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56-05-3 Usage

Chemical Properties

LIGHT BROWN CRYSTALLINE POWDER

Uses

Microwave-assisted synthesis of pyrazolo [3, 4-d] pyrimidines from 2-amino-4, 6-dichloropyrimidine-5-carbaldehyde is under solvent-free conditions. A series of 6-alkynyl-2,4-diaminopyrimidine derivatives bearing various substituents at alkynyl moiety was prepared by the Sonogashira cross-coupling reaction of 2,4-diamino-6-iodopyrimidine using Pd(PPh3)2Cl2 as catalyst.

Check Digit Verification of cas no

The CAS Registry Mumber 56-05-3 includes 5 digits separated into 3 groups by hyphens. The first part of the number,starting from the left, has 2 digits, 5 and 6 respectively; the second part has 2 digits, 0 and 5 respectively.
Calculate Digit Verification of CAS Registry Number 56-05:
(4*5)+(3*6)+(2*0)+(1*5)=43
43 % 10 = 3
So 56-05-3 is a valid CAS Registry Number.
InChI:InChI=1/C4H3Cl2N3/c5-2-1-3(6)9-4(7)8-2/h1H,(H2,7,8,9)

56-05-3 Well-known Company Product Price

  • Brand
  • (Code)Product description
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  • Detail
  • Alfa Aesar

  • (A11330)  2-Amino-4,6-dichloropyrimidine, 98%   

  • 56-05-3

  • 5g

  • 594.0CNY

  • Detail
  • Alfa Aesar

  • (A11330)  2-Amino-4,6-dichloropyrimidine, 98%   

  • 56-05-3

  • 25g

  • 1945.0CNY

  • Detail
  • Alfa Aesar

  • (A11330)  2-Amino-4,6-dichloropyrimidine, 98%   

  • 56-05-3

  • 100g

  • 6128.0CNY

  • Detail
  • Aldrich

  • (A48601)  2-Amino-4,6-dichloropyrimidine  98%

  • 56-05-3

  • A48601-10G

  • 742.95CNY

  • Detail
  • Aldrich

  • (A48601)  2-Amino-4,6-dichloropyrimidine  98%

  • 56-05-3

  • A48601-100G

  • 5,390.19CNY

  • Detail

56-05-3SDS

SAFETY DATA SHEETS

According to Globally Harmonized System of Classification and Labelling of Chemicals (GHS) - Sixth revised edition

Version: 1.0

Creation Date: Aug 12, 2017

Revision Date: Aug 12, 2017

1.Identification

1.1 GHS Product identifier

Product name 2-Amino-4,6-dichloropyrimidine

1.2 Other means of identification

Product number -
Other names 4,6-dichloropyrimidin-2-amine

1.3 Recommended use of the chemical and restrictions on use

Identified uses For industry use only.
Uses advised against no data available

1.4 Supplier's details

1.5 Emergency phone number

Emergency phone number -
Service hours Monday to Friday, 9am-5pm (Standard time zone: UTC/GMT +8 hours).

More Details:56-05-3 SDS

56-05-3Synthetic route

2-aminopyrimidine-4,6-diol
56-09-7

2-aminopyrimidine-4,6-diol

2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

Conditions
ConditionsYield
With triethylamine; trichlorophosphate at 40 - 90℃; for 2h;98.8%
With bis(trichloromethyl) carbonate In toluene at 70 - 75℃; for 6h; Reagent/catalyst; Temperature; Solvent;92%
With thionyl chloride for 4h; Reagent/catalyst; Temperature; Reflux;92.7%
2,4,6-trichloropyrimidine
3764-01-0

2,4,6-trichloropyrimidine

2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

Conditions
ConditionsYield
With sodium amide for 16h; Substitution; Heating;29%
2,4,6-trichloropyrimidine
3764-01-0

2,4,6-trichloropyrimidine

A

4-amino-2,6-dichloropyrimidine
10132-07-7

4-amino-2,6-dichloropyrimidine

B

2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

Conditions
ConditionsYield
With ethanol; ammonia
With ethanol; ammonia at 100℃;
With ethanol; ammonia at 20℃;
With sodium amide In dimethyl sulfoxide at 20℃; for 120h; Substitution;A 244 mg
B 55 mg
2-aminopyrimidine-4,6-diol
4425-67-6

2-aminopyrimidine-4,6-diol

A

2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

B

2-amino-4,5,6-trichloropyrimidine
51501-53-2

2-amino-4,5,6-trichloropyrimidine

Conditions
ConditionsYield
With phosphorus pentachloride; trichlorophosphate
N.N'-malonyl-guanidine

N.N'-malonyl-guanidine

2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

Conditions
ConditionsYield
With trichlorophosphate
2,4,6-trichloropyrimidine
3764-01-0

2,4,6-trichloropyrimidine

ammonia
7664-41-7

ammonia

A

4-amino-2,6-dichloropyrimidine
10132-07-7

4-amino-2,6-dichloropyrimidine

B

2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

Conditions
ConditionsYield
at 100℃;
2-amino-6-hydroxy-pyrimidin-4(3H)-one
56-09-7

2-amino-6-hydroxy-pyrimidin-4(3H)-one

2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

Conditions
ConditionsYield
With triethylamine; trichlorophosphate
2-amino-6-chloro-4-pyrimidinol
1194-21-4

2-amino-6-chloro-4-pyrimidinol

2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

Conditions
ConditionsYield
With tetraethylammonium chloride; N,N-dimethyl-aniline; trichlorophosphate In acetonitrile at 110℃; for 0.333333h;
2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

di-tert-butyl dicarbonate
24424-99-5

di-tert-butyl dicarbonate

tert-butyl N-tert-butoxycarbonyl-N-(4,6-dichloropyrimidin-2-yl)carbamate
847675-82-5

tert-butyl N-tert-butoxycarbonyl-N-(4,6-dichloropyrimidin-2-yl)carbamate

Conditions
ConditionsYield
With dmap In tetrahydrofuran at 20℃;100%
With dmap In tetrahydrofuran at 20℃; for 16h;97%
With dmap In dichloromethane at 20℃; for 30h;97%
2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

(4-methylcyclohex-1-en-1-yl)boronic acid
850567-92-9

(4-methylcyclohex-1-en-1-yl)boronic acid

4-chloro-6-(4-methylcyclohex-1-en-1-yl)pyrimidin-2-amine
1013111-70-0

4-chloro-6-(4-methylcyclohex-1-en-1-yl)pyrimidin-2-amine

Conditions
ConditionsYield
With sodium carbonate; tetrakis(triphenylphosphine) palladium(0) In tetrahydrofuran; water at 80℃; for 18h;100%
2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

5-(4-amino-2-fluorophenoxy)-1H-indazole
688781-69-3

5-(4-amino-2-fluorophenoxy)-1H-indazole

N-[2-amino-6-chloro-4-pyrimidinyl]-N-[3-fluoro-4-(1H-indazol-5-yloxy)phenyl]amine
688779-61-5

N-[2-amino-6-chloro-4-pyrimidinyl]-N-[3-fluoro-4-(1H-indazol-5-yloxy)phenyl]amine

Conditions
ConditionsYield
Stage #1: 2-Amino-4,6-dichloropyrimidine; 5-(4-amino-2-fluorophenoxy)-1H-indazole With hydrogenchloride In water at 100℃;
Stage #2: With sodium hydrogencarbonate In water pH=> 7;
100%
2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

tert-butylamine
75-64-9

tert-butylamine

2-amino-4-chloro-6-(1,1-dimethylethylamino)pyrimidine
30182-35-5

2-amino-4-chloro-6-(1,1-dimethylethylamino)pyrimidine

Conditions
ConditionsYield
In 1-methyl-pyrrolidin-2-one at 150℃; for 1h; Microwave irradiation;100%
With N-ethyl-N,N-diisopropylamine In butan-1-ol at 95℃;27%
With triethylamine In acetonitrile at 170℃; for 2.25h; microwave irradiation;
2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

N-(4,6-dichloro-pyrimidin-2-yl)-2,2,2-trifluoro-acetamide
774608-02-5

N-(4,6-dichloro-pyrimidin-2-yl)-2,2,2-trifluoro-acetamide

Conditions
ConditionsYield
With pyridine; trifluoroacetic anhydride In dichloromethane100%
2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

Cyclopentamine
1003-03-8

Cyclopentamine

6-chloro-4-N-cyclopentylpyrimidine-2,4-diamine
1030739-38-8

6-chloro-4-N-cyclopentylpyrimidine-2,4-diamine

Conditions
ConditionsYield
With N-ethyl-N,N-diisopropylamine In butan-1-ol at 95℃;100%
In methanol at 50℃; for 16h; Sealed tube; Inert atmosphere;93%
In methanol at 60℃; for 7.5h;
In ethanol at 50 - 100℃;
With N-ethyl-N,N-diisopropylamine In isopropyl alcohol at 100 - 160℃; Microwave irradiation;
2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

2-(2,2-dimethyl-1,3-dioxan-5-yl)ethyl-1-amine

2-(2,2-dimethyl-1,3-dioxan-5-yl)ethyl-1-amine

6-chloro-N4-(2-(2,2-dimethyl-1,3-dioxan-5-yl)ethyl)pyrimidine-2,4-diamine

6-chloro-N4-(2-(2,2-dimethyl-1,3-dioxan-5-yl)ethyl)pyrimidine-2,4-diamine

Conditions
ConditionsYield
With potassium carbonate In N,N-dimethyl-formamide at 80℃; for 18h; Reagent/catalyst; Temperature;100%
2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

1-amino-2-propene
107-11-9

1-amino-2-propene

6-chloro-4-N-(prop-2-en-1-yl)pyrimidine-2,4-diamine
6266-70-2

6-chloro-4-N-(prop-2-en-1-yl)pyrimidine-2,4-diamine

Conditions
ConditionsYield
With triethylamine for 21h; Ambient temperature;99%
With triethylamine In neat (no solvent) Heating;85%
With N-ethyl-N,N-diisopropylamine In butan-1-ol at 95℃;84%
2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

2-amino-4-hydroxy-6-iodopyrimidine
59524-88-8

2-amino-4-hydroxy-6-iodopyrimidine

Conditions
ConditionsYield
With hydrogen iodide; sodium iodide In acetone at 100℃; for 0.0833333h; microwave irradiation;99%
With hydrogen iodide; sodium iodide In acetone at 20℃; for 48h;86%
2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

isopropylamine
75-31-0

isopropylamine

6-chloro-N4-isopropylpyrimidine-2,4-diamine
30182-24-2

6-chloro-N4-isopropylpyrimidine-2,4-diamine

Conditions
ConditionsYield
With N-ethyl-N,N-diisopropylamine In butan-1-ol at 95℃;99%
In methanol at 50℃; Sealed tube; Inert atmosphere;71%
In sulfuric acid
2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

2,2-dimethylpropylamine
5813-64-9

2,2-dimethylpropylamine

6-chloro-4-N-(2,2-dimethylpropyl)pyrimidine-2,4-diamine

6-chloro-4-N-(2,2-dimethylpropyl)pyrimidine-2,4-diamine

Conditions
ConditionsYield
With triethylamine In butan-1-ol at 110℃; for 12h; Inert atmosphere;99%
With N-ethyl-N,N-diisopropylamine In butan-1-ol at 95℃;
2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

cyclohexylamine
108-91-8

cyclohexylamine

6-chloro-N4-cyclohexylpyrimidine-2,4-diamine
30182-26-4

6-chloro-N4-cyclohexylpyrimidine-2,4-diamine

Conditions
ConditionsYield
In methanol at 50℃; for 48h; Inert atmosphere; Sealed tube;99%
In methanol at 70℃; for 1h;
With N-ethyl-N,N-diisopropylamine In butan-1-ol at 95℃;
With triethylamine In ethanol at 80 - 90℃; for 0.666667h; Microwave irradiation;
2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

2-(N,N-dimethylamino)ethanol
108-01-0

2-(N,N-dimethylamino)ethanol

4-chloro-6-(2-(dimethylamino)ethoxy)pyrimidin-2-amine
1521045-77-1

4-chloro-6-(2-(dimethylamino)ethoxy)pyrimidin-2-amine

Conditions
ConditionsYield
With sodium hydride for 0.166667h; Microwave irradiation;99%
2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

2-(Diethylamino)ethanol
100-37-8

2-(Diethylamino)ethanol

4-chloro-6-(2-(diethylamino)ethoxy)pyrimidin-2-amine
1507138-87-5

4-chloro-6-(2-(diethylamino)ethoxy)pyrimidin-2-amine

Conditions
ConditionsYield
With sodium hydride for 0.166667h; Microwave irradiation;99%
2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

(1R)-1-cyclopropylethan-1-amine
6240-96-6

(1R)-1-cyclopropylethan-1-amine

6-chloro-4-N-[(1R)-1-cyclopropylethyl]pyrimidine-2,4-diamine

6-chloro-4-N-[(1R)-1-cyclopropylethyl]pyrimidine-2,4-diamine

Conditions
ConditionsYield
With N-ethyl-N,N-diisopropylamine In butan-1-ol at 95℃;99%
2-(4-fluorophenyl)pyrrolidine
72216-06-9

2-(4-fluorophenyl)pyrrolidine

2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

C14H14ClFN4

C14H14ClFN4

Conditions
ConditionsYield
With N-ethyl-N,N-diisopropylamine In dimethyl sulfoxide at 85℃;99%
2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

propan-1-ol-3-amine
156-87-6

propan-1-ol-3-amine

2-Amino-6-chloro-4-[(3-hydroxypropyl)amino]pyrimidine

2-Amino-6-chloro-4-[(3-hydroxypropyl)amino]pyrimidine

Conditions
ConditionsYield
With triethylamine In ethanol; ethyl acetate98.7%
2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

((1R,5R)-5-Amino-cyclohex-3-enyl)-methanol

((1R,5R)-5-Amino-cyclohex-3-enyl)-methanol

[(1S,5S)-5-(2-Amino-6-chloro-pyrimidin-4-ylamino)-cyclohex-3-enyl]-methanol

[(1S,5S)-5-(2-Amino-6-chloro-pyrimidin-4-ylamino)-cyclohex-3-enyl]-methanol

Conditions
ConditionsYield
With triethylamine In butan-1-ol for 46h; Heating;98%
2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

benzyl alcohol
100-51-6

benzyl alcohol

2-amino-4-(benzyloxy)-6-chloropyrimidine
210992-85-1

2-amino-4-(benzyloxy)-6-chloropyrimidine

Conditions
ConditionsYield
Stage #1: benzyl alcohol With sodium hydride In tetrahydrofuran
Stage #2: 2-Amino-4,6-dichloropyrimidine In tetrahydrofuran; N,N-dimethyl-formamide
98%
Stage #1: benzyl alcohol With sodium hydride In dimethyl sulfoxide at 20℃; for 0.5h;
Stage #2: 2-Amino-4,6-dichloropyrimidine In dimethyl sulfoxide at 80℃; for 5h; Inert atmosphere;
75%
Stage #1: benzyl alcohol With sodium hydride In tetrahydrofuran at 0 - 20℃; for 0.5h;
Stage #2: 2-Amino-4,6-dichloropyrimidine In tetrahydrofuran; N,N-dimethyl-formamide at 100℃; for 1h;
Stage #1: benzyl alcohol With sodium hydride In tetrahydrofuran at 0 - 25℃; for 0.5h;
Stage #2: 2-Amino-4,6-dichloropyrimidine In tetrahydrofuran; N,N-dimethyl-formamide at 100℃; for 1h; Sealed vial;
2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

2-amino-4,6-disulfanylpyrimidine
626-49-3

2-amino-4,6-disulfanylpyrimidine

Conditions
ConditionsYield
Stage #1: 2-Amino-4,6-dichloropyrimidine With thiourea In ethanol for 2h; Reflux;
Stage #2: With water; sodium hydroxide at 80℃; for 16h;
98%
2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

3-Dimethylamino-1-propanol
3179-63-3

3-Dimethylamino-1-propanol

4-chloro-6-(3-(dimethylamino)propoxy)pyrimidin-2-amine
1544806-80-5

4-chloro-6-(3-(dimethylamino)propoxy)pyrimidin-2-amine

Conditions
ConditionsYield
With sodium hydride for 0.166667h; Microwave irradiation;98%
methanol
67-56-1

methanol

2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

sodium methylate
124-41-4

sodium methylate

2-amino-4-chloro-6-methoxypyrimidine
5734-64-5

2-amino-4-chloro-6-methoxypyrimidine

Conditions
ConditionsYield
at 17℃; for 4.5h; Product distribution / selectivity; Heating / reflux;97%
for 20h; Heating / reflux;90%
2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

ethanol
64-17-5

ethanol

2-Amino-4,6-diethoxy-pyrimidin
90154-00-0

2-Amino-4,6-diethoxy-pyrimidin

Conditions
ConditionsYield
With sodium at 70℃; for 23.5h;97%
Stage #1: ethanol With sodium hydride In tetrahydrofuran for 0.25h; Inert atmosphere;
Stage #2: 2-Amino-4,6-dichloropyrimidine In tetrahydrofuran for 15h; Inert atmosphere;
94%
With sodium hydride for 12h; Reflux; Inert atmosphere;89%
With sodium hydride In mineral oil at 20℃; for 12h; Reflux; Inert atmosphere;89%
2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

6-chloroisocytosine
1194-21-4

6-chloroisocytosine

Conditions
ConditionsYield
With sodium hydroxide for 1h; Heating;96%
With sodium hydroxide In water for 2h; Reflux;95%
With sodium hydroxide In water for 5h; Reflux;86%
2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

4-Aminobenzonitrile
873-74-5

4-Aminobenzonitrile

4-[(2-amino-6-chloropyrimidin-4-yl)amino]benzonitrile
91183-10-7

4-[(2-amino-6-chloropyrimidin-4-yl)amino]benzonitrile

Conditions
ConditionsYield
With hydrogenchloride In water at 100℃;96%
2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

2,2,2-trifluoroethanol
75-89-8

2,2,2-trifluoroethanol

4,6-bis(2,2,2-trifluoroethoxy)pyrimidine-2-amine
298219-62-2

4,6-bis(2,2,2-trifluoroethoxy)pyrimidine-2-amine

Conditions
ConditionsYield
Stage #1: 2,2,2-trifluoroethanol With sodium hydride In tetrahydrofuran at 0℃; for 0.0166667h;
Stage #2: 2-Amino-4,6-dichloropyrimidine In tetrahydrofuran at 62℃; for 15h;
96%
Stage #1: 2,2,2-trifluoroethanol With sodium hydride In tetrahydrofuran for 0.25h; Inert atmosphere;
Stage #2: 2-Amino-4,6-dichloropyrimidine In tetrahydrofuran for 15h; Inert atmosphere;
94%
With sodium hydride In tetrahydrofuran at 0 - 62℃; for 15h; Inert atmosphere;94%
2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

N-benzylhydrazine hydrochloride
1073-62-7, 20570-96-1

N-benzylhydrazine hydrochloride

C17H16ClN5

C17H16ClN5

Conditions
ConditionsYield
With N-ethyl-N,N-diisopropylamine In tetrahydrofuran at 60℃; for 3h;96%
2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

sodium methylate
124-41-4

sodium methylate

2-amino-4-chloro-6-methoxypyrimidine
5734-64-5

2-amino-4-chloro-6-methoxypyrimidine

Conditions
ConditionsYield
In acetone at 17 - 30℃; for 6.5h; Product distribution / selectivity;95.3%
In acetic acid methyl ester at 17 - 30℃; for 6.5h; Product distribution / selectivity;94.6%
In methanol for 20h; Heating / reflux;90%
2-Amino-4,6-dichloropyrimidine
56-05-3

2-Amino-4,6-dichloropyrimidine

cyclopropylmethanaminum benzoate

cyclopropylmethanaminum benzoate

6-chloro-N4-(cyclopropylmethyl)pyrimidine-2,4-diamine

6-chloro-N4-(cyclopropylmethyl)pyrimidine-2,4-diamine

Conditions
ConditionsYield
With sodium carbonate In Isopropyl acetate; water at 78 - 80℃; for 12.5h; Reagent/catalyst; Temperature; Solvent; Time; Inert atmosphere; Sealed tube; Industrial scale;95.2%

56-05-3Relevant articles and documents

A modular approach towards functionalized highly stable self-complementary quadruple hydrogen bonded systems

Rayavarapu, Suresh,Kheria, Sanjeev,Shinde, Dinesh R.,Gonnade, Rajesh G.,Sanjayan, Gangadhar J.

, p. 10087 - 10094 (2017)

Self-complementary quadruple hydrogen bonded systems have shown potential as key building blocks for developing various supramolecular polymers. Opportunities for the introduction of multiple functionalities would further augment, in principle, their application potential. Herein, we report a novel modular approach to simultaneously introduce two closely aligned side chains into AADD-type self-complementary quadruple hydrogen-bonding systems. Dithiane-tethered ureidopyrimidinone has been used as a reactive intermediate to efficiently attach closely aligned side chains by simply reacting with amines to form highly stable molecular duplexes. These duplexes featuring AADD-type arrays of hydrogen bonding codes are highly stable in non-polar solvents (Kdim > 1.9 × 107 M-1 in CDCl3) as well as in polar solvents (Kdim > 105 in 10% DMSO-d6/CDCl3). Another notable feature of these self-assembling systems is their insensitivity to prototropy-related issues owing to their prototropic degeneracy, which will enhance their application potential in supramolecular chemistry.

Cinnamide derived pyrimidine-benzimidazole hybrids as tubulin inhibitors: Synthesis, in silico and cell growth inhibition studies

Sana, Sravani,Reddy, Velma Ganga,Srinivasa Reddy,Tokala, Ramya,Kumar, Rahul,Bhargava, Suresh K.,Shankaraiah, Nagula

, (2021/03/15)

An approach in modern medicinal chemistry to discover novel bioactive compounds is by mimicking diverse complementary pharmacophores. In extension of this strategy, a new class of piperazine-linked cinnamide derivatives of benzimidazole-pyrimidine hybrids have been designed and synthesized. Their in vitro cytotoxicity profiles were explored on selected human cancer cell lines. Specifically, structural comparison of target hybrids with tubulin-DAMA-colchicine and tubulin-nocodazole complexes has exposed a deep position of benzimidazole ring into the αT5 loop. All the synthesized compounds were demonstrated modest to interesting cytotoxicity against different cancer cell lines. The utmost cytotoxicity has shown with an amine linker of benzimidazole-pyrimidine series, with specificity toward A549 (lung cancer) cell line. The most potent compound in this series was 18i, which inhibited cancer cell growth at micromolar concentrations ranging 2.21–7.29 μM. Flow cytometry studies disclosed that 18i inhibited the cells in G2/M phase of cell cycle. The potent antitumor activity of 18i resulted from enhanced microtubule disruption at a similar level as nocodazole on β-tubulin antibody, explored using immunofluorescence staining. The most active compound 18i also inhibited tubulin polymerization with an IC50 of 5.72 ± 0.51 μM. In vitro biological analysis of 18i presented apoptosis induction on A549 cells with triggering of ROS generation and loss of mitochondrial membrane potential, resulting in DNA injury. In addition, 18i displayed impairment in cellular migration and inhibited the colony formation. Notably, the safety profile of most potent compound 18i was revealed by screening against normal human pulmonary epithelial cells (L132: IC50: 69.25 ± 5.95 μM). The detailed binding interactions of 18i with tubulin was investigated by employing molecular docking, superimposition and free energy analyses. Thus remarks made in this study established that pyrimidine-benzimidazole hybrids as a new class of tubulin polymerization inhibitors with significant anticancer activity.

Exploration of carbamide derived pyrimidine-thioindole conjugates as potential VEGFR-2 inhibitors with anti-angiogenesis effect

Bhandari, Sonal,Bhargava, Suresh K.,Reddy, T. Srinivasa,Reddy, Velma Ganga,Sakla, Akash P.,Sana, Sravani,Shankaraiah, Nagula,Tokala, Ramya

, (2020/05/18)

The development of new small molecules from known structural motifs through molecular hybridization is one of the trends in drug discovery. In this connection, we have combined the two pharmacophoric units (pyrimidine and thioindole) in a single entity via molecular hybridization strategy along with introduction of urea functionality at C2 position of pyrimidine to increase the efficiency of H-bonding interactions. Among the synthesized conjugates 12a-aa, compound 12k was found to exhibit significant IC50 values 5.85, 7.87, 6.41 and 10.43 μM against MDA-MB-231 (breast), HepG2 (liver), A549 (lung) and PC-3 (prostate) cancer cell lines, respectively. All these compounds were further evaluated for their inhibitory activities against VEGFR-2 protein. The results specified that among the tested compounds, 12d, 12e, 12k, 12l, 12p, 12q, 12t and 12u prominently suppressed VEGFR-2, with IC50 values of 310–920 nM in association to the positive control (210 nM). Angiogenesis inhibition was evident by tube formation assay in HUVECs and cell-invasion by transwell assay. The mechanism of cellular toxicity on MDA-MB-231 was found through depolarisation of mitochondrial membrane potential, increased ROS production and subsequent DNA damage resulting in apoptosis induction. Moreover, clonogenic and wound healing assays designated the inhibition of colony formation and cell migration by 12k in a dose-dependent manner. Molecular docking studies also shown that compound 12k capably intermingled with catalytically active residues GLU-885, ASP-1046 of the VEGFR-2 through hydrogen-bonding interactions.

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