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Cytidine,5-methyl-

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Name

Cytidine,5-methyl-

EINECS 218-390-8
CAS No. 2140-61-6 Density 1.79 g/cm3
PSA 130.83000 LogP -1.67340
Solubility N/A Melting Point 212-215 °C (dec.)(lit.)
Formula C10H15N3O5 Boiling Point 537.5 °C at 760 mmHg
Molecular Weight 257.246 Flash Point 278.9 °C
Transport Information N/A Appearance Light Yellow Crystals
Safety 26-36 Risk Codes 36/37/38
Molecular Structure Molecular Structure of 2140-61-6 (5-METHYLCYTIDINE) Hazard Symbols IrritantXi
Synonyms

3:PN: US20060035254 PAGE: 63 claimed sequence;5-Methylcytidine;NSC 363933;

Article Data 13

Cytidine,5-methyl- Synthetic route

59237-68-2

2',3',5'-tri-O-benzoyl-5-methylcytidine

2140-61-6

5-methylcytidine

Conditions
ConditionsYield
With sodium methylate In methanol for 14h; Ambient temperature;91%
With ammonia In methanol
117862-70-1

N4,5-dimethylcytidine

2140-61-6

5-methylcytidine

Conditions
ConditionsYield
With manganese(IV) oxide; C17H20N4O9P(1-)*Na(1+); oxygen In water; acetonitrile at 20℃; under 760.051 Torr; for 7h; Irradiation; chemoselective reaction;70%
7323-83-3

4-methoxy-5-methyl-1-(tri-O-benzoyl-β-D-ribofuranosyl)-1H-pyrimidin-2-one

2140-61-6

5-methylcytidine

Conditions
ConditionsYield
With ammonia In methanol at 100℃; for 21h;67%
28585-48-0

O2',O3',O5'-tribenzoyl-5-methyl-4-thio-uridine

2140-61-6

5-methylcytidine

Conditions
ConditionsYield
With ethanol; ammonia
107-71-1

tert-butyl peroxyacetate

65-46-3

CYTIDINE

A

10578-79-7

4-methylamino-1-(β-D-ribofuranosyl)pyrimidin-2(1H)-one

B

2140-64-9

N3-methylcytidine

C

2140-61-6

5-methylcytidine

Conditions
ConditionsYield
at 32℃; for 20h; Product distribution; Mechanism; Irradiation; solutions of pH 1.4 - 12.4;
6974-32-9

1-O-acetyl-2,3,5-tri-O-benzoyl-β-D-ribofuranose

2140-61-6

5-methylcytidine

Conditions
ConditionsYield
Multi-step reaction with 5 steps
1: SnCl4
2: NaHCO3 / H2O
3: 98 percent / Et3N; POCl3 / acetonitrile
4: NH3 / dioxane / 24 h / 20 °C
5: NH3 / methanol
View Scheme
Multi-step reaction with 2 steps
1: 99 percent / stannic chloride / acetonitrile / Ambient temperature
2: 67 percent / ammonia / methanol / 21 h / 100 °C
View Scheme
3180-76-5

2',3',5'-tri-O-benzoyluridine

2140-61-6

5-methylcytidine

Conditions
ConditionsYield
Multi-step reaction with 3 steps
1: 98 percent / Et3N; POCl3 / acetonitrile
2: NH3 / dioxane / 24 h / 20 °C
3: NH3 / methanol
View Scheme
Multi-step reaction with 2 steps
1: pyridine; P2S5
2: ethanol; NH3
View Scheme
163496-05-7

C33H27N5O8

2140-61-6

5-methylcytidine

Conditions
ConditionsYield
Multi-step reaction with 2 steps
1: NH3 / dioxane / 24 h / 20 °C
2: NH3 / methanol
View Scheme

C34H34N2O9Si

2140-61-6

5-methylcytidine

Conditions
ConditionsYield
Multi-step reaction with 4 steps
1: NaHCO3 / H2O
2: 98 percent / Et3N; POCl3 / acetonitrile
3: NH3 / dioxane / 24 h / 20 °C
4: NH3 / methanol
View Scheme
7288-28-0

2,4-bis(trimethylsiloxy)-5-methylpyrimidine

2140-61-6

5-methylcytidine

Conditions
ConditionsYield
Multi-step reaction with 5 steps
1: SnCl4
2: NaHCO3 / H2O
3: 98 percent / Et3N; POCl3 / acetonitrile
4: NH3 / dioxane / 24 h / 20 °C
5: NH3 / methanol
View Scheme

Cytidine,5-methyl- Specification

The Cytidine,5-methyl-, with CAS registry number 2140-61-6, belongs to the following product categories: (1)Biochemistry; (2)Nucleosides and their analogs; (3)Nucleosides, Nucleotides & Related Reagents; (4)Biochemicals and Reagents; (5)Nucleoside Analogs; (6)Nucleosides, Nucleotides, Oligonucleotides. It has the systematic name of 5-methylcytidine. And the chemical formula of this chemical is C10H15N3O5.

Physical properties of Cytidine,5-methyl-: (1)ACD/LogP: -1.35; (2)# of Rule of 5 Violations: 1; (3)ACD/LogD (pH 5.5): -1.35; (4)ACD/LogD (pH 7.4): -1.34; (5)ACD/BCF (pH 5.5): 1; (6)ACD/BCF (pH 7.4): 1; (7)ACD/KOC (pH 5.5): 4.36; (8)ACD/KOC (pH 7.4): 4.42; (9)#H bond acceptors: 8; (10)#H bond donors: 5; (11)#Freely Rotating Bonds: 5; (12)Polar Surface Area: 72.83 Å2; (13)Index of Refraction: 1.725; (14)Molar Refractivity: 57.06 cm3; (15)Molar Volume: 143.6 cm3; (16)Polarizability: 22.62×10-24cm3; (17)Surface Tension: 77.4 dyne/cm; (18)Density: 1.79 g/cm3; (19)Flash Point: 278.9 °C; (20)Enthalpy of Vaporization: 93.67 kJ/mol; (21)Boiling Point: 537.5 °C at 760 mmHg; (22)Vapour Pressure: 8.5E-14 mmHg at 25°C.

When you are using this chemical, please be cautious about it as the following:
The Cytidine,5-methyl- irritates to eyes, respiratory system and skin. When use it, wear suitable protective clothing, gloves and eye/face protection. If contact with eyes, rinse immediately with plenty of water and seek medical advice.

You can still convert the following datas into molecular structure:
(1)SMILES: O=C1/N=C(/N)\C(=C/N1[C@@H]2O[C@@H]([C@@H](O)[C@H]2O)CO)C
(2)InChI: InChI=1/C10H15N3O5/c1-4-2-13(10(17)12-8(4)11)9-7(16)6(15)5(3-14)18-9/h2,5-7,9,14-16H,3H2,1H3,(H2,11,12,17)/t5-,6-,7-,9-/m1/s1
(3)InChIKey: ZAYHVCMSTBRABG-JXOAFFINBK
(4)Std. InChI: InChI=1S/C10H15N3O5/c1-4-2-13(10(17)12-8(4)11)9-7(16)6(15)5(3-14)18-9/h2,5-7,9,14-16H,3H2,1H3,(H2,11,12,17)/t5-,6-,7-,9-/m1/s1
(5)Std. InChIKey: ZAYHVCMSTBRABG-JXOAFFINSA-N

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