1212
H.-M. Guo et al. / Bioorg. Med. Chem. Lett. 19 (2009) 1210–1213
4. (a) Prescher, J. A.; Bertozzi, C. R. Nat. Chem. Biol. 2005, 1, 13; (b) Antos, J. M.;
Francis, M. B. Curr. Opin. Chem. Biol. 2006, 10, 253.
rescent under a UV lamp (312 nm). Unmodified proteins were not
fluorescent on a gel under the UV lamp (data not shown). Gel anal-
ysis showed that lysozyme was most easily modified among pro-
teins tested (lane b). Mass analysis of the reaction mixture of
lysozyme with 8 showed the formation of the mono-addition prod-
uct.14 We previously demonstrated that the imine derivative
shown in Scheme 1, prepared from trans-diaminocyclohexane,
selectively reacted at tyrosine and did not react with other natural
amino acid residues except cysteine thiol.7 Thus, reaction of 8 with
lysozyme probably occurred at tyrosine. Cytochrome C was not la-
beled with 8 under the conditions used (lane f). Myoglobin and car-
5. (a) Link, A. J.; Tirrell, D. A. J. Am. Chem. Soc. 2003, 125, 11164; (b) Agard, N. J.;
Prescher, J. A.; Bertozzi, C. R. J. Am. Chem. Soc. 2004, 126, 15046; (c) Saxon, E.;
Bertozzi, C. R. Science 2000, 287, 2007; (d) Dirksen, A.; Hackeng, T. M.; Dawson, P. E.
Angew. Chem., Int. Ed. 2006, 45, 7581; (e) Crich, D.; Banerjee, A. J. Am. Chem. Soc.
2007, 129, 10064; (f) Tanaka, K.; Masuyama, T.; Hasegawa, K.; Tahara, T.; Mizuma,
H.; Wada, Y.; Watanabe, Y.; Fukase, K. Angew. Chem., Int. Ed 2008, 47, 102.
6. (a) Tanaka, F.; Fuller, R.; Asawapornmongkol, L.; Warsinke, A.; Gobuty, S.;
Barbas, C. F., III Bioconj. Chem. 2007, 18, 1318; (b) Tanaka, F.; Fuller, R. Bioorg.
Med. Chem. Lett. 2006, 16, 4059.
7. Minakawa, M.; Guo, H.-M.; Tanaka, F. J. Org. Chem. 2008, 73, 8669.
8. (a) Joshi, N. S.; Whitaker, L. R.; Francis, M. B. J. Am. Chem. Soc. 2004, 126, 15942;
(b) McFarland, J. M.; Joshi, N. S.; Francis, M. B. J. Am. Chem. Soc. 2008, 130, 7639.
9. (a) Hooker, J. M.; Kovacs, E. W.; Francis, M. B. J. Am. Chem. Soc. 2004, 126, 3718; (b)
Tilley, S. D.; Francis, M. B. J. Am. Chem. Soc. 2006, 128, 1080; (c) Hass, J. A.; Frederick,
M. A.;Fox,B.G.ProteinExpr. Purif.2000, 20, 274;(d)Koshi,Y.;Nakata, E.;Miyagawa,
M.; Tsukiji, S.; Ogawa, T.; Hamachi, I. J. Am. Chem. Soc. 2008, 130, 245.
10. Compound 2. To a mixture of Mn(OAc)3Á2H2O (16.1 g, 60 mmol) and NaN3 (6.50 g,
100 mmol) in CH3CN (180 mL), compound 1 (2.75 mL, 20 mmol) was added
followed by trifluoroacetic acid (TFA, 20 mL) at À20 °C under Ar.11 After 5 min, the
mixturewas added tosaturated NaHSO3 and extracted withCH2C12. Usualworkup
and purification by silica gel flash column chromatography afforded 27 (3.83 g,
85%).Compound 3. To a solution of 2 (3.38 g, 17 mmol) in THF (20 mL) was added a
solution of LiOH (1.43 g, 34 mmol) in water (20 mL) at room temperature and the
mixture was stirred for 15 h. After THF was evaporated in vacuo, 3 N HCl was
added to adjust the pH to 3 and the mixture was extracted with CH2C12. Usual
workup and purification by silica gel flash column chromatography (EtOAc/
hexane) afforded 3 (3.27 g, 98%). 1H NMR (400 MHz, CDCl3): d 11.1 (br s, 1H), 3.94
to 3.49 (m, 1H), 3.42 to 3.21 (m, 1H), 2.82 to 2.68 (m, 1H), 2.46 to 2.27 (m, 1H), 2.16
to 1.85 (m, 2H), 1.83 to 1.40 (m, 3H).
bonic anhydrase were slightly modified (lanes
d
and e).15
Chymotrypsinogen was hydrolyzed into small fragments by autol-
ysis and by catalysis of generated chymotrypsin under the condi-
tions used (lane c). Due to this hydrolysis, we were unable to
evaluate labeling of chymotrypsinogen with 8. These results indi-
cated that 8 did not inhibit the serine protease activity under the
conditions used; this implies that the nucleophilic serine in the ac-
tive site of chymotrypsin did not efficiently react with imine 8.
Mass analysis of the reaction of 8 with lysozyme at 48 h sug-
gested that the reaction of 8 was slower than that of the imine syn-
thesized from trans-cyclohexanediamine shown in Scheme 1. We
previously observed that reaction of the trans-isomer of the imine
shown in Scheme 1 was faster than the corresponding cis-isomer.7
Relative stereochemistries of the two nitrogen functionalities and
the amide carbonyl group on the cyclohexane ring of 8 may affect
the reactivity of the imine moiety. In order to increase the reaction
rate, stereoselective synthesis of 8 may be required. Alternatively,
introduction of moieties that provide noncovalent interactions
with the target protein may be used to enhance the reaction rate
of the imine with the target.9d
Compound 4. A mixture of 3 (2.64 g, 12.6 mmol), N-hydroxysuccinimide (2.17 g,
18.9 mmol), 1-(3-dimethylaminopropyl)-3-ethylcarbodiimide hydrochloride
(EDC) (3.62 g, 18.9 mmol), and DMAP (5.0 mg, 0.04 mmol) in CH2Cl2 (40 mL) was
stirred at room temperature for 24 h. The reaction mixture was added to H2O and
extracted with CH2Cl2. Usual workup and purification by silica gel flash column
chromatography (EtOAc/hexane) afforded 4 (3.28 g, 85%). 1H NMR (400 MHz,
CDCl3):d 3.73to 3.69(m, 1H), 3.44 to3.28(m, 1H), 3.12 to3.08 (m, 1H), 2.85(s, 4H),
2.41 to 2.35 (m, 1H), 2.24 to 2.14 (m, 1H), 2.04 to 1.92 (m, 1H), 1.83 to 1.66 (m, 3H).
Compound 5. To a solution of 1,2-bis(2-aminoethoxy)ethane (2.5 mL, 17.0 mmol)
in CH2Cl2 (20 mL), a solution of dansyl chloride (467 mg, 1.73 mmol) in CH2Cl2
(20 mL) was added dropwise at 0 °C. After stirring at roomtemperature for 1 h, the
mixture was acidified with 1 N HCl and washed with CH2Cl2. The aqueous layer
was basified (pH 9) with 3 N NaOH and extracted with CH2Cl2. Organic layers were
combined, washed with brine, dried over Na2SO4, filtered, and concentrated in
vacuo to afford 5 (630 mg, 95%). 1H NMR (400 MHz, CDCl3): d 8.52 (d, J = 8.8 Hz,
1H), 8.34 (d, J = 8.8 Hz, 1H), 8.23 (dd, J = 7.2 Hz, 1.2 Hz, 1H), 7.56 to 7.48 (m, 2H),
7.17 (d, J = 7.6 Hz, 1H), 3.50 to 3.46 (m, 4H), 3.41 to 3.39 (m, 4H), 3.11 to 3.09 (m,
4H), 2.87 (s, 6H).
In these reactions, excess of compound 8 was used compared to
protein (5 mM vs 475 lM). After protein was separated by gel fil-
tration or C18 column, compound 8 was recovered by extraction
with organic solvent (such as CH2Cl2). This recoverable feature of
the imine should be beneficial when a toxic drug or an expensive
molecule is covalently attached to protein.
In summary, we have synthesized a fluorescent conjugate of cyc-
lic imines that we have recently developed for covalent reactions
with phenols, including accessible tyrosine. We have demonstrated
that the imine derivative can be used to fluorescently label proteins,
although the reaction of the imine was relatively slow. The imine
derivative was stable in aqueous solutions and recoverable after
reactions. Reactions of the imine derivative proceeded without the
need of additional catalysts. This system does not require formalde-
hyde or multistep conversions after the first reaction step on tyro-
sine and thus is an improvement over previously reported labeling
systems. Furtherstudiesandimprovementsontheiminederivatives
described here are under investigation.
Compound 6. A mixture of 5 (612 mg, 1.60 mmol) and 4 (493 mg, 1.60 mmol) in
CH3CN (0.5 mL)–MeOH (1.5 mL) was stirred for 15 h at room temperature.
Solvents were evaporated in vacuo and the residue was purified by silica gel
flash column chromatography (CH2Cl2/EtOAc, 4:1) to afford 6 (322 mg, 47%). 1
H
NMR (400 MHz, CDCl3): d 8.55 (d, J = 8.8 Hz, 1H), 8.30 (d, J = 8.8 Hz, 1H), 8.24 (d,
J = 7.2 Hz, 1H), 7.57 to 7.50 (m, 2 H), 7.19 (d, J = 7.6 Hz, 1H), 6.58 (br s, 1H), 5.90 (t,
J = 5.6 Hz,1H),3.85to3.80(m,1H),3.59to3.57(m,2H),3.54to3.45(m,8H),3.37to
3.32 (m, 1H), 3.12 to 3.08 (m, 2H), 2.89 (s, 6H), 2.56 to 2.54 (m, 1H), 2.22 to 2.16 (m,
1H), 1.90 to 1.81 (m, 2H), 1.76 to 1.71 (m, 1H), 1.61 to 1.53 (m, 2H). 13C NMR
(100 MHz, CDCl3): d 174.7, 152.1, 134.0, 130.8, 129.8, 129.6, 129.3, 128.6, 123.1,
118.2, 115.2, 115.2, 63.7, 63.6, 60.1, 45.3, 43.0, 39.1, 38.5, 29.8, 26.9, 25.3, 24.6.
HRMS: calcd for C25H36N9O5S (MH+) 574.2555, found 574.2561.
Compound 7. A mixture of 6 (322 mg, 0.56 mmol) and 10% Pd/C (32 mg) in MeOH
(5 mL)–EtOAc (15 mL) was stirred under H2 for 24 h at room temperature. The
reaction mixture was filtered through Celite and concentrated in vacuo to afford 7
(290 mg, quant). 1H NMR (400 MHz, CD3OD): d 8.52 (d, J = 8.8 Hz, 1H), 8.31 (d,
J = 8.8 Hz, 1H), 8.17 (dd, J = 7.2 Hz, 1.2 Hz, 1H), 7.56 to 7.51 (m, 2H), 7.23 (d,
J = 7.6 Hz,1H),3.78to3.74(m,1H),3.46to3.36(m,2H),3.36to3.33(m,2H),3.30to
3.25 (m, 7H), 3.02 to 2.98 (m, 2H), 2.83 (s, 6H), 2.55 to 2.52 (m, 1H), 2.09 to 2.03 (m,
1H), 1.83 to 1.76 (m, 2H), 1.64 to 1.51 (m, 3H). 13C NMR (100 MHz, CDCl3): d 174.6,
151.8, 135.1, 130.3, 130.2, 129.8, 129.6, 129.1, 128.18, 128.15, 128.12, 128.0, 123.1,
118.9, 115.16, 115.14, 70.23, 70.20, 70.2, 70.1, 70.0, 69.4, 56.1, 53.4, 45.3, 42.8, 39.5,
39.2, 26.1. HRMS: calcd for C25H40N5O5S (MH+) 522.2745, found 522.2745.
Compound 8 (8a + 8b). To a solution of 7 (406 mg, 0.78 mmol) in CF3CH2OH
Acknowledgments
This study was supported by NIH Grant R21 GM078447. We
thank Prof. Peter K. Vogt for helpful technical discussions.
References and notes
(15 mL), a solution of ethyl glyoxylate polymer form (45–50% in toluene, 218 lL,
0.78 mmol) in CF3CH2OH (15 mL) was added dropwise over 24 h at room
temperature. The mixture was further stirred for 6 days. After solvents were
removed in vacuo, the residue was purified by silica gel flash column
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chromatography (CH2Cl2/EtOH, 20:1) to afford
8
(259 mg, 60%). 1H NMR
(400 MHz, CDCl3): d 8.56 to 8.53 (m, 1H), 8.31 to 8.29 (m, 1H), 8.25 to 8.22 (m,
1H), 7.72 to 7.68 (m, 1H), 7.56 to 7.50 (m, 2H), 7.19 to 7.17 (m, 1H), 6.80 to 6.39 (m,
1H), 6.30 (m, 1H), 6.28 to 6.25 (m, 1H), 3.72 to 3.40 (m, 12H), 3.13 to 3.07 (m, 2H),
2.89 (s, 6H), 2.75 to 1.30 (m, 7H). 13C NMR (100 MHz, CDCl3): d 174.5, 173.8, 157.8,
157.5, 156.49, 156.47, 151.97, 151.93, 134.8, 134.4, 130.5, 130.4, 129.8, 129.58,
129.55, 129.4, 129.3, 128.16, 128.13, 123.1, 118.8, 118.7, 115.2, 115.1, 70.4, 70.3,
70.2, 70.1, 69.3, 69.2, 62.8, 59.2, 54.0, 50.4, 45.3, 42.9, 42.8, 39.4, 39.2, 39.1, 38.1,