Synthesis of FddA via a Purine 3′-Deoxynucleoside
J . Org. Chem., Vol. 66, No. 22, 2001 7475
CDCl3) δ 8.34 (1H, s, H-2), 8.24 (1H, s, H-8), 6.20 (1H, bs, H-1′),
5.74 (1H, bs, H-2′), 4.4-4.6 (4H, m, H-3′, H-4′, H-5′ab), 2.20
(3H, s, 5′O-Ac), 2.14 (3H, s, 2′O-Ac); 1H NMR (300 MHz,
DMSO-d6) δ 8.26 (1H, s, H-2), 8.10 (1H, s, H-8), 6.16 (1H, m,
H-1′), 5.82 (1H, m, H-2′), 4.92 (1H, m, H-3′), 4.57 (1H, m, H-4′),
4.36 (2H, m, H-5′), 2.11 (3H, s, 5′O-Ac), 2.06 (3H, s, 2′O-Ac);
13C NMR (75 MHz, CDCl3) δ 170.4, 158.8, 148.4, 146.0, 138.4,
124.2, 87.9, 83.0, 78.6, 64.7, 20.7; IR (KBr) 1750, 1698, 1376,
1226, 1044 cm-1; UV (MeOH) λmax 206, 245 nm; HRMS (FAB+)
calcd for C14H16N4O6Br (M + H)+ 415.0253, found 415.0248.
2′,5′-Di-O-a cetyl-3′-d eoxyin osin e (7). To a solution of
9-(2,5-di-O-acetyl-3-bromo-3-deoxy-â-D-xylofuranosyl)-1,9-dihy-
dro-6H-purin-6-one (4.31 g, 10.4 mmol) in toluene (77 mL) were
added tributyltin hydride (8.63 mL, 31.1 mmol) and 2,2′-
azobisisobutyronitrile (147 mg, 0.893 mmol). After being
stirred for 2 h at 90 °C, the reaction mixture was immediately
cooled to 0 °C and poured into petroleum ether (41 mL). HPLC
analysis showed that the desired product was obtained in
92.2% yield (3.22 g, 9.57 mmol). The resulting precipitate was
filtered and recrystallized sequentially from ethanol (54 mL)
and acetonitrile/water (5/1, 42 mL). The resulting crystals were
filtered and dried at 40 °C under reduced pressure to give an
analytical sample of the desired product (2.34 g, 6.97 mmol,
67.0% yield) as white crystals: mp 242-244 °C; 1H NMR (300
MHz, CDCl3) δ 8.08 (1H, s, H-2), 8.07 (1H, s, H-8), 6.04 (1H,
d, J ) 1.1 Hz, H-1′), 5.59 (1H, bd, J ) 5.9 Hz, H-2′), 4.60 (1H,
m, H-4′), 4.39 (1H, dd, J ) 12.3, 2.9 Hz, H-5′a), 4.22 (1H, dd,
J ) 12.3, 5.2 Hz, H-5′b), 2.50 (1H, ddd, J ) 14.0, 10.5, 5.9 Hz,
H-3′a), 2.16 (1H, ddd, J ) 14.0, 5.8, 1.1 Hz, H-3′b), 2.09 (3H,
2.01-2.32 (1H, m, H-3′b), 2.13 (3H, s, 5′O-Ac), 1.97 (3H, s, 2′O-
Ac); 13C NMR (75 MHz, DMSO-d6) δ 170.3, 170.1, 152.0, 151.3,
149.6, 146.0, 131.5, 89.2, 78.6, 77.4, 64.5, 32.4, 20.9, 20.6; IR
(neat) 1745, 1674, 1592, 1562, 1387, 1339, 1232, 1094, 1053
cm-1; HRMS (FAB+) calcd for C14H16N4O5Cl (M + H)+
355.0809, found 355.0816.
6-Ch lor o-9-(3-d eoxy-â-D-er yth r o-p en t ofu r a n osyl)-9H -
p u r in e (9). To a solution of 6-chloro-9-(2,5-di-O-acetyl-3-deoxy-
â-D-erythro-pentofuranosyl)-9H-purine (20.8 g, 58.6 mmol) in
methanol (62.3 mL) was added 28% sodium methoxide in
methanol (2.89 mL, 14.2 mmol) at 10 °C. After being stirred
for 3 h at room temperature, this reaction mixture was cooled
to 5 °C. HPLC analysis showed that the desired product was
obtained in quantitative yield. Evaporation of the solvent gave
precipitate which was crystallized from methanol/water to give
the desired product (14.9 g, 55.2 mmol, 94.1% yield) as white
crystals. An analytical sample was obtained by recrystalliza-
tion from methanol/water: mp 180-181 °C; 1H NMR (300
MHz, CDCl3) δ 8.68 (1H, s, H-2), 8.33 (1H, s, H-8), 5.83 (1H,
d, J ) 4.6 Hz, H-1′), 4.92 (1H, ddd, J ) 7.2, 6.5, 4.6 Hz, H-2′),
4.53-4.59 (1H, m, H-4′), 3.98 (1H, dd, J ) 12.5, 2.1 Hz, H5′-
a), 3.60 (1H, dd, J ) 12.5, 2.6 Hz, H5′-b), 2.53 (1H, ddd, J )
12.9, 7.2, 5.7 Hz, H3′-a), 2.18 (1H, ddd, J ) 12.9, 8.0, 6.5 Hz,
H3′-b); 1H NMR (300 MHz, DMSO-d6) δ 8.97 (1H, s, H-2), 8.82
(1H, s, H-8), 6.06 (1H, d, J ) 1.4 Hz, H-1′), 5.80 (1H, s, J )
3.9 Hz, 2′-OH), 5.12 (1H, dd, J ) 5.3, 5.2 Hz, 5′-OH), 4.62-
4.68 (1H, m, H-2′), 4.42-4.50 (1H, m, H-4′), 3.78 (1H, ddd, J
) 12.1, 5.3, 3.2 Hz, H-5′a), 3.59 (1H, ddd, J ) 12.1, 5.2, 3.8
Hz, H-5′b), 2.28 (1H, ddd, J ) 13.3, 9.6, 5.3 Hz, H-3′a), 1.93
(1H, ddd, J ) 13.3, 6.0, 2.2 Hz, H-3′b); 13C NMR (75 MHz,
DMSO-d6) δ 151.8, 151.3, 149.3, 145.4, 131.5, 91.6, 81.9, 75.2,
62.1, 33.6; IR (KBr) 3331, 1596, 1562, 1442, 1405, 1391, 1337,
1207, 1129, 1079, 1068 cm-1; UV (MeOH) λmax 204, 265 nm;
HRMS (FAB+) calcd for C10H12N4O3Cl (M + H)+ 271.0598,
found 271.0584.
6-Ch lor o-9-[3-d eoxy-5-O-(tr ip h en ylm eth yl)-â-D-er yth r o-
p en tofu r a n osyl]-9H-p u r in e (10). To a solution of 6-chloro-
9-(3-deoxy-â-D-erythro-pentofuranosyl)-9H-purine (20.0 g, 98.9%
purity, 73.1 mmol) in acetonitrile (140 mL) were added 2,4,6-
collidine (11.6 mL, 87.8 mmol) and trityl chloride (22.4 g, 80.4
mmol). After being stirred for 3 h at 45 °C, methanol (1.48
mL) was added to the reaction mixture. After additional
stirring for 1 h at room temperature, the reaction mixture was
concentrated under reduced pressure. The residue was dis-
solved in dichloromethane (200 mL) and water (100 mL),
acidified (pH 3.0) with 6 N hydrogen chloride, and separated
into layers. The organic layer was again mixed with water (100
mL), acidified (pH 3.0) with 6 N hydrogen chloride, and
separated into layers. The organic layer was mixed with water
(100 mL), neutralized (pH 7.0) with saturated aqueous sodium
hydrogencarbonate, and separated into layers. The organic
layer was dried over sodium sulfate and concentrated. The
residue was concentrated with benzotrifluoride (220 mL) and
then crystallized from benzotrifluoride (180 mL). The resulting
crystals were filtered and dried at 40 °C under reduced
pressure to give the desired product (31.9 g, 62.2 mmol, 85.1%
yield) as white crystals: mp 205-206 °C; 1H NMR (300 MHz,
CDCl3) δ 8.64 (1H, s, H-2), 8.40 (1H, s H-8), 7.21-7.41 (15H,
m, 5′O-Tr), 6.04 (1H, d, J ) 2.2 Hz, H-1′), 4.85-4.91 (1H, m,
H-2′), 4.68-4.78 (1H, m, H-4′), 3.44 (1H, dd, J ) 10.6, 3.1 Hz,
H-5′a), 3.33 (1H, dd, J ) 10.6, 4.6 Hz, H-5′b), 2.30 (1H, ddd, J
) 13,3. 7.7, 5.6 Hz, H-3′a), 2.17 (1H, ddd, J ) 13.3, 6.5, 3.9
Hz, H-3′b); 13C NMR (75 MHz, CDCl3) δ 151.4, 151.2, 150.4,
146.7, 143.3, 132.4, 128.5, 127.8, 127.2, 93.1, 87.0, 80.7, 76.0,
64.7, 33.9; IR (KBr): 3354, 3059, 1592, 1562, 1491, 1449, 1400,
1338, 1206, 1130, 1078, 1018 cm-1; UV (MeOH) λmax: 207, 265
nm; HRMS (FAB+) calcd for C29H26N4O3Cl (M + H)+ 513.1693,
found 513.1717. Anal. Calcd for C29H25N4O3Cl: C, 67.90; H,
4.91; N, 10.92. Found: C, 67.92; H, 4.95; N, 10.76.
1
s, 5′O-Ac), 2.04 (3H, s, 2′O-Ac); H NMR (300 MHz, DMSO-
d6) δ 8.26 (1H, s, H-2), 8.10 (1H, s H-8), 6.11 (1H, d, J ) 1.4
Hz, H-1′), 5.61 (1H, bd, J ) 6.3 Hz, H-2′), 4.52 (1H, m, H-4′),
4.29 (1H, dd, J ) 12.0, 2.9 Hz, H-5′a), 4.16 (1H, dd, J ) 12.0,
5.8 Hz, H-5′b), 2.60 (1H, ddd, J ) 14.1, 10.3, 6.3 Hz, H-3′a),
2.22 (1H, ddd, J ) 14.1, 5.9, 1.1 Hz, H-3′b), 2.10 (3H, s, 5′O-
Ac), 1.99 (3H, s, 2′O-Ac); 13C NMR (75 MHz, DMSO-d6) δ 170.3,
170.1, 156.7, 147.9, 146.2, 138.9, 124.6, 88.6, 78.2, 77.7, 64.6,
32.6, 20.9, 20.7; IR (KBr) 1746, 1724, 1707, 1419, 1344, 1230,
1205, 1122, 1101 cm-1; UV (MeOH) λmax 203, 245 nm; HRMS
(FAB+) calcd for C14H17N4O6 (M + H)+ 337.1148, found
337.1153.
6-Ch lor o-9-(2,5-d i-O-a cetyl-3-d eoxy-â-D-er yth r o-p en to-
fu r a n osyl)-9H-p u r in e (8). Rea ction w ith Vilsm eier Re-
a gen t. To a suspension of 2′,5′-di-O-acetyl-3′-deoxyinosine
(2.89 g, 8.60 mmol) in dichloromethane (40 mL) were added
dimethylformamide (1.92 mL, 24.8 mmol) and thionyl chloride
(1.81 mL, 24.8 mmol). After being stirred for 6 h at reflux, the
reaction mixture was cooled to 10 °C and poured into ice-
water (500 mL). The reaction mixture was separated into
layers, and the organic layer was washed with aqueous
saturated sodium hydrogencarbonate (× 2). The organic layer
was concentrated in vacuo to give the desired product (2.87 g,
8.09 mmol, 94.1% yield) as a colorless foam.
Rea ction w ith P OCl3 a n d P h a se-Tr a n sfer Ca ta lyst. To
a suspension of 2′,5′-di-O-acetyl-3′-deoxyinosine (1.00 g, 2.97
mmol) in acetonitrile (4.5 mL) were added N,N-dimethylaniline
(0.81 mL, 6.4 mmol), tetraethylammonium chloride (736 mg,
4.44 mmol), and phosphorus oxychloride (0.62 mL, 6.7 mmol).
After being stirred for 2 h at reflux, the reaction mixture was
cooled to room temperature and poured into dichloromethane/
ice-water. The reaction mixture was separated into layers,
and the organic layer was washed with aqueous saturated
sodium hydrogencarbonate and water. The organic layer was
dried over sodium sulfate and concentrated in vacuo to give
the desired product (1.04 g, 2.94 mmol, 99.0% yield) as a
colorless foam: 1H NMR (300 MHz, CDCl3) δ 8.77 (1H, s, H-2),
8.32 (1H, s, H-8), 6.15 (1H, d, J ) 1.3 Hz, H-1′), 5.74 (1H, d, J
) 5.8 Hz, H-2′), 4.63-4.74 (1H, m, H-4′), 4.46 (1H, dd, J )
12.3, 2.8 Hz, H-5′a), 4.30 (1H, dd, J ) 12.3, 5.1 Hz, H-5′b),
2.65 (1H, ddd, J ) 14.1, 10.6, 6.0 Hz, H-3′a), 2.27 (1H, ddd, J
) 14.1, 5.6, 1.3 Hz, H-3′b), 2.17 (3H, s, 5′O-Ac), 2.08 (3H, s,
2′O-Ac); 1H NMR (300 MHz, DMSO-d6) δ 8.85 (2H, s, H-2, H-8),
6.31 (1H, s, H-1′), 5.76 (1H, s, H-2′), 4.55-4.64 (1H, m, H-4′),
4.32 (1H, dd, J ) 12.1, 2.8 Hz, H-5′a), 4.22 (1H, dd, J ) 12.1,
5.8 Hz, H-5′b), 2.67 (1H, ddd, J ) 14.2, 10.3, 6.1 Hz, H-3′a),
6-Ch lor o-9-[2,3-dideoxy-2-flu or o-5-O-(tr iph en ylm eth yl)-
â-D-th r eo-p en tofu r a n osyl]-9H-p u r in e (11) a n d 6-Ch lor o-
9-[2,3-d id eoxy-2,3-d id eh yd r o-5-O-(tr ip h en ylm eth yl)-â-D-
er yth r o-p en tofu r a n osyl]-9H-p u r in e (12). Rea ction w ith
DAST. To a solution of 6-chloro-9-[3-deoxy-5-O-(triphenyl-
methyl)-â-D-erythro-pentofuranosyl]-9H-purine (104 mg, 0.202