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M. Arslan et al.
J Enzyme Inhib Med Chem, Early Online: 1–5
Materials and methods
30 mmol, 3 eq.), (Benzotriazol-1-yloxy)tris(dimethylamino)phos-
phonium hexafluorophosphate (BOP) (4.42 g, 10 mmol, 1 eq.) and
benzylamine (1.07 g, 10 mmol, 1 eq.) were added. The mixture
Chemicals
The CNBr-activated Sepharose 4B, protein assay reagents, was stirred at room temperature for 6 h. The precipitate was
p-aminobenzene sulphonamide, L-tyrosine, 4-nitrophenylacetate filtered off and then washed with acetonitrile. The filtrate was
(4-NPA) and chemicals for electrophoresis were purchased from evaporated under vacuum, taken up with ethyl acetate then
Sigma-Aldrich Co. (St Louis, MO). All other chemicals were of washed with 20 ml of 2N HCl solution, 20 ml of saturated
analytical grade and obtained from either Sigma or Merck NaHCO3 solution and with 20 ml of a saturated solution of NaCl.
(Darmstadt, Germany). Reagents for syntheses of compounds 10– The product was purified by column chromatography on silica gel
13; L-(+)-tartaric acid, benzylamine, aniline, cyclohexylamine, eluting with mixture of ethyl acetate-hexane (2:1) to yield a white
3,5-dihydroxybenzoic acid and triethylamine were purchased solid (65%), m.p. 213–215 ꢁC. FT-IR (cmꢀ1): 3380, 3301, 3035,
1
from Aldrich and (benzotriazol-1-yloxy) tris (dimethylamino) 1655, 1536, 1154, 997. H-NMR (400 MHz, DMSO-d6): ꢀ 9.48
phosphonium hexafluorophosphate (BOP reagent) from Alfa (s, 2H, –OH), 8.83 (t, J ¼ 6.03 Hz, 1H, –NH), 7.33–7.19 (m, 5H,
Aesar (Ward Hill, MA). Other common chemicals and solvents ArH), 6.70(d, J ¼ 2.15 Hz, 2H, H2 and H6), 6.35 t, J ¼ 2.15 Hz,
are commercially available and were used after distillation or 1H, H4), 4.40(d, J ¼ 6.03 Hz, 2H, PhCH2). 13C-NMR (100 MHz,
treatment with drying agents. Progress of reactions was monitored DMSO-d6): ꢀ 166.5, 158.3, 139.9, 136.6, 128.2, 127.1, 126.6,
by thin layer chromatography (Merck, TLC Silica gel 60 F254) in a 105.4, 105.1, 42.5. ANAL. FOUND: C, 68.87; H, 5.64; N, 5.60. Calcd
suitable solvent system. Column chromatography was performed for C14H13NO3: C, 69.12; H, 5.39; N, 5.76.
on Merck Silica Gel 60 (70–230 mesh). Melting points were
determined with a Reichert thermovar micro melting point Synthesis of 3,5-dihydroxy-N-(cyclohexyl)benzamide (13)
apparatus and are uncorrected. Nuclear magnetic resonance
In a flask, 3,5-dihydroxybenzoic acid (1.54 g, 10 mmol, 1 eq.) was
(NMR) spectra were taken on a Bruker Ultra Shield Plus 400
dissolved in 20 ml of acetonitrile, and triethylamine (4.18 ml,
operating at 400 MHz for 1H- and 100 MHz for 13C-nuclei. NMR
30 mmol, 3 eq.), (benzotriazol-1-yloxy)tris(dimethylamino)phos-
spectra were recorded in deutorated dimethyl sulfoxide (DMSO-
phonium hexafluorophosphate (BOP) (4.42 g, 10 mmol, 1 eq.)
d6) solvent using TMS as internal standard and chemical shifts
and cyclohexylamine (0.99 g, 10 mmol, 1 eq.) were added.
referred to ꢀ were expressed in parts per million, ppm. FT-IR
The mixture was stirred at room temperature for 6 h and then
spectra were measured with a Perkin–Elmer BXII ATR spec-
the precipitate was filtered off by washing with acetonitrile. The
trometer. Elemental analyses were carried out by a Carlo Erba
filtrate was evaporated under vacuum and taken up with ethyl
1106 instrument.
acetate. Successive washings with 20 ml of a solution of 2N HCl,
20 ml of saturated NaHCO3 solution and 20 ml of a saturated
solution NaCl provided the crude. The product was purified by
Synthesis of (3R, 4R)-1-benzyl-3,4-dihydroxy-2,5-dioxopyrroli-
dine (10)
chromatography on silica (eluent: EtOAc/hexane: 2/1) to yield a
white solid (69%). Melting point 203–205 ꢁC. FT-IR (cmꢀ1):
Benzylamine (5.35 g, 0.05 mol) and L-(+)-tartaric acid (7.5 g,
3382, 3281, 1636, 1553, 1149, 858. 1H-NMR (400 MHz, DMSO-
0.05 mol) were refluxed in xylene overnight with a Dean-Stark
apparatus. The reaction mixture was cooled to ambient temperature
and resulting crystalline product was filtered off. After successive
d6): ꢀ 9.39 (s, 2H, –OH), 7.97 (t, J ¼ 8.02 Hz, 1H, –NH), 6.64
(d, J ¼ 2.14 Hz, 2H, H2 and H6), 6.32(t, J ¼ 2.10 Hz, 1H, H4),
1.76–1.04 (m, 11H, aliphatic hydrogens). 13C-NMR (100 MHz,
washing with portions of hexane, crude product was recrystallized
from ethanol to give product as pale yellow solid, 83%, m.p. 198–
DMSO-d6): ꢀ 165.6, 158.1, 137.1, 105.4, 104.8, 48.1, 32.3, 25.2,
200 ꢁC (200–201 ꢁC)15. FT-IR (cmꢀ1): 3189 br, 2885, 1710, 1452,
24.9. Anal. found: C, 66.81; H, 7.45; N, 5.87. Calcd for
C13H17NO3: C, 66.36; H, 7.28; N, 5.95.
1390, 1155, 1099, 1003. 1H-NMR (400 MHz, DMSO-d6): ꢀ 7.35–
7.23 (m, 5H, ArH), 6.30 (d, J ¼ 5.24 Hz, 2H, –OH), 4.55 (d,
J ¼ 7.22 Hz, 2H, –CH, H3 and H4), 4.38 (d, J ¼ 4.62 Hz, 2H,
CA purification assay
–PhCH2). 13C NMR (100 MHz, DMSO-d6): ꢀ 174.6, 135.9, 128.5,
127.5, 127.5, 74.5, 41.1. Anal. found: C, 59.51; H, 5.07; N, 6.27.
Purification of two human CA isozymes (hCA I and hCA II)
were previously described with a simple one-step method by a
Calcd for C11H11NO4: C, 59.73; H, 5.01; N, 6.33.
Sepharose-4Baniline-sulfanilamide affinity column chromatog-
17,18
Synthesis of (3R, 4R)-1-phenyl-3,4-dihydroxy-2,5-dioxopyrroli-
dine (11)
raphy
.
CA activity assay and kinetic studies
Freshly distilled aniline (4.65 g, 0.05 mol) and L-(+)-tartaric acid
(7.5 g, 0.05 mol) were refluxed in xylene with a Dean-Stark
apparatus. After overnight reaction, the resulting crystalline
product was filtered off and washed several times with hexane.
Recrystallization from ethanol provided white crystalline product
with 87% yield, m.p. 248–250 ꢁC (249–250 ꢁC).16 FT-IR (cmꢀ1):
3338 br, 3064, 1710, 1497, 1393, 1182, 1103, 999. 1H-NMR
(400 MHz, DMSO-d6): ꢀ 7.51–7.39 (m, 3H, ArH), 7.32–7.30 (m,
2H, ArH), 6.39 (dd, J ¼ 4.64 Hz and J ¼ 1.78 Hz, 2H, –OH), 4.57
(dd, J ¼ 4.69 Hz and J ¼ 1.65 Hz, 2H, –CH, H3 and H4).
13C-NMR (100 MHz, DMSO-d6): ꢀ 174.0, 132.0, 128.9, 128.3,
126.9, 74.4. Anal. found: C, 58.11; H, 5.51; N, 6.54. Calcd for
C10H9NO4: C, 57.97; H, 4.38; N, 6.76.
CA activity was assayed by following the change in absorbance at
348 nm of 4-NPA to 4-nitrophenolate ion over a period of 3 min at
25 ꢁC using a spectrophotometer (Shimadzu UV–VIS, Kyoto,
Japan) according to the method described by Verpoorte et al.19
The inhibitory effects of compounds 1–13 and AZA were
examined. All compounds were tested in triplicate at each
concentration used. Control cuvette activity in the absence of
inhibitor was taken as 100%. For each inhibitor an Activity
%ꢀ[Inhibitor] graph was drawn. To determine KI values, three
different inhibitor concentrations were tested; In these experi-
ments, 4-NPA was used as substrate at five different concentra-
tions (0.15–0.75 mM). The Lineweaver–Burk curves were
drawn20. Regression analysis graphs were drawn for IC50 using
inhibition % values by a statistical package (SPSS for windows,
version 10.0; SPSS Inc., Chicago, IL) on a computer (Student’s t-
test; n: 3).
Synthesis of 3,5-dihydroxy-N-(benzyl)benzamide (12)
3,5-dihydroxybenzoic acid (1.54 g, 10 mmol, 1 eq.) was dissolved
in 20 ml of acetonitrile. To solution, triethylamine (4.18 ml,