Journal of Medicinal Chemistry
Article
134.15, 137.17, 137.67, 166.15, 172.50 and 174.35; mass spectrum
(ESI), m/z 493.2697 (M + H)+ (C29H37N2O5 requires m/z 493.2697).
6-((1R,2R,3S,5S)-3-(Benzoyloxy)-8-methyl-8-azabicyclo-
[3.2.1]octane-2-carboxamido)hexanoic Acid (3). A mixture of
23.0 mg (0.05 mmol) of 2 and 15 mg of 10% Pd/C in 1 mL of ethanol
was stirred overnight under a H2 atm at room temperature. The
catalyst was removed by filtration, and the crude products were
purified on a VYDAC C18 reversed phase semipreparative (250 mm ×
22 mm, 10−15 μm) HPLC column using water and 0.1% TFA in
CH3CN mobile phases. A linear gradient was employed (90:10 H2O/
0.1%TFA in CH3CN → 10:90 H2O/0.1%TFA in CH3CN) over a
period of 40 min at a flow rate of 10 mL/min. Fractions containing the
desired product were collected, frozen, and lyophilized to give 3 as
132.12, 132.21, 132.29, 132.77, 132.84, 136.65, 136.70, 170.71 and
170.91; mass spectrum (MALDI-TOF), m/z 430.5 (M + H)+
(theoretical 430.2).
(1R,2R,3S,5S)-Methyl 3-(((benzyloxy)(phenyl)phosphoryl)-
oxy)-8-azabicyclo[3.2.1]octane-2-carboxylate (8). To a solution
of 46.6 mg (0.11 mmol) of amide 7 in 1 mL of benzene was added
134.4 μL (0.98 mmol) of Troc-Cl and 4.5 mg (0.033 mmol) of
K2CO3. After being refluxed at 80 °C overnight, the reaction mixture
was quenched with saturated NH4Cl aqueous solution and then
extracted with EtOAc. The combined organic layer was washed with
brine, dried (MgSO4), and concentrated under diminished pressure.
The filtrate was concentrated under diminished pressure. The
remaining residue was placed under high vacuum for 2 h, followed
by the addition of 2 mL of DMF, 11.1 mg (0.17 mmol) of Zn dust,
and 2.1 μL (0.056 mmol) of formic acid. The resulted mixture was
stirred at room temperature overnight. The reaction mixture was
quenched with saturated NH4Cl aqueous solution and then extracted
with EtOAc. The combined organic layer was washed with brine, dried
(MgSO4), and concentrated under diminished pressure to give the
product 8, which was used for the next step promptly without any
purification or characterization.
TFA salt: yield 11.2 mg (60%); [α]2D5 −21.08° (c 0.65, MeOH). H
1
NMR (CD3OD) δ 1.12−1.21 (m, 2H), 1.27−1.36 (m, 3H), 1.37−1.46
(m, 2H), 2.12 (t, 2H, J = 6.0 Hz), 2.15−2.24 (m, 2H), 2.33−2.37 (m,
1H), 2.33−2.37 (m, 1H), 2.47−2.52 (m, 2H), 2.58 (td, 1H, J = 12.0,
6.0 Hz), 2.84 (s, 3H), 3.04−3.10 (m, 1H), 3.21−3.26 (m, 2H), 4.00−
4.01 (m, 1H), 4.15 (d, 1H, J = 6.0 Hz), 5.52−5.56 (m, 1H), 7.49 (t,
2H, J = 6.0 Hz), 7.63 (t, 1H, J = 6.0 Hz), 7.98 (d, 2H, J = 6.0 Hz) and
8.43 (br, 1H). 13C NMR (CD3OD) δ 23.71, 24.26, 24.94, 26.80, 29.37,
33.68, 34.02, 38.14, 39.91, 46.64, 63.70, 65.00, 65.87, 129.20, 130.02,
130.12, 134.36, 166.02, 172.39 and 176.73; mass spectrum (ESI), m/z
403.2222 (M + H)+ (C22H31N2O5 requires m/z 403.2227).
4-((1R,2R,3S,5S)-3-(((Benzyloxy)(phenyl)phosphoryl)oxy)-2-
(methoxycarbonyl)-8-azabicyclo[3.2.1]octan-8-yl)-4-oxobuta-
noic Acid (9). To a solution of 50.9 mg (0.12 mmol) of amine 8 in 2
mL of DMF was added 34.2 μL (0.25 mmol) of Et3N and 24.5 mg
(0.25 mmol) of succinic anhydride. The reaction mixture was then
heated to 45 °C and stirred for 16 h. The reaction mixture diluted with
5 mL of H2O and extracted with three 10 mL portions of EtOAc. The
combined organic layer was washed with brine, dried (MgSO4), and
concentrated under diminished pressure. The crude products were
purified on a VYDAC C18 reversed phase semipreparative (250 mm ×
22 mm, 10−15 μm) HPLC column using water and 0.1% TFA in
CH3CN mobile phases. A linear gradient was employed (90:10 H2O/
0.1%TFA in CH3CN → 10:90 H2O/0.1%TFA in CH3CN) over a
period of 40 min at a flow rate of 10 mL/min. Fractions containing the
desired product were collected, frozen, and lyophilized to give 9 as
Benzyl 6-Aminohexanoate (4). To a solution of 0.5 g (2.16
mmol) of Boc-6-aminohexanoic acid in 15 mL of DCM was added 497
mg (2.29 mmol) of EDC followed by 269 μL (2.59 mmol) of benzyl
alcohol and 26.4 mg (0.22 mmol) of DMAP at 0 °C. The reaction
mixture was slowly warmed to room temperature and stirred for
another 16 h. The reaction mixture was quenched by the addition of
10 mL of satd aq NH4Cl. The mixture was extracted with EtOAc. The
combined organic layer was washed with brine, dried (MgSO4), and
concentrated under diminished pressure. The residue was purified by
flash chromatography on a silica gel column (25 cm × 3.2 cm). Elution
with 10:1 hexanes/ethyl acetate gave the product as a yellow oil: yield
1
0.64 g (92%); silica gel TLC Rf 0.25 (8:2 hexanes/ethyl acetate). H
1
TFA salt: yield 39.8 mg (63%). H NMR (CD3OD) δ 1.55−1.74 (m,
NMR (CDCl3) δ 1.45−1.49 (m, 2H), 1.58 (s, 9H), 1.60−1.64 (m,
1H), 1.76−1.84 (m, 3H), 2.50 (t, 2H, J = 8.0 Hz), 3.21−3.25 (m, 2H),
4.63 (br, 1H), 5.25 (s, 2H) and 7.44−7.53 (m, 5H). To 0.64 g (1.99
mmol) of the obtained benzylated product in 10 mL of DCM at 0 °C
was added 5 mL of TFA. The reaction was stirred at 0 °C for 2 h
before the solvent was removed under diminished pressure to give 4 as
light-yellow oil: yield 408 mg (85% over two steps). 1H NMR
(CDCl3) δ 1.49−1.52 (m, 2H), 1.75−1.82 (m, 4H), 2.49 (t, 2H, J =
7.2 Hz), 3.06−3.11 (m, 2H), 5.24 (s, 2H), 7.41−7.90 (m, 5H) and
7.92 (br, 2H). 13C NMR (CDCl3) δ 24.34, 25.88, 27.28, 34.08, 40.15,
66.79, 128.46, 128.66, 128.94, 136.12 and 174.15; mass spectrum
(ESI), m/z 222.1492 (M + H)+ (C13H19NO2 requires m/z 222.1488).
(1R,2R,3S,5S)-Methyl 3-(((benzyloxy)(phenyl)phosphoryl)-
oxy)-8-methyl-8-azabicyclo[3.2.1]octane-2-carboxylate (7). To
a solution of 39.0 mg (0.20 mmol) of 5 in 1 mL of THF was added
120 μL of LDA (0.22 mmol, 1.8 M in cyclohexane) of LDA followed
by 52.2 mg (0.23 mmol) of 6 at 0 °C. The reaction mixture was slowly
warmed to room temperature and stirred for another 16 h. The
reaction mixture was concentrated under diminished pressure and
purified by flash chromatography on a silica gel column (25 cm × 3.2
cm). Elution with 40:1 chloroform/MeOH gave the product 7 as a
yellow oil: yield 51.5 mg (60%); silica gel TLC Rf 0.5 (9:1 chloroform/
2H), 1.77−2.05 (m, 2H), 2.11−2.38 (m, 1H), 2.45−2.75 (m, 4H),
2.95−3.12 (m, 1H), 3.49 (s, 1H), 3.53 (s, 0.5H), 3.57 (2, 1H), 3.64 (s,
0.5H), 4.41−4.45 (m, 0.6H), 4.55−4.60 (m, 0.4H), 4.65−4.70 (m,
0.4H), 4.86−4.86 (m, 2H), 4.97−5.13 (m, 2.6H), 7.32−7.37 (m, 5H),
7.49−7.52 (m, 2H), 7.60−7.63 (m, 1H), and 7.68−7.75 (m, 2H). The
product was shown to exist as a mixture of amide rotamers of benzyl
ester diastereomers, and the ratio of two rotamers was estimated to be
approximately 2:3. 13C NMR (CD3OD) δ 26.52, 26.94, 26.95, 28.38,
28.53, 28.60, 28.62, 28.81, 51.47, 51.51, 51.75, 51.84, 51.88, 51.91,
53.86, 53.88, 54.27, 54.32, 56.32, 68.74, 68.76, 68.87, 70.26, 70.30,
70.33, 70.37, 70.30, 128.66, 128.70, 129.20, 129.29, 129.39, 131.96,
132.03, 132.04, 132.07, 132.12, 133.76, 136.86, 169.71, 170.79, 170.89,
170.94, 171.01, 175.65 and 175.70; mass spectrum (ESI), m/z
516.1773 (M + H)+ (C26H31NO8P requires 516.1782).
4-((1R,2R,3S,5S)-3-((Hydroxy(phenyl)phosphoryl)oxy)-2-
(methoxycarbonyl)-8-azabicyclo[3.2.1]octan-8-yl)-4-oxobuta-
noic Acid (10). A mixture of 11.2 mg (0.02 mmol) of 9 and 5 mg of
10% Pd/C in 1 mL of ethanol was stirred overnight under a H2 atm at
room temperature. The catalyst was removed by filtration, and the
crude products were purified on a VYDAC C18 reversed phase
semipreparative (250 mm × 22 mm, 10−15 μm) HPLC column using
water and 0.1% TFA in CH3CN mobile phases. A linear gradient was
employed (90:10 H2O/0.1%TFA in CH3CN → 10:90 H2O/0.1%TFA
in CH3CN) over a period of 40 min at a flow rate of 10 mL/min.
Fractions containing the desired product were collected, frozen, and
lyophilized to give 10 as TFA salt: yield 7.8 mg (85%); [α]2D5 −12.78°
1
MeOH). H NMR (CD3OD) δ 1.48−1.54 (m, 2H), 1.65−1.69 (m,
0.4H), 1.82−1.86 (m, 0.6H), 1.98−2.05 (m, 0.6H), 2.15 (s, 3H), 2.36
(td, J = 12, 6 Hz, 0.4H), 2.49 (td, J = 12, 6 Hz, 0.6H), 2.77−2.79 (t, J =
6 Hz, 0.6H), 2.95−2.97 (t, J = 6 Hz, 0.4H), 3.14−3.16 (m, 0.4H),
2.96−3.06 (m, 1H), 3.19−3.21 (m, 0.6H), 3.38−3.40 (m, 0.6H),
3.44−3.64 (m, 0.4H), 3.58 (s, 1.8H), 3.67 (s, 1.2H), 4.61−4.69 (m,
1H), 4.92−5.10 (m, 2H), 7.28−7.35 (m, 5H), 7.39−7.45 (m, 2H),
7.51−7.54 (m, 1H) and 7.74−7.84 (m, 2H). The product was shown
to exist as a mixture of benzyl ester diastereomers. 13C NMR
(CD3OD) δ 25.45, 25.74, 30.12, 37.84, 41.41, 51.71, 51.79, 50.02,
52.05, 52.28, 61.87, 61.97, 65.17, 65.17, 65.21, 67.78, 67.82, 70.00,
70.04, 128.21, 128.65, 128.69, 128.73, 128.81, 128.85, 128.89, 132.04,
1
(c 1.15, MeOH). H NMR (CD3OD) δ 1.66−2.34 (m, 6H), 2.45−
2.76 (m, 4H), 2.96−3.06 (m, 1H), 3.34 (s, 1.2H), 3.56 (s, 1.8H),
3.63−3.65 (m, 1H), 4.44−4.46 (m, 0.6H), 4.57−4.59 (m, 0.4H),
4.67−4.69 (m, 0.4H), 4.80−4.81 (m, 1.6H), 7.47−7.50 (m, 2H),
7.56−7.59 (m, 1H) and 7.72−7.76 (m, 2H). The product was shown
to exist as a mixture of amide rotamers of benzyl ester diastereomers,
and the ratio of two rotamers was estimated to be approximately 2:3.
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dx.doi.org/10.1021/jm400228w | J. Med. Chem. 2013, 56, 3701−3709