1846
M.G.Ferlin et al./ Bioorg.Med.Chem.9 (2001) 1843–1848
As far as the mechanism of action is concerned, topoi-
somerase II-mediated DNA damage does not seem to
be the major cause of cell death. In fact, considering the
potency exhibited by the novel compounds, enzyme-
mediated DNA cleavage could hardly be detected in the
range of drug concentrations at which remarkable
cytotoxic effects are observed. In addition the order of
potency does not follow that of cleavage stimulation. In
fact, compound 10, not showing any evidence of topoi-
somerase-mediated effects, is more effective than com-
pound 8, the latter behaving as a topoisomerase II
poison at high concentration (100 mM). On the other
hand, compound 9 is active against leukemia cells at
sub-micromolar concentration, while it causes no
enzyme poisoning up to 10 mM. Hence, despite the
structural similarity with m-AMSA shown by the test
compounds, they have lost their ability to interfere effi-
ciently with topoisomerase II at cytotoxic concentra-
tions. Moreover, in analogy to our previous findings on
important biological pathways.
A COMPARE10 analysis was performed using the toxi-
city data obtained with all new derivatives. This could
unravel mechanism(s) of action in common with other
previously identified anticancer drugs. The rank of
similarity showed that the test drugs can be related to
compounds belonging to different chemical classes (see,
for example, NSC 71633 and NSC 134120 having a high
correlation with compound 9). In general, they are
mono- or bicyclic compounds, with amide, sulfonamide
or ester side chains. Amsacrine or related analogues
were never found in the list of the 20 most probable hits,
which confirms lack of similarity in the mechanism of
cytotoxic action.
Finally, it is interesting to compare the newly reported
1-substituted drugs with the previously tested con-
geners, either substituted at position 9 or having posi-
tions 1 and 9 linked through an extra cycle. Indeed, it
appears that the position and rigidity of the side-chain
modulates drug activity to a significant extent. In fact,
3
3
the parent 9-substituted derivatives, we tend to rule out
a topoisomerase I-related mechanism. As a result, the
observed tumor cell growth inhibition by pyrrolo-qui-
nolines should primarily rest on the impairment of other
0
the rank of potency in the present series is in favor of 2
Table 1. Analytical data for compounds 2–7
ꢀ
ꢁ1
1
a
Compound
Yield %
81
Mp ( C)
IR (cm
)
H NMR d (ppm)
2
ab
b
181–
c
Ref 12
Ref 12
1
82
268
2
78
3357, 3185,
1640, 1373
12.26 (1H, bs, NH), 9.36 (1H, d, J9,8=8.69 Hz, HC-9), 8.20 (1H, d,
4,5=8.94 Hz, HC-4), 7.98 (1H, d, J5,4=8.94 Hz, HC-5), 7.92 (1H, d,
d
(
dec)
J
J
8,9=8.69 Hz, HC-8), 7.73 (1H, t, J2,1ꢁ2,3=2.61 Hz, HC-2), 7.36 (1H,
3
bt, J1,2=2.42 Hz, J1,3=2.16 Hz HC-1), 2.94 (3H, s, CH )
3a
52
280–
c
3106, 825,
2734, 1659
9.99 (1H, s, ald.), 9.75 (1H, dd, J9,7=1.7 Hz, J9,8=8.5 Hz, HC-9), 8.86 (1H, dd,
2
83
J7,9=1.7 Hz, J7,8=4.2 Hz, HC-7), 8.54 (1H, s, HC-2), 7.96 (1H, d, J4,5=9.1 Hz,
HC-4), 7.89 (1H, d, J5,4=9.1 Hz, HC-5), 7.61 (1H, dd, J8,7=4.2 Hz,
J8,9=8.5 Hz, HC-8)
3
4
b
62
60
246–
c
3096,2895–
2815, 2714,
10.31 (1H, d, J9,8=8.5 Hz, HC-9), 10.04 (1H, s, H ald.), 8.70 (1H, d,
2,3=2.2 Hz, HC-2), 8.23 (1H, d, J4,5=9 Hz, HC-4), 8.13 (1H, d, J5,4=9 Hz,
2
48
J
1
669
3475, 3015,
309
HC-5), 7.91 (1H, d, J8,9=8.5 Hz, HC-8), 2.89 (3H, s, CH
3
)
184d
11.60 (1H, bs, NH ind.), 8.99 (1H, s, amide NH), 8.72 (1H, d, J7,8=4.31 Hz,
HC-7), 8.59 (1H, d, J9,8=7.9 Hz, HC-9), 7.84 (1H, d, J4,5=8.95 Hz, HC-4), 7.69
1H, d, J5,4=8.95 Hz, HC-5), 7.46 (1H, dd, J8,7=4.1 Hz, J8,9=7.9 Hz, HC-8), 7.50
1
(
0 0
3 ,5
1H, s, HC-2), 7.01 (2H, d, J =8.51 Hz, HC-3 and HC-5 ), 6.73 (2H, d,
0 0
(
0
0
J
2
0
,6
0
=8.59 Hz, HC-2 and HC-6 ), 5.97 (1H, bt, JNH,CH2=4.76 Hz, amine NH),
.57 (2H, d, JCH2,NH=4.76 Hz, CH ), 2.84 (3H, s, CH
4
2
3
)
5
6
65
50
223d
3418-3367,
11.62 (1H, bs, indolic NH), 9.09 (1H, bs, amide NH), 8.73 (1H, d, J7,8=4.3 Hz,
HC-7), 8.60 (1H, d, J9,8=7.61 Hz, HC-9), 7.84 (1H, d, J4,5=8.96 Hz, HC-4), 7.7
(1H, d, J5,4=8.96 Hz, HC-5), 7.48 (2H, m, HC-2 and HC-8), 6.76 (3H, m,
aromatic), 4.77 (1H, t, JNH,CH2=4.77 Hz, amine NH), 4.65 (2H, d,
3
2
287, 3126,
905, 1604,
1
147
J
CH2,NH=4.77 Hz, CH
11.53 (1H, bs, indolic NH), 8.99 (1H, bs, amide NH), 8.48 (1H, d,
9,8=8.46 Hz, HC-9), 7.78 (1H, d, J4,5=8.9 Hz, HC-4), 7.60 (1H, d, J5,4=8.9 Hz,
HC-5), 7.47 (1H, d, J2,3=2.28 Hz, HC-2), 7.35 (1H, d, J8,9=8.46 Hz, HC-8), 7.00
2 3 3 2
), 3.70 (3H, s,-OCH ), 2.87 (3H, s, CH SO )
220–
d
3367-3307,
3066, 1604-
2
21
J
1
510, 1307
0
0
0
(
2H, d, J
3
0
,5
0
=8.71 Hz, HC-3 and HC-5 ), 6.72 (2H, d, J
0
2
0
,6
0
=8.79 Hz, HC-2
and HC-6 ), 5.95 (1H, t, JNH,CH2=4.68 Hz, amine NH), 4.55 (2H, d,
2 3 2 3
JCH2,NH=4.68 Hz, CH ), 2.84 (3H, s, CH -SO ), 2.62 (3H, s, CH )
7
52
221–
d
3548, 3377,
1313, 1257-
11.53 (1H, bs, indolic NH), 9.09 (1H, bs, amide NH), 8.48 (1H, d, J9,8=8.6 Hz,
HC-9), 7.78 (1H, d, J4,5=8.9 Hz, HC-4), 7.60 (1H, d, J5,4=8.9 Hz, HC-5), 7.46
(1H, d, J2,3=2.48 Hz, HC-2), 7.35 (1H, d, J8,9=8.6 Hz, HC-8), 6.81–6.71 (3H,
m, aromatic), 4.72 (1H, bt, JNH,CH2=4.4 Hz, amine NH), 4.63 (2H, bd,
2
24
1
031, 1142
J
CH2,NH=4.4 Hz, CH
2
3 2 3
), 3.70 (3H, s,–OCH ), 2.87 (3H, s, SO CH ), 2. 62 (3H, s,
CH
3
)
a
6
Solvent: DMSO-d .
b
Ref 12.
Recrystallized from CH
c
3
OH.
Recrystallized from C H OH.
d
2 5