C. Sanfilippo, et al.
BioorganicChemistry93(2019)103325
electron multiplier voltage and 180 °C ion source temperature. Mass
spectra data were acquired in the scan mode in m/z range of 40–400.
Chiral HPLC analyses were carried out on a Dionex instrument
equipped with a Ultimate 3000 high-pressure binary pump, an ASI-100
autosampler, a TCC-100 thermostated column compartment and a
UVD-100 multiple wavelength detector set at 210, 220, 230 and
250 nm. The Chromeleon software (version 6.7) was used for instru-
ment control, data acquisition and data handling.
2.4. Biocatalyzed synthesis of 15S-hydroxy-(5Z,8Z,11Z,13E,17Z)-
eicosapentaenoic acid, 1
To a solution of EPA (100 mg, 0.33 mmol) in 50 mM borate buffer at
pH 9.0 (20 mL) soybean lyophilized enzyme preparation (200 mg) and
sodium borohydride (25 mg, 0.66 mmol) were added. The reaction
mixture was stirred at room temperature under a flow of air (100 mL/
min) until complete disappearance of the substrate (1 h) and then taken
to pH 3 by addition of dil. HCl. The resulting suspension was filtered
through a Celite pad and the clear filtrate was discarded. The Celite pad
was suspended in 60 mL of EtOAc and stirred for 15 min. After filtra-
tion, the organic phase was dried with Na2SO4 and the solvent evapo-
rated under vacuum to give an oily residue (130 mg) which was pur-
ified by column chromatography (Si gel 3.0 g, from n-hexane: HCOOH
99:1 to n-hexane:AcOEt:HCOOH 93:6:1, 150 mL) to give pure 1 (74 mg,
70% yield). [α]D = + 4.4 (c 0.88, MeOH), lit. [47] [α]D = + 4.9 (c
0.11, MeOH). 1H NMR: δ 0.97 (t, 3H, J = 7.6, H-20), 1.71 (br q, 2H, H-
3), 2.09 (m, 2H, H-19), 2.14 (br q, 2H, H-4), 2.38–2.35 (m, 4H, H-2 and
H-16), 2.82 (m, H-7), 2.98 (m, 2H, H-10), 4.28 (br q, 1H, H-15),
5.32–5.48 (m, 6H, H-5, H-6, H-8, H-9, H-11, H-17), 5.57 (m, 1H, H-18),
5.73 (dd, 1H, J = 5.6 and 15.2, H-14), 6.00 (t, 1H, J = 10.8, H-12),
6.60 (dd, 1H, J = 11.2 and 15.2, H-13). 13C NMR: δ 14.2 (C-20), 20.7
(C-19), 24.4 (C-3), 25.7 (C-7), 26.2 (C-10), 26.4 (C-4), 33.0 (C-2), 35.2
(C-16), 72.0 (C-15), 123.5 (CH = ), 125.4 (C-13), 127.4 (CH = ), 127.8
(C-12), 128.6 (CH = ), 128.8 (CH = ), 128.9 (CH = ), 130.3 (CH = ),
135.2 (C-14), 135.4 (C-18), 178.1 (C-1). HR-ESI-MS: 317.21230 [M –
TLC analyses were performed on aluminum plates coated with silica
gel and flourescent indicator F254, revealing the compounds by UV and
cerium sulfate.
Column chromatography was performed on silica gel 60 (Merck,
40–63 μm) or Lichroprep Si 60 (Merck, 25–40 μm) using the specified
eluents. 1H- and 13C NMR spectra were recorded on Bruker Avance™
400 spectrometer at 400.13 and 100.62 MHz, respectively. Chemical
shifts (δ) are given as ppm relative to the residual solvent peak and
coupling constants (J) are in Hz. 2D-experiments were carried out using
an inverse multinuclear probe with pulse-field Z-gradient and standard
Bruker pulse sequence programs. Optical rotations were measured on
Jasco DIP-135 polarimeter using a 10 cm length cell.
2.2. Preparation of EPA acid
To a solution of the ethyl ester of EPA (200 mg, 0.6 mmol) in 1.7 mL
of dioxane, 300 µL of distilled water and Novozym 435 (200 mg) were
added. The mixture was stirred at 55 °C and 280 rpm in a shaker for 3 h.
Then, the enzyme was separated by filtration and the solution taken to
dryness under reduced pressure. The residue was purified by column
chromatography (Si gel 3.9 g, from n-hexane to n-hexane/EtOAc 9:1
containing 0.1% of HCOOH, 200 mL) to give pure (TLC analysis) EPA
(180 mg, 0.59 mmol, 98% yield) as a colorless oil.
–
H]–; theor. for C20H29O3 317.21112
2.5. Synthesis of compound 3
According to
a reported procedure [48] compound 1 (30 mg,
0.094 mmol) was converted into the corresponding methyl ester by re-
action with dimethylcarbonate (0.5 mL) in the presence of Novozym 435
lipase (30 mg). The reaction mixture was stirred (280 rpm) in a shaker at
55 °C until complete conversion of the substrate was reached (5 h), then
quenched by filtration of the enzyme. The solution was taken to dryness
under vacuum and the residue was purified by column chromatography
(Si gel, from n-hexane to n-hexane:EtOAc to 9:1) to afford ester 2 (29 mg,
2.3. Test for lipoxygenase activity
Air-dried soybean seeds from organic crops were finely grounded
with a domestic blender and the obtained flour was sifted on a tea sieve.
Defatted flour was prepared by suspending the powder (5 g) in acetone
(10 mL) and stirring the mixture for 10 min at room temperature. The
suspension was then centrifuged at 2930 g and the solution discarded.
The procedure was then repeated another two times and the final solid
was dried overnight in a fume hood to give 4.4 g of defatted flour.
Defatted soybean flour (1 g) was suspended in 20 mL of distilled
water and stirred under magnetic agitation at room temperature for 5,
15 or 30 min. The suspension was then centrifuged at 11,000 g for
20 min at 4 °C and the obtained supernatant was used as “soybean ex-
tract” sample. The same procedure was also applied to untreated soy-
bean flour, which was extracted for 30 min to give the “not defatted”
sample.
0.09 mmol, 96% yield) as
a colorless oil. Compound 2 (10 mg,
0.031 mmol) was dissolved in CH2Cl2 (0.8 mL) and to this solution N,N'-
dicyclohexylcarbodiimmide (DCC, 0.3 mmol), dimethylaminopyridine
(DMAP, 0.15 mmol) and (R)-(–)-methoxyphenylacetic acid (MPA,
0.15 mmol) were added. The mixture was left at room temperature under
stirring for 18 h. After evaporation of the solvent, the residue was purified
by column chromatography (Si gel 1.5 g, from n-hexane to n-hex-
ane:EtOAc 9:1 v/v, 80 mL) to give 12 mg (0.025 mmol, 82% yield) of
diester 3 as a colorless oil. 1H NMR: δ 0.89 (t, 3H, J = 7.6, H-20), 1.72 (m,
2H, H-3), 1.92 (m, 2H, H-19) 2.12 (m, 2H, H-4), 2.25–2.35 (m, 4H, H-2
and H-16), 2.81 (br t, H-7), 2.92 (br t, 2H, H-10), 3.42 (s, 3H, -OMe), 3.67
(s, 3H, -COOMe), 4.76 (s, 1H, -CHOMe), 5.05 (m, 1H, H-17) 5.35–5.46
(m, 7H, H-5, H-6, H-8, H-9, H-11, H-15, H-18), 5.62 (dd, 1H, J = 7.2 and
15.2, H-14), 5.95 (t, 1H, J = 10.8, H-12), 6.52 (dd, 1H, J = 11.2 and
15.2, H-13), 7.35 (m, 3H, Ph), 7.44 (br d, 2H, Ph). 13C NMR: δ 14.0 (C-
20), 20.6 (C-19), 24.8 (C-3), 25.6 (C-7), 26.1 (C-10), 26.5 (C-4), 32.1 (C-
2), 33.4 (C-16), 51.5 (–COOCH3), 57.3 (–OCH3), 75.0 (C-15), 82.7
(-CHOMe), 122.4 (C-17), 127.2 (2 × Ar-C), 127.4 (CH = ), 127.7 (C-12),
128.0 (C-13), 128.5 (2 × Ar-C), 128.6 (CH = ), 128.8 (CH = ), 129.1
(CH = ), 130.5 (C-14), 131.5 (CH = ), 134.7 (C-14), 136.3 (C-1 Ar),
170.0 (MPA-CO), 174.0 (C-1).
Freeze-dried preparation of lipoxygenase was obtained as follows:
soybean flour (10 g) was suspended in 100 mL of distilled water and
stirred under magnetic agitation at room temperature for 30 min at
1250 rpm. The suspension was then centrifuged at 11,000 g for 20 min
at 4 °C and the supernatant frozen at – 4 °C. The frozen supernatant was
freeze-dried to give 2.5 g of lyophilized enzyme preparation as a pale
yellow powder. For the test of enzymatic activity 250 mg of powder
were dissolved in 20 mL of H2O.
The assay of lipoxygenase activity was carried out according to Suda
et al. [46] by mixing 200 µL of 10 mM sodium linoleate, 200 µL of
100 µM methylene blue, 1 mL of 50 mM borate buffer pH 9.0 and dis-
tilled water to a final volume of 2 mL. To this solution, kept under
magnetic agitation, LOX-1 solution (2 mg/mL, 70 μL), soybean fresh
extract (50 mg/mL, 20 µL) or solution of freeze-dried extract (100 μL,
12.5 mg/mL) was added and the absorbance at λ 660 nm was mon-
itored over 10 min.
2.6. Test for peroxygenase activity
Commercial whole seeds (60 g) of air-dried oat (Avena sativa) from
organic crops were ground by an electric coffee mill and the obtained
3