6204-95-1Relevant academic research and scientific papers
L-2-Hydroxyglutarate production arises from noncanonical enzyme function at acidic pH
Intlekofer, Andrew M.,Wang, Bo,Liu, Hui,Shah, Hardik,Carmona-Fontaine, Carlos,Rustenburg, Ari?n S.,Salah, Salah,Gunner,Chodera, John D.,Cross, Justin R.,Thompson, Craig B.
, p. 494 - 500 (2017)
The metabolite 2-hydroxyglutarate (2HG) can be produced as either a D-R- or L-S- enantiomer, each of which inhibits α-ketoglutarate (αKG)-dependent enzymes involved in diverse biologic processes. Oncogenic mutations in isocitrate dehydrogenase (IDH) produce D-2HG, which causes a pathologic blockade in cell differentiation. On the other hand, oxygen limitation leads to accumulation of L-2HG, which can facilitate physiologic adaptation to hypoxic stress in both normal and malignant cells. Here we demonstrate that purified lactate dehydrogenase (LDH) and malate dehydrogenase (MDH) catalyze stereospecific production of L-2HG via 'promiscuous' reduction of the alternative substrate αKG. Acidic pH enhances production of L-2HG by promoting a protonated form of αKG that binds to a key residue in the substrate-binding pocket of LDHA. Acid-enhanced production of L-2HG leads to stabilization of hypoxia-inducible factor 1 alpha (HIF-1α) in normoxia. These findings offer insights into mechanisms whereby microenvironmental factors influence production of metabolites that alter cell fate and function.
Structure and Chemical Reaction Mechanism of LigU, an Enzyme That Catalyzes an Allylic Isomerization in the Bacterial Degradation of Lignin
Hogancamp, Tessily N.,Cory, Seth A.,Barondeau, David P.,Raushel, Frank M.
, p. 3494 - 3503 (2019/09/03)
LigU from Novosphingobium sp. strain KA1 catalyzes the isomerization of (4E)-oxalomesaconate (OMA) to (3Z)-2-keto-4-carboxy-3-hexenedioate (KCH) as part of the protocatechuate (PCA) 4,5-cleavage pathway during the degradation of lignin. The three-dimensional structure of the apo form of the wild-type enzyme was determined by X-ray crystallography, and the structure of the K66M mutant enzyme was determined in the presence of the substrate OMA. LigU is a homodimer requiring no cofactors or metal ions with a diaminopimelate epimerase structural fold, consisting of two domains with similar topologies. Each domain has a central α-helix surrounded by a β-barrel composed of antiparallel β-strands. The active site is at the cleft of the two domains. 1H nuclear magnetic resonance spectroscopy demonstrated that the enzyme catalyzes the exchange of the pro-S hydrogen at C5 of KCH with D2O during the isomerization reaction. Solvent-deuterium exchange experiments demonstrated that mutation of Lys-66 eliminated the isotope exchange at C5 and that mutation of C100 abolished exchange at C3. The positioning of these two residues in the active site of LigU is consistent with a reaction mechanism that is initiated by the abstraction of the pro-S hydrogen at C3 of OMA by the thiolate anion of Cys-100 and the donation of a proton at C5 of the proposed enolate anion intermediate by the side chain of Lys-66 to form the product KCH. The 1,3-proton transfer is suprafacial.
Identification of fumarate hydratase inhibitors with nutrient-dependent cytotoxicity
Takeuchi, Toshifumi,Schumacker, Paul T.,Kozmin, Sergey A.
supporting information, p. 564 - 567 (2015/01/30)
Development of cell-permeable small molecules that target enzymes involved in energy metabolism remains important yet challenging. We describe here the discovery of a new class of compounds with a nutrient-dependent cytotoxicity profile that arises from p
Direct Photoconversion of Pyruvate to Lactate in Aqueous TiO2 Dispersions
Cuendet, Pierre,Graetzel, Michael
, p. 654 - 657 (2007/10/02)
Pyruvate is efficiently converted to lactate under illumination of aqueous suspensions of titanium dioxide powder.This photoconversion does not require additional catalysts and its efficiency depends on the pH and the electron donor present in solution.Other keto carboxylic acids can also be photoreduced by the same process.The kinetics of reduction has been studied by monitoring the interfacial electron transfer occuring at the surface of colloidal TiO2 semiconducting particles using laser photolysis.
