24040-37-7Relevant articles and documents
Alkylphosphinites as Synthons for Stabilized Carbocations
Ochmann, Lukas,Kessler, Mika L.,Schreiner, Peter R.
supporting information, p. 1460 - 1464 (2022/03/01)
We present a new acid-free method for the generation of carbocations based on a redox condensation reaction that enables SN1 reactions with a variety of nucleophiles. We utilize readily synthesized phosphinites that are activated by diisopropyl azodicarboxylate to form betaine structures that collapse upon adding a pronucleophile, thereby yielding reactive carbocation intermediates. We also employ this approach for the alkylation of some bioactive molecules.
Optimal Destabilization of DNA Double Strands by Single-Nucleobase Caging
Seyfried, Patrick,Heinz, Marcel,Pintér, Gy?rgy,Kl?tzner, Dean-Paulos,Becker, Yvonne,Bolte, Michael,Jonker, Hendrik R. A.,Stelzl, Lukas S.,Hummer, Gerhard,Schwalbe, Harald,Heckel, Alexander
supporting information, p. 17568 - 17576 (2018/11/10)
Photolabile protecting groups are widely used to trigger oligonucleotide activity. The ON/OFF-amplitude is a critical parameter. An experimental setup has been developed to identify protecting group derivatives with superior caging properties. Bulky rests
Recyclable zinc (II) ionic liquid catalyzed synthesis of azides by direct azidation of alcohols using trimethylsilylazide at room temperature
Singh, Ashima,Singh, Harjinder,Khurana
supporting information, p. 2498 - 2502 (2017/05/31)
A new efficient method has been reported for the synthesis of azides by direct azidation of alcohols with TMSN3 in presence of recyclable task specific ionic liquid (TSIL) [bmim]ZnCl3 as a catalyst in DCM at room temperature. Ionic liquid [bmim]ZnCl3 was synthesized under solvent free conditions and characterized by IR, 1H NMR, 13C NMR and HRMS. The Lewis acidity of catalyst was also examined using IR spectroscopy. The main features of this new methodology are high yields of products, recyclability of catalyst, scalability of reaction to gram scale and short reaction time.
PROTEIN DERIVATIZATION TO ENDOW CELL PENETRATION
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Paragraph 0095-0097, (2016/04/20)
Methods and reagents for enhancing cellular uptake of a cargo molecule by covalently bonding optionally-substituted fluorenyl groups to the cargo molecules, where cellular uptake includes at least partial uptake into the cytosol. Useful fluorenylation reagents include those of formula: and salts thereof where variables are as defined. Cargo molecules include peptides and proteins. Also provided are fluorenylated cargo molecules, including fluorenylated peptides and proteins.
Fluorogenic Strain-Promoted Alkyne-Diazo Cycloadditions
Friscourt, Frédéric,Fahrni, Christoph J.,Boons, Geert-Jan
supporting information, p. 13996 - 14001 (2015/09/28)
Fluorogenic reactions, in which non- or weakly fluorescent reagents produce highly fluorescent products, are attractive for detecting a broad range of compounds in the fields of bioconjugation and material sciences. Herein, we report that a dibenzocyclooctyne derivative modified with a cyclopropenone moiety (Fl-DIBO) can undergo fast strain-promoted cycloaddition reactions under catalyst-free conditions with azides, nitrones, nitrile oxides, as well as mono- and disubstituted diazo-derivatives. Although the reaction with nitrile oxides, nitrones, and disubstituted diazo compounds gave cycloadducts with low quantum yield, monosubstituted diazo reagents produced 1H-pyrazole derivatives that exhibited an approximately 160-fold fluorescence enhancement over Fl-DIBO combined with a greater than 10 000-fold increase in brightness. Concluding from quantum chemical calculations, fluorescence quenching of 3H-pyrazoles, which are formed by reaction with disubstituted diazo-derivatives, is likely due to the presence of energetically low-lying (n,π?) states. The fluorogenic probe Fl-DIBO was successfully employed for the labeling of diazo-tagged proteins without detectable background signal. Diazo-derivatives are emerging as attractive reporters for the labeling of biomolecules, and the studies presented herein demonstrate that Fl-DIBO can be employed for visualizing such biomolecules without the need for probe washout.
PREPARATION OF DIAZO AND DIAZONIUM COMPOUNDS
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Page/Page column 29, (2010/06/13)
A method for making diazo-compounds, diazonium salts thereof and other protected forms of these compounds. Diaz-compounds are prepared by reaction of a tertiary phosphine reagent carrying a reactive carbonyl group with an azide. The reaction can also generate an acyl triazene which can be converted thermally or by addition of base to form the diazo-compound or the acyl triazene can be isolated. The method is particularly useful for conversion of azides carrying one or more electron withdrawing groups to diazo-compounds. The method can be carried out in aqueous medium under mild conditions and is particularly useful for conversion of azido sugars to diazo-compound and diazonium salts thereof under physiological conditions. Tertiary phosphine reagents, particularly those that are water-soluble, and precursors for preparation of the reagents are provided.
Experiments and calculations for determination of the stabilities of benzyl, benzhydryl, and fluorenyl carbocations: Antiaromaticity revisited
Amyes, Tina L.,Richard, John P.,Novak, Michael
, p. 8032 - 8041 (2007/10/02)
The following pKR values for the formation of benzyl, benzhydryl, and fluorenyl carbocations in 50:50 (v:v) trifluoroethanol/water at I = 0.50 (NaClO4) were determined as pKR = -log (kHOH[H2O]/kH), where kH is the second-order rate constant for acid-catalyzed reaction of the alcohol to form the carbocation and kHOH is the second-order rate constant for capture of the carbocation by water: (R+, pKR); PhCH2+, ≤-20; PhCH(Me)+, -15.4; PhC(Me)2+, -12.3; Ph2CH+, -11.7; Ph2C(Me)+, -9.3; 9-fluorenyl carbocation (9-Fl+), -15.9; 9-methyl-9-fluorenyl carbocation (9-Me-9-Fl+), -11.1. The pKR for Ph2CH+ is in fair agreement with the value estimated using acidity functions,1a but the pKR for 9-Me-9-Fl+ is ca. 4 units more positive than that from the acidity function method,1a so that the difference in the acidity of benzhydryl and fluorenyl carbocations is smaller than estimated in earlier work. The 12 π-electron cyclic fluorenyl system in 9-Fl+ and 9-Me-9-Fl+ causes only 5.7 kcal/mol and 2.4 kcal/mol, respectively, destabilization of the corresponding acyclic carbocations Ph2CH+ and Ph2C(Me)+. The pKR values show that "antiaromatic" destabilization of the 9-fluorenyl carbocations must be small. Ab initio calculations of the structures and energies of 9-Fl+ and Ph2CH+ and of the corresponding alcohols at the 3-21G//3-21G and 6-31G*//3-21G levels indicate that Ph2CH+ is ca. 8-10 kcal/mol more stable than 9-F1+, which is in good agreement with the stability difference calculated from the pKR data. This indicates that electronic factors play the major role in determining the relative energies of these carbocations. Force field calculations were performed to estimate the contribution of van der Waals and ring strains to the difference in the pKR values for Ph2CH+ and 9-Fl+. Assuming hypothetical structures for Ph2CH+ and 9-Fl+ which are free of van der Waals and ring strains, it is then estimated that there is an 8-11 kcal/mol decrease in π-electron stabilization on moving from Ph2CH+ (C2v) and 9-F1OH to 9-Fl+ and Ph2CHOH. It is concluded that 9-fluorenyl carbocations are not antiaromatic. The difference in the energy of the 9-fluorenyl and benzhydryl carbanions relative to the alcohols was calculated to be -13.2 kcal/mol at the 6-31G*//3-21G level. This difference is attributed to the difference in the energies of the HOMOs for the two carbanions.
