G.E. Magoulas et al. / Tetrahedron 68 (2012) 7041e7049
7047
C), 79.6, 69.7, 62.0 (two C), 46.8, 45.7, 44.4, 37.4, 37.0, 29.7, 28.5
(nine C), 27.6, 24.6, 24.2, 23.8, 14.0.
(twelve C), 127.1 (twelve C), 127.0, 126.9, 126.4, 125.6 (twelve C),
69.4 (two C), 66.6 (two C), 63.0 (four C), 46.8 (two C), 45.5 (two C),
36.9 (two C), 25.7 (two C), 22.4 (two C), 16.6 (two C).
Compound 37. Yield: 0.019 g (15%), brown solid; Rf (CHCl3/
MeOH/concd NH3 9:1:0.1): 0.23; HRMS (m/z): [MþH]þ calcd for
C115H64N5O, 1530.5111; found, 1530.5197.
Compound 33. Reaction time: 30 min; yield: 0.048 g (91%),
brown solid; Rf (CHCl3/MeOH 95:5): 0.19; IR (KBr, cmꢂ1): 3396,
1662,1618, 748, 704; HRMS-ESI (m/z): [MþH]þ calcd for C93H43N4O,
1231.3437; found, 1231.3821; 1H NMR (CDCl3, ): 1H NMR (CDCl3,
d
d): 7.45e7.41, 7.32e7.25 and 7.23e7.17 (15H, three m), 6.48 (1H,
unresolved t), 6.23 (1H, s), 4.41 (4H, s), 3.70 (2H, s), 3.39e3.34 (4H,
m), 2.87 (2H, t, J¼6.4 Hz), 2.79 (2H, t, J¼6.0 Hz), 2.50 (3H, s), 2.49
(1H, s), 2.34 (2H, quintet, J¼6.0 Hz), 1.76e1.66 (4H, m); 13C NMR
5.6. General procedure for the deprotection of compounds 31,
33, 35 and 36
(CDCl3,
d
): 162.6, 154.8, 147.2, 146.2 (three C), 146.1, 145.6, 145.4,
To an ice-cold suspension of compound 31 (0.04 g, 0.03 mmol)
or 33 (0.04 g, 0.032 mmol) or 35 (0.03 g, 0.02 mmol) or 36 (0.03 g,
145.3, 144.5, 143.0, 142.6, 142.2, 142.1, 141.9, 140.1, 136.2, 128.6 (six
C), 128.1 (six C), 128.0, 127.4, 126.6 (three C), 70.4, 67.3, 63.3 (two C),
50.3, 48.0, 44.0, 42.0, 32.6, 29.5, 27.5, 17.4.
0.015 mmol) in CH2Cl2 (0.1 mL) TFA (0.1 mL or 40
compound 33) was added and the resulting solution was stirred at
ꢀC for 2 h. The reaction mixture was evaporated to dryness and
mL in the case of
0
5.4. Procedure for the synthesis of compound 35
triturated with Et2O to afford the corresponding trifluoroacetate
salts 2, 3, 5 and 6 as brown solids.
To a suspension of acid 28 (0.04 g, 0.041 mmol), SPD derivative
Compound 2. Yield: 0.039 g (94%); IR (KBr, cmꢂ1): 3396,
3030e2700, 1684, 1654, 1202, 1132; HRMS (m/z): [MþH]þ calcd for
34 (0.05 g, 0.08 mmol) and PyBrOP (0.028 g, 0.06 mmol) in DMF
i
(0.15 mL) was added Pr2NEt (35
mL, 0.2 mmol). The reaction mix-
C77H36N5O, 1046.2920, found 1046.2974; 1H NMR (DMSO-d6,
d):
ture was left to stir at ambient temperature for 1 h and then was
diluted with CHCl3, and washed once with a 5% aq solution NaHCO3
and twice with water. The organic layer was dried over Na2SO4 and
evaporated to dryness. The anticipated product was obtained pure
after FCC purification. Yield: 0.035 g (58%), brown solid; Rf (PhMe/
EtOAc 9:1): 0.25; IR (KBr, cmꢂ1): 3288, 1642, 1619, 770, 748, 706;
HRMS-ESI (m/z): [MþH]þ calcd for C112H57N4O, 1473.4532; found,
8.71 (2H, br s), 8.56 (2H, br s), 8.27 (1H, t, J¼6.0 Hz), 7.88 (3H, br s),
6.22 (1H, s), 4.48 (4H, s), 3.76 (2H, s), 3.23 (2H, q, J¼6.0 Hz),
3.05e2.85 (10H, m), 2.39 (3H, s), 1.86 (2H, quintet, J¼8.0 Hz), 1.78
(2H, quintet, J¼8.0 Hz), 1.68e1.60 (4H, unresolved m); 13C NMR
(DMSO-d6, d): 168.3, 155.8, 147.2, 146.6, 146.2, 146.0, 145.8, 145.3,
145.2, 144.5, 143.2, 143.1, 142.6, 142.3, 142.0, 141.9, 141.8, 139.8,
136.2, 71.3 (two C), 67.3, 46.7, 44.4, 36.7, 31.1, 27.1, 24.3, 23.2, 23.1,
17.4. The two missing PA backbone C atoms are buried under the
solvent.
1473.4105; 1H NMR (CDCl3,
d): 7.45e7.30, 7.21e7.17 and 7.16e7.05
(30H, three m), 6.47 (1H, 2 s), 4.31 (4H, 2 s), 3.60 (2H, 2 s), 3.42 and
3.38 (2H, two t, J¼6.4 Hz), 3.25 and 3.21 (2H, two t, J¼6.4 Hz), 2.28
(3H, s), 2.17e2.08 (4H, m), 1.80e1.68 (2H, m), 1.56e1.37 (4H, m); 13C
Compound 3. Yield: 0.037 g (95%); IR (KBr, cmꢂ1): 3398,
3030e2700, 1678, 1654, 1198, 1135; HRMS (m/z): [MþH]þ calcd for
NMR (CDCl3,
d
): 167.7, 154.8, 147.3, 146.3 (six C), 146.1, 146.0, 145.8,
C74H29N4O, 989.2341, found 989.2381; 1H NMR (DMSO-d6,
d): 8.47
145.7,145.6,145.5, 145.3, 144.6,143.1, 142.7, 142.2, 142.1, 141.9,140.2,
137.9, 136.2, 129.0 (twelve C), 128.6, 128.5, 128.2 (twelve C), 127.8,
125.3 (six C), 70.7 (two C), 67.7, 61.3 (two C), 47.0, 45.6, 30.8, 29.7,
28.3, 27.2, 25.9, 17.8.
(2H, br s), 8.13 (1H, t, J¼6.0 Hz), 7.80 (3H, br s), 6.20 (1H, s), 4.47 (4H,
s), 3.74 (2H, s), 3.17 (2H, q, J¼6.0 Hz), 3.01e2.84 (6H, m), 2.39 (3H, s),
1.86 (2H, quintet, J¼6.4 Hz), 1.61 (2H, quintet, J¼6.4 Hz), 1.52 (2H,
quintet, J¼6.4 Hz); 13C NMR (DMSO-d6,
d): 167.9, 155.8, 147.2, 146.6,
146.2, 146.0, 145.8, 145.3, 145.2, 143.0, 142.6, 142.3, 142.0, 141.9,
140.0, 136.2, 71.3 (two C), 67.3, 47.1, 44.4, 38.1, 36.7, 26.9, 24.2, 23.6,
17.3.
5.5. General procedure for the synthesis of compounds 7 and
36
Compound 5. Yield: 0.023 g (95%); IR (KBr, cmꢂ1): 3394,
3030e2800, 1652, 1630, 1200, 1137; HRMS (m/z): [MþH]þ calcd for
To a solution of PA 19 (0.045 g, 0.084 mmol) or 18 (0.058 g,
0.084 mmol) and Et3N (29
mL, 0.21 mmol) in DMF (0.1 mL), active
C74H29N4O, 989.2341, found 989.2346; 1H NMR (DMSO-d6,
d): 7.82
ester 29 (0.040 g, 0.042 mmol) was added. The resulting mixture
was left to stir at ambient temperature until the completion of the
reaction (monitored by TLC). Then, it was diluted with CHCl3,
washed once with a 5% aq solution NaHCO3 and twice with water.
The organic layer was dried over Na2SO4 and evaporated to dryness
to afford pure 7 and 38 and 36 and 37, respectively, after FCC
purification.
(6H, br s), 6.59 and 6.54 (1H, two s), 4.48 (4H, s), 3.79 (2H, s),
2.85e2.79 (6H, unresolved m), 2.18 and 2.17 (3H, two s), 1.80 (2H,
m), 1.62e1.46 (6H, m); 13C NMR (DMSO-d6,
d): 168.0 and 167.2 (1C),
155.8, 147.2, 147.0, 146.6, 146.2, 146.0, 145.8, 145.3, 145.2, 144.5,
143.3, 143.1, 142.6, 142.3, 142.0, 141.9, 140.0, 136.2, 71.1 (two C), 67.1,
47.9, 44.1, 37.3, 35.7, 26.1, 24.8, 23.4, 17.7.
Compound 6. Yield: 0.029 g (92%); IR (KBr, cmꢂ1): 3248,
3030e2700, 1654, 1560, 1168; HRMS (m/z): [MþH]þ calcd for
Compound 7. Reaction time: 2 h; yield: 0.029 g (34%), brown
solid; Rf (CHCl3/MeOH/concd NH3 95:5:0.5): 0.48; IR (KBr, cmꢂ1):
3460, 1684, 1654; ESI-MS (m/z): 1984.32 (MþNHþ4 ), 1966.51 (M);
HRMS (m/z): [MþH]þ calcd for C144H39N12O2, 1967.3319; found,
1889.3678 [(MþHþ)ꢂ6Nþ6H].
C144H45N6O2, 1889.3604, found 1889.3552; 1H NMR (DMSO-d6,
d):
8.80 (4H, br s), 8.25 (2H, t, J¼6.0 Hz), 6.22 (2H, s), 4.50 (8H, s),
3.76 (4H, s), 3.27 (4H, q, J¼6.0 Hz), 2.96e2.84 (8H, unresolved m),
2.39 (6H, s), 1.86 (4H, quintet, J¼6.0 Hz), 1.69e1.61 (4H, un-
Compound 38. Yield: 0.019 g (20%), brown solid; Rf (CHCl3/
MeOH/concd NH3 95:5:0.5): 0.27; HRMS (m/z): [MþH]þ calcd for
C77H30N11O, 1124.2635; found, 1124.2645.
resolved m); 13C NMR (DMSO-d6,
d): 169.5 (two C), 157.0 (two C),
148.4, 147.8, 147.4, 147.2, 146.9, 146.5, 146.4, 144.4, 144.3, 143.8,
143.5, 143.2, 143.1, 143.0, 141.2, 137.4, 72.5 (four C), 68.5 (two C),
46.7 (two C), 45.1 (two C), 36.9 (two C), 25.5 (two C), 23.0 (two C),
18.6 (two C).
Compound 36. Reaction time: 3 h; yield: 0.035 g (35%), brown
solid; Rf (CHCl3/MeOH 99:1): 0.25; IR (KBr, cmꢂ1): 3420, 1626, 742,
706; HRMS (m/z): [MþH]þ calcd for C182H73N6O2, 2373.5795;
found, 2373.5423; 1H NMR (CDCl3,
d): 8.14 (2H, s), 7.51e7.49,
5.7. General procedure for the synthesis of compounds 8 and
9
7.30e7.27 and 7.19e7.08 (30H, three m), 6.42 (2H, s), 4.52 (8H, s),
3.89 (4H, s), 3.62 (4H, t, J¼7.2 Hz), 3.16e3.02 (8H, m), 2.60 (6H, s),
1.74 (4H, quintet, J¼7.2 Hz), 1.49e1.42 (4H, m); 13C NMR (CDCl3,
d
):
To a suspension of SPM derivative 2 (0.04 g, 0.025 mmol) in
CH2Cl2/DMF (1:1, 0.1 mL) were added successively active ester 12
161.6 (two C), 153.8 (two C), 146.2, 145.2, 145.1, 144.6, 144.4, 144.3,
144.1, 143.5, 143.1, 142.0, 141.6, 141.2, 141.1, 140.9, 139.1, 135.2, 127.6
i
(0.009 g, 0.021 mmol) or 13 (0.008 g, 0.021 mmol) and Pr2NEt