R. Schobert et al.
0.38 (EtOAc/cyclohexane, 1:1); 1H NMR (300 MHz, CDCl3): d=1.08
(d, J=6.9 Hz, 6H), 1.6 (m, 4H), 1.99 (s, 3H), 2.49 (t, J=7.9 Hz, 2H),
3.01 (dsept, J=6.9, 1.2 Hz, 1H), 3.66 (t, J=6.4 Hz, 2H), 6.45 (d, J=
1.2 Hz, 1H); 13C NMR (75 MHz, CDCl3): d=11.8, 21.4, 24.9, 25.8,
26.3, 26.7, 32.5, 130.0, 140.2, 144.9, 154.6, 187.3, 188.4; IR (ATR):
nmax =3378, 2961, 2935, 2873, 1709, 1647, 1612, 1459, 1378, 1308,
1246, 1060, 1025, 892, 799, 708 cmÀ1; MS (EI, 70 eV): m/z (%): 236
(100) [M+1]+, 221 (24), 203 (67), 175 (85), 147 (52), 135 (30), 105
(35), 91 (46), 53 (43), 41 (36).
concentration of 0.05% (HL-60, 518A2, HF) or 0.1% (HT-29, KB-
V1VBL, MCF-7TOPO). After 2 h the precipitate of formazan crystals was
re-dissolved in a 10% solution of sodium dodecylsulfate in DMSO
(containing 0.6% acetic acid in the case of the HL-60 cells). For
adherent cells (518A2, HT-29, KB-V1VBL and MCF-7TOPO), microplates
were swiftly turned to discard the medium before adding the sol-
vent mixture. The microplates were gently shaken in the dark for
30 min, and absorbance at 570 and 630 nm (background) was
measured with an ELISA plate reader. All experiments were carried
out in quadruplicate and the percentage of viable cells was calcu-
lated as the mean ÆSD relative to the controls (100%).
Visualisation via click reaction: PtK2 cells were grown in DMEM
medium (750 mL) in 4-well plates (Nunc) on glass coverslips and in-
cubated overnight with the alkyne 3 (5 mm). The medium was re-
moved and the cells were washed twice with phosphate buffered
saline. The cells were then fixed with 3.7% formalin (15 min), per-
meabilised with 0.1% triton X-100 (5 min) and incubated (30 min,
RT) with 5 mm 3-azido-7-hydroxycoumarine 7 in Click-iT Cell Re-
action Buffer (Molecular Probes, OR, USA) according to the manu-
facturer’s procedure. For staining of the Golgi apparatus the cells
were incubated with a primary mouse anti-Golgi mAb (1:100,
Sigma) for 1 h, then with a secondary Alexa Fluor 594 goat anti-
mouse IgG Ab (1:500, Molecular Probes) for 45 min, and finally
mounted in ProLong Antifade Gold (Molecular Probes) that con-
tained DAPI (1 mgmLÀ1) for staining the nuclei.
N-[4-(5-isopropyl-2-methyl-3,6-dioxocyclohexa-1,4-dienyl)butyl]biotina-
mide (4): A mixture of biotin (52 mg, 0.21 mmol), HOBt (10 mg,
0.06 mmol), dry DMF (20 mL) and DCC (50 mg, 0.23 mmol) was
stirred at room temperature for 3 h, then treated with amine 6
(50 mg, 0.21 mmol) and catalytic quantities of DMAP. Stirring was
continued overnight, then volatile solvents were removed under
vacuum, and the residue thus obtained was purified by CC
(CH2Cl2/MeOH, 12:1). Yield: 40 mg (41%); yellow oil; Rf =0.31
(CH2Cl2/MeOH, 12:1); 1H NMR (300 MHz, CDCl3): d=0.85 (m, 2H),
1.09 (d, J=6.9 Hz, 6H), 1.1–1.7 (m, 8H), 2.00 (s, 3H), 2.02 (m, 2H),
2.2–2.4 (m, 4H), 2.91 (m, 1H), 3.13 (dsept, J=6.9, 1.2 Hz, 1H), 4.07
(t, J=6.4 Hz, 2H), 4.32 (m, 2H), 6.46 (d, J=1.2 Hz, 1H); 13C NMR
(75 MHz, CDCl3): d=11.8, 21.4, 24.9, 25.6, 26.7, 27.9, 28.2, 28.8,
30.9, 32.5, 33.9, 40.5, 55.3, 60.1, 61.7, 130.0, 137.6, 144.7, 154.6,
163.4, 172.4, 187.0, 188.3; IR (ATR): nmax =3326, 2927, 2851, 2111,
1719, 1629, 1571, 1511, 1448, 1344, 1310, 1185, 1045, 891,
759 cmÀ1; MS (EI, 70 eV): m/z (%): 464 (43) [M]+, 227 (100), 218 (47),
166 (17), 97 (38).
Visualisation by the biotin–streptavidin system: PtK2 cells were
grown in DMEM medium (750 mL) in 4-well plates (Nunc) on glass
coverslips, and incubated with the biotin-labelled thymoquinone 4
(6.5 mm) for 24 h. Cells were fixed with 3.7% formalin for 15 min,
permeabilised with 0.1% Triton X-100 for 5 min. They were then
incubated with the streptavidin–Alexa Fluor 488 conjugate
(10 mgmLÀ1, Invitrogen), and mounted in ProLong Antifade Gold
(Molecular Probes) that included DAPI (1 mgmLÀ1) to stain the
nuclei.
Methods
Cell lines and culture conditions: Human HL-60 leukaemia cells were
obtained from the German Collection of Biological Material
(DSMZ), Braunschweig; human melanoma cells 518A2 from the De-
partment of Oncology and Hematology at Martin Luther University,
Halle; KB-V1VBL and MCF-7TOPO cells from the Institute of Pharmacy
at the University Regensburg; and the HT-29 colon carcinoma cells
and human foreskin fibroblasts (HF) from the University Hospital,
Erlangen. HL-60 and HT-29 cells were grown in RPMI-1640 medium
supplemented with 10% foetal calf serum (FCS), penicillin G
Acknowledgements
(100 UmLÀ1),
streptomycin
(100 mgmLÀ1),
amphotericin B
We are grateful to the Deutsche Forschungsgemeinschaft for
financial support (grant Scho 402/8–3).
(0.25 mgmLÀ1) and gentamycin (250 mgmLÀ1; Gibco, Egenstein, Ger-
many). 518A2, HF and KB-V1VBL cells were cultured in Dulbecco’s
modified Eagle medium (DMEM, Gibco) containing 10% FCS, peni-
cillin G (100 IUmLÀ1), streptomycin (100 mgmLÀ1), amphotericin B
(0.25 mgmLÀ1) and gentamycin (250 mgmLÀ1). MCF-7TOPO cells were
grown in Eagle’s minimum essential medium (EMEM, Sigma) sup-
Keywords: alkynes · biotin · click chemistry · fluorescent
probes · thymoquinone
plemented with NaHCO3 (2.2 gLÀ1), sodium pyruvate (110 mgLÀ1
)
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turated 5% CO2 atmosphere at 378C in 75 mL culture flasks (Nunc,
Wiesbaden, Germany). They were serially passaged following pro-
tease treatment with 0.05% trypsin/0.02% EDTA (PAA laboratories,
Cçlbe, Germany) or by using cell scrapers. Mycoplasma contamina-
tion was routinely monitored; only mycoplasma-free cultures were
used.
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Determination of tumour cell growth (MTT assay): HL-60 cells (5ꢂ
105 mLÀ1), 518A2, HT-29, KB-V1VBL and MCF-7TOPO cells (5ꢂ104 mLÀ1
each) and HF fibroblasts were seeded in 96-well tissue culture
plates and cultured for 24 h. Incubation (5% CO2, 95% humidity,
378C) of the cells following treatment with the test compounds
was continued for 72 h. Blank and solvent controls were treated
identically. MTT in phosphate buffered saline was added to a final
1240
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ChemBioChem 2011, 12, 1237 – 1241