup. Column
chromatography eluting with 2% EtOH in CH2Cl2 gave 21 as
a colorless syrup (1.54 g, 70%): 1H NMR (CDCl3) δ 3.45 (dd,
3.0 Hz, 10.6 Hz, 1 H), 3.56 (dd, 3.3 Hz, 10.6 Hz, 1 H), 4.01-
4.48 (m, 1 H), 4.11 (br t, 5.5 Hz, 1 H), 4.31-4.62 (m, 7 H),
5.42-5.52 (m, 4 H), 5.78 (d, 6.0 Hz, 1 H), 7.15-7.54 (m, 26
H), 7.73 (s, 1 H), 9.15 (s, 1 H); 13C NMR (CDCl3) δ 68.3, 68.9,
69.4, 72.1, 72.5, 73.1, 76.5, 81.5, 82.1, 88.7, 109.5, 115.6, 127.3,
127.6, 127.8, 127.9, 128.3, 134.0, 135.6, 136.1, 136.5, 136.7,
137.2, 137.3, 155.9, 162.7, 166.0. Anal. Calcd for C47H44N4O6‚
1H2O: C, 72.48; H, 5.95; N, 7.19. Found: C, 72.82; H, 5.75; N,
7.03.
5-Tri-n-butylstannyl-1,3-dimethyluracil (15). A mixture
of 5-iodo-1,3-dimethyluracil (13) (2.66 g, 10.0 mmol), bis-
(tributyltin) (10.1 mL, 20.0 mmol), and PdCl2(PPh3)4 (280 mg,
0.40 mmol) in anhydrous toluene (300 mL) was heated under
Ar at 90 °C for 4 h.35 The mixture was filtered through a pad
of alumina, the solvent removed under reduced pressure, and
the residue purified by column chromatography (silica gel
pretreated with 5% triethylamine in hexanes), eluting with
2% triethylamine in hexanes, to afford 5-tri-n-butylstannyl-
1,3-dimethyluracil (15) as a colorless oil (2.7 g, 62%): 1H NMR
(CDCl3) δ 0.88 (t, 7.2 Hz, 9 H), 1.03 (t, 8.4 Hz, 6 H), 1.31 (q,
7.6 Hz, 6 H), 1.50 (q, 8.4 Hz, 6 H), 3.32 (s, 3 H), 3.36 (s, 3 H),
6.87 (s, 1 H); 13C NMR (CDCl3) δ 9.9, 13.8, 27.4, 27.7, 29.1,
36.8, 111.0, 146.7, 152.4, 166.5.
2,4-Dibenzyloxy-5-bromopyrimidine (19).39 A stirred
solution of benzyl alcohol (13.4 mL, 129 mmol) in anhydrous
toluene (140 mL) was treated with NaH (60% in mineral oil,
4.84 g, 121 mmol) under Ar. The mixture was warmed to 50
°C to facilitate the formation of the sodium salt and stirred
until all signs of gas evolution had subsided.39 The suspension
was cooled and 5-bromo-2,4-dichloropyrimidine36 (9.1 g, 40
mmol) added dropwise, while maintaining the temperature
below 25 °C. After being stirred for 18 h at rt, the reaction
mixture was filtered to remove precipitated NaCl and thor-
oughly washed with toluene. The filtrate was then evaporated
under reduced pressure to give an oil which solidified upon
cooling. The crude solid was then recrystallized in EtOH to
afford 19 as a white crystalline solid (16 g, 91%): mp 88-90
°C (lit.39 mp 89-91 °C); 1H NMR (CDCl3) δ 5.40 (s, 2 H), 5.48
(s, 2 H), 7.32-8.48 (m, 10 H), 8.35 (s, 1 H); 13C NMR (CDCl3)
δ 69.1, 69.7, 98.4, 127.7, 128.0, 128.1, 128.2, 128.5, 128.6, 135.5,
136.1, 159.4, 159.5, 163.5, 166.2.
1-[4-(Uracil-5-yl)imidazol-1-yl]-1-â-D-ribofuranose-2,3,5-
triol (5). A mixture of 21 (200 mg, 0.26 mmol), palladium (10%
Pd/C, 200 mg), and ammonium formate (300 mg) in EtOH (50
mL) was heated under reflux for 2 h.10 The solvent was then
removed under reduced pressure and the residue purified by
column chromatography eluting with EtOAc/acetone/EtOH/
H2O (7:1:1:0.5) to give 5 as a white crystalline solid (71 mg,
88%): mp 239-242 °C; 1H NMR (DMSO-d6) δ 3.49 (dd, 4.5
Hz, 12.3 Hz, 1 H), 3.55 (dd, 5.0 Hz, 12.3 Hz, 1 H), 3.86 (br d,
3.3 Hz, 1 H), 4.0 (dd, 4.0 Hz, 6.0 Hz, 1 H), 4.11 (br t, 5.1 Hz,
1 H), 5.00 (br t, 4.8 Hz, 1 H), 5.14 (br d, 3.9 Hz, 1 H), 5.36 (br
d, 5.7 Hz, 1 H), 5.52 (d, 6.0 Hz, 1 H), 7.67 (s, 1 H), 7.81 (s, 1
H), 7.86 (s, 1 H). 11.0 (s, 1 H), 112.2 (s, 1 H); 13C NMR (DMSO-
d6) δ 61.3, 70.3, 75.1, 85.2, 89.3, 107.3, 114.5, 133.5, 135.7,
136.3, 150.5, 162.2. Anal. Calcd for C12H14N4O6‚0.6H2O: C,
44.88; H, 4.80; N, 17.38. Found: C, 45.14; H, 4.60; N, 17.03.
1-[4-(2,4-Diaminopyrimidin-5-yl)imidazol-1-yl]-1-â-D-ri-
bofuranose-2,3,5-triol (4). In a Parr bomb, anhydrous am-
monia gas was bubbled in an anhydrous methanolic solution
of 21 (1.0 g, 1.3 mmol in 50 mL of MeOH) at -78 °C for 5 min.
The bomb was sealed and heated at 170 °C for 96 h. After the
mixture was cooled to 0 °C, the solvent was removed under
reduced pressure. The residue was purified by column chro-
matography eluting with 8% EtOH in CH2Cl2 to give 22 (398
mg, 52%) as a colorless syrup, which was used directly in the
next step: 1H NMR (CDCl3) δ 3.54 (dd, 2.4 Hz, 10.4 Hz, 1 H),
3.70 (dd, 2.8 Hz, 10.4 Hz, 1 H), 4.09 (dd, 2.5 Hz, 4.5 Hz, 1 H),
4.16 (br t, 4.8 Hz, 1 H), 4.33-4.36 (m, 1 H), 4.39 (d, 12.0, 1 H),
4.47-4.68 (m, 6 H), 5.06 (br s, 2 H), 5.66 (br s, 2 H), 5.74 (d,
6.4 Hz, 1 H), 7.01 (s, 1 H), 7.10-7.35 (m, 15 H), 7.60 (s, 1 H),
7.78 (s, 1 H); 13C NMR (CDCl3) δ 70.2, 72.7, 73.0, 74.0, 76.9,
81.7, 82.9, 89.2, 102.6, 110.4, 127.3, 127.8, 128.0, 128.1, 128.2,
1618 J. Org. Chem., Vol. 70, No. 5, 2005