SAR of New Analogues of 15-Deoxyspergualin
J ournal of Medicinal Chemistry, 1999, Vol. 42, No. 2 285
to a stirred solution of methyl [(phenoxycarbonyl) oxy] acetate
(4.5 g, 21.4 mmol) in toluene (100 mL). The reaction medium
was refluxed for 15 h. The solvent was evaporated off under
reduced pressure, and the obtained residue was purified by
flash chromatography on silica gel (methylcyclohexane/EtOAc
7/3 and then EtOAc) to afford 24a (8.4 g, 85%) as an oil. 1H
NMR (CDCl3) δ: 1.45-1.65 (m, 24H), 3.05-3.25 (m, 8H), 3.8
(s, 3H), 4.7 (s, 2H), 4.9 and 5.3 (br s, 1H).
13 mmol) in anhydrous THF (50 mL) was added dropwise.
Stirring was continued for 24 h at room temperature, and the
solvent was evaporated off under reduced pressure. The
obtained residue was purified by flash chromatography on
silica gel (EtOAc) to afford 18a (6.01 g, 64% yield) as an oil.
1H NMR (CDCl3) δ: 1.3-1.7 (m, 50H), 3.1-3.35 (m, 12H), 3.8
(d, 2H), 4.8 and 5.8 (br s, 3H), 6.9 (t, 1H), 8.3 (t, 1H); 11.5 (s,
1H).
6[(1,1-Dim eth yleth oxy)ca r bon yl]-13-oxa -12-oxo-2,6,11-
tr ia za p en ta d eca n ed ioic Acid , 1-(1,1-Dim eth yleth yl Es-
ter ) (25a ). This compound was obtained (6.7 g, 81% yield) as
an oil by following a procedure analogous to preparation of
4a and starting from 24a (8.45 g, 18.3 mmol). 1H NMR (CDCl3)
δ: 1.3-1.8 (m, 24H), 3.10-3.25 (m, 8H), 4.7 (s, 2H), 5.0 (t, 1H),
6.8 (s, 1H).
3-[[(1,1-Dim et h ylet h oxy)ca r b on yl]a m in o]-21-[(1,1-d i-
m eth yleth oxy)ca r bon yl]-14-oxa -12,15-d ioxo 2,4,11,16,21,-
25-h exa a za h exa cos-2-en ed ioic Acid , Bis(1,1-d im eth yl-
eth yl) Ester (26a ). This compound was obtained (3.85 g, 73%
yield) in the form of an oil by following a procedure analogous
to preparation of 12a and starting from 25a (3.0 g, 6.7 mmol)
and 2 (2.4 g, 6.7 mmol). 1H NMR (CDCl3) δ: 1.35-1.65 (m,
50H), 3.10-3.30 (m, 12H), 4.55 (s, 2H), 5.2-5.5 (br s, 1H), 6.4
(br s, 1H).
4-[3-(Am in op r op yl)a m in o]bu t ylca r b a m ic Acid , 2-[[6-
[(am in oim in om eth yl)am in o]-h exyl]am in o]-2-oxoeth yl Es-
ter , Tr is(tr iflu or oa ceta te) (27a ). This compound was ob-
tained as a translucent white amorphous solid (2.61 g, 73%
yield) according to the procedure described for 13a and starting
from 26a (3.85 g, 4.9 mmol). 1H NMR (DMSO-d6) δ: 1.25-1.55
(m, 12H), 1.9 (m, 2H), 2.80-3.10 (m, 12H), 4.35 (s, 2H), 5.5-
8.6 (m, 12H). 13C NMR (D2O) δ: 23.6, 24.5, 26.2, 26.3, 26.7,
28.6, 29.0, 37.3, 39.8, 40.6, 41.9, 45.2, 48.2, 63.7, 157.5, 158.2,
171.4.
N-[4-[[3-(Am in o)p r op yl]a m in o]bu tyl]-N′-[[[[6-[(a m in o-
im in om e t h yl)a m in o]h e xyl]a m in o]ca r b on yl]m e t h yl]-
u r ea , Tr is(tr iflu or oa ceta te) (19a ). This compound was
obtained as an oil (4.75 g, 86% yield) according to the procedure
described for 13a and starting from 18a (6 g, 7.3 mmol). 1H
NMR (DMSO-d6) δ: 1.2-1.65 (m, 12H), 1.9 (m, 2H), 2.9-3.15
(m, 12H), 3.6 (d, 2H), 6.1 (t, 1H), 6.3 (t, 1H), 6.8-9 (m, 11H).
13C NMR (DMSO-d6) δ: 22.8, 23.7, 25.6, 25.8, 27.0, 28.3, 28.9,
36.1, 38.3, 38.5, 40.5, 42.7, 43.7, 46.5, 156.7, 157.9, 169.6.
P r epar ation of Com pou n d 21a. 3-[(1,1-Dim eth yleth oxy)-
ca r bon yla m in o]-20-[(1,1-d im eth yleth oxy)ca r bon yl]-12,-
15-dioxo-2,4,11,14,20,24-h exaaza pen tacos-2-en edioic Acid,
Bis(1,1-d im eth yleth yl) Ester (20a ). A solution of isobutyl
chloroformate (0.97 g, 7.1 mmol) in THF (5 mL) was added
dropwise to a solution cooled to -30 °C of 11a (2.7 g, 7.1 mmol)
and N-methylmorpholine (0.72 g, 7.1 mmol) in THF (40 mL).
The reaction medium was stirred for 0.5 h and a solution of
17a (2.9 g, 7.1 mmol) in THF (30 mL) was added. Stirring was
maintained for 2 h at - 30 °C and then for 24 h at room
temperature. After filtration of the reaction mixture and
evaporation of the filtrate under vacuum, the residue obtained
was purified by flash chromatography on silica gel (EtOAc) to
afford 20a as an oil (1.9 g, 34% yield). 1H NMR (CDCl3) δ: 1.1-
1.6 (m, 50H), 2.1-2.2 (t, 2H), 2.8-2.9 (q, 2H), 3.0-3.1 (m, 6H),
3.2-3.3 (q, 2H), 3.6 (d, 2H), 6.7-6.9 (bs, 1 H), 7.7 (t, 1H), 8.0
(t, 1H), 8.3 (t, 1H), 11.5 (s, 1H).
5-[(3-Am in op r op yl)a m in o]-N-[2-[6-[(a m in oim in om eth -
yl)am in o]h exylam in o]-2-oxoeth yl]pen tan am ide (21a). This
compound was obtained as an oil (0.7 g, 90%) according to the
procedure described for 13a and starting from 20a (0.84 g, 1.1
Gen er a l P r oced u r e for th e P r ep a r a tion of Com p ou n d s
19a -c, 21a -b, a n d 23. Compounds of the general structure
19a -c, 21a -b, and 23 were synthesized according to the
Scheme 4 by the representative procedures illustrated for
analogues 19a , 21a , and 23.
1
mmol). H NMR (DMSO-d6) δ: 1.2-1.7 (m, 12H), 1.8-1.9 (m,
2H), 2.2 (t, 2H), 2.8-3.2 (m, 10H), 3.6 (d, 2H), 7.7 (t, 1H), 7.8-
8.0 (m, 4H), 8.1 (t, 1H), 8.5-8.7 (m, 3H). 13C NMR (D2O) δ:
22.8, 24.6, 25.8, 26.2, 26.3, 28.6, 29.0, 35.4, 37.4, 40.0, 41.9,
43.4, 45.2, 48.2, 157.5, 172.0, 177.4.
P r epar ation of Com pou n d 19a. 3-[[(1,1-Dim eth yleth ox-
y)ca r bon yl]a m in o]-12-oxo-2,4,11,14-tetr a a za p en ta d ec-2-
en ed ioic Acid , 1-(1,1-Dim eth yleth yl) Ester 15-P h en yl-
m eth yl Ester (16a ). A solution of isobutyl chloroformate (1.6
g, 14.0 mmol) in THF (5 mL) was added dropwise to a solution
cooled to -30 °C of carbobenzyloxyglycine (3.0 g, 14.0 mmol)
and N-methylmorpholine (2.8 g, 28 mmol) in THF (50 mL).
The reaction medium was stirred for 0.5 h and a solution of 2
(5.4 g, 14 mmol) in THF (20 mL) was added. Stirring was
maintained for 2 h at -30 °C and then for 24 h at room
temperature. After filtration of the reaction medium and
evaporation of the filtrate under vacuum, the residue obtained
was purified by flash chromatography on silica gel (EtOAc/
methylcyclohexane 1/1) to afford 16a as an oil (7.16 g, 91%
P r epar ation of Com pou n d 23. 3-[[(1,1-Dim eth yleth oxy)-
ca r bon yl]a m in o]-21-[(1,1-d im eth yleth oxy)ca r bon yl]-1,2,-
15-d ioxo-16-oxa -2,4,11,14,21,25-h exa a za h exa cos-2-en e-
d ioic Acid , Bis(1,1-d im eth yleth yl) Ester (22). To a stirred
solution of 8a (1.0 g, 2.89 mmol) and triethylamine (0.45 g,
4.5 mmol) in THF (20 mL) was added a solution of 4-nitro-
phenyl chloroformate (0.58 g, 2.89 mmol) in THF (5 mL). The
reaction mixture was stirred for 15 h at room temperature,
and a solution of 17a (1.2 g, 2.89 mmol) in THF (10 mL) was
then added. The reaction mixture was heated to 40 °C and
stirred for 5 h. After concentration of the reaction mixture
under reduced pressure, the residue was purified by MPLC
on silica gel (methylcyclohexane/EtOAc 7/3 and then EtOAc)
1
yield). H NMR (CDCl3) δ: 1.3-1.7 (m, 26H), 3.2 (q, 2H), 3.4
(q, 2H), 3.8 (d, 2H), 5.15 (s, 2H), 5.5 (br s, 1H), 6.0 (br s, 1H),
7.3 (s, 5H).
1
to afford 22 (1.0 g, 44% yield) as a transparent oil. H NMR
13-Am in o-3-[[(1,1-d im et h ylet h oxy)ca r b on yl]a m in o]-
12-oxo-2,4,11-tr ia za tr id ec-2-en oic Acid , 1,1-Dim eth yleth -
yl Ester (17a ). A mixture of 16a (7.1 g, 13 mmol) and 10%
palladium on carbon (0.7 g) in ethanol (120 mL) was stirred
at room temperature and under a hydrogen atmosphere for 2
h at atmospheric pressure. The catalyst was then filtered off,
and the organic phase was evaporated to give 17a (5.3 g, 98%
yield) in the form of an oily residue which was used without
further purification for the preparation of 18a . 1H NMR
(CDCl3) δ: 1.3-1.6 (m, 28H), 3.25-3.45 (m, 6H), 7.3 (s, 1H),
8.3 (t, 1H), 11.5 (s, 1H).
3-[[(1,1-Dim et h ylet h oxy)ca r b on yl]a m in o]-21-[(1,1-d i-
m et h ylet h oxy)ca r b on yl]-12,15-d ioxo-2,4,11,14,16,21,25-
h ep ta a za h exa cos-2-en ed ioic Acid , Bis(1,1-d im eth yleth -
yl) Ester (18a ). Bis(4-nitrophenyl)carbonate (4.3 g, 13 mmol)
was added in small portions to a solution of 17a (5.3 g, 12
mmol) in anhydrous THF (50 mL). The reaction medium was
stirred for 1 h at room temperature, and a solution of 9 (4.5 g,
(CDCl3) δ: 1.3-1.9 (m, 50H), 3.05-3.55 (m, 10H), 3.85 (d, 2H),
4.10 (t, 2H), 4.7-5.3 (br s, 1H), 5.4-5.6 (br s, 1H), 6.0-6.2 (br
s, 1H), 8.3-8.5 (br s, 1H), 11.5 (s, 1H).
[4-[(3-Am in op r op yl)a m in o]bu toxyca r bon yla m in o]-N-
[6-[(a m in oim in om et h yl)a m in o]h exyl]a cet a m id e, Tr is-
(tr iflu or oa ceta te) (23). This compound was obtained in the
form of a translucent white amorphous solid (0.78 g, 84% yield)
according to the procedure described for 13a and starting from
22 (1.0 g, 1.25 mmol). 1H NMR (DMSO-d6) δ: 1.2-1.55 (m,
8H), 1.6-1.75 (m, 4H), 1.8-1.95 (m, 2H), 2.8-3.1 (m, 10H),
3.55 (d, 2H), 3.95 (t, 2H), 6.7-7.4 (m, 4H), 7.5 (t, 1H), 7.75-
8.0 (m, 4H), 8.5-8.65 (m, 3H). 13C NMR (D2O) δ: 23.0, 24.5,
26.1, 26.2, 26.3, 28.5, 28.9, 31.0, 37.3, 39.9, 41.8, 45.2, 48.1,
65.7, 158.0, 159.0, 178.5.
P r oced u r e for th e P r ep a r a tion of Com p ou n d 31. 31
was synthesized from 10-[(phenylmethoxy)carbonyl amino]-
decanoic acid and 9 in four steps as follows: