86163-17-9

Basic information

• Product Name: (E)-5-(2-CARBOMETHOXYVINYL)-2'-DEOXYURIDINE
• Synonyms: (E)-5-(2-CARBOMETHOXYVINYL)-2'-DEOXYURIDINE;2-Propenoic acid,3-[1-(2-deoxy-b-D-erythro-pentofuranosyl)-1,2,3,4-tetrahydro-2,4-dioxo-5-pyriMidinyl]-,Methyl ester, (2E)-
• CAS NO: 86163-17-9
• Molecular Formula: C₁₃H₁₆N₂O₇
• Molecular Weight: 312.28
• Mol File: 86163-17-9.mol
• Article Data: 15

Chemical Properties

• Appearance: /
• Density: 1.540±0.06 g/cm3(Predicted)
• Solubility: Acetone; Dichloromethane; DMSO
• PKA: 8.51±0.10(Predicted)
• CAS DataBase Reference: (E)-5-(2-CARBOMETHOXYVINYL)-2'-DEOXYURIDINE(CAS DataBase Reference)
• NIST Chemistry Reference: (E)-5-(2-CARBOMETHOXYVINYL)-2'-DEOXYURIDINE(86163-17-9)
• EPA Substance Registry System: (E)-5-(2-CARBOMETHOXYVINYL)-2'-DEOXYURIDINE(86163-17-9)

Safety Data

• Hazardous Substances Data: 86163-17-9(Hazardous Substances Data)

Usage

Uses

(E)-5-(2-Carbomethoxyvinyl)-2’-deoxyuridine is a derivative of 5-(2-Hydroxyethyl)-2’-deoxyuridine (H942060), which is a novel type of potent antiviral nucleoside analog.

Upstream product

• 54-42-2 5-Iodo-2'-deoxyuridine 
• 292638-85-8 acrylic acid methyl ester 
• 951-78-0 2'-deoxyuridine 
• 65505-76-2 5-chloromercuri-2'-deoxyuridine 
• 611-53-0 5-Iodo-2'-deoxycytidine 
• 76772-94-6 5-Iodo-4-trimethylsilanyloxy-1-((2R,4S,5R)-4-trimethylsilanyloxy-5-trimethylsilanyloxymethyl-tetrahydro-furan-2-yl)-1H-pyrimidin-2-one 

Downstream Products

• 1056651-21-8 5'-O-(4,4'-dimethoxytrityl)-5-(2-[2-[N,N-bis(2-trifluoroacetamidoethyl)]aminoethyl]carbamoyl-(E)-vinyl)-2'-deoxyuridine 
• 1056651-22-9 5'-O-(4,4'-dimethoxytrityl)-5-(2-[2-[N,N-bis(2-trifluoroacetamidoethyl)]aminoethyl]carbamoyl-(E)-vinyl)-2'-deoxyuridine 3'-[(2-cyanoethyl)(N,N-diisopropyl)]phosphoramidite 
• 840506-24-3 (E)-5-(2-bromovinyl)-2’-deoxyuridine-5’-(1-phenylmethoxy-L-phenylalanyl)phosphate 

Relevant articles and documents

Nucleic acid probe, method for designing nucleic acid probe, and method for detecting target sequence

The present invention provides a nucleic acid probe that can achieve high detection sensitivity and high specificity in mutation detection, mismatch detection, etc. by the PCR method, a method for designing such a nucleic acid probe, and a method for detecting a target sequence. The nucleic acid probe includes a nucleic acid molecule, and the nucleic acid molecule includes a plurality of fluorescent dye moieties that exhibit an excitonic effect. At least two of the fluorescent dye moieties that exhibit an excitonic effect are bound to the same base or two adjacent bases in the nucleic acid molecule with each fluorescent dye moiety being bound via a linker (a linking atom or a linking atomic group). The extension-side end of the nucleic acid molecule is chemically modified, thereby preventing an extension reaction of the nucleic acid molecule.

Novel water-soluble phosphatriazenes: Versatile ligands for Suzuki-Miyaura, Sonogashira and Heck reactions of nucleosides

Two new water-soluble phosphatriazene ligands have been synthesized as versatile ligands for complexation reactions with Pd(OAc)2 and utilized for catalyzing column-free Suzuki-Miyaura cross-coupling of various purine and pyrimidine halonucleosides in water. The water-solubility of the catalytic system simplified the isolation of the cross-coupled products to mere filtration, while the catalytically active solution in the filtrate was recycled eight times. A novel copper-free Sonogashira coupling protocol for the nucleosides has also been established via a one-pot synthesis of FV-100, a nucleoside-based drug in phase 3 clinical trials for herpes zoster or shingles treatment. Application of the Heck reaction was demonstrated by the synthesis of another antiviral drug: BVDU.

COMPOUND, NUCLEIC ACID, METHOD FOR PRODUCING NUCLEIC ACID, AND KIT FOR PRODUCING NUCLEIC ACID

A compound is represented by the following formula (1), (2), or (3) (where, in the above formulae (1), (2), and (3), Z11 and Z12 independently have a fluorescent property and are an uncharged atomic group exhibiting an exciton effect).