anionic character of the tyrosine. In PSII, the hydrogen bonded
water is important not only in the reduction of the tyrosyl radical
as a hydrogen source but also in terms of lowering the pKa of
the tyrosine.
The hydrogen bond to a phenolate anion greatly shifts the
oxidation potential of the phenolate anion. Based on this
finding, the reaction rate of oxidation by dioxygen is remarkably
reduced. These results indicate that the phenolate anions in
PYP, GFP and other proteins (tyrosinate anions certainly exist
in various proteins even if they have been seldom noted) are
probably protected from oxidation by the presence of hydrogen
bonds formed to the phenolate anion.
5561 unique (Rint = 0.063), R1 = 0.061, wR2 = 0.227 (all data).
CCDC reference number 259700.
Crystal data for 1ꢀ–O−(NEt4 )·H2O‡. C19H34N2O2·H2O,
+
¯
M = 340.50, triclinic, space group P1, a = 10.0678(16), b =
◦
◦
˚
12.211(3), c = 9.0829(12) A, a = 97.147(15) , b = 92.285(15) ,
◦
3
˚
c = 109.753(14) , V = 1038.8(3) A , Z = 2, l(Mo–Ka) =
0.073 mm−1, 5729 reflections measured, 4752 unique (Rint
=
0.035), R1 = 0.069, wR2 = 0.277 (all data). CCDC reference
number 259699.
Crystal data for 2ꢀ–O–(NMe4 )‡. C20H35N3O3, M = 365.51,
+
orthorhombic, space group Cmc21, a = 13.2912(6), b =
3
˚
˚
13.0775(5), c = 12.1094(5) A, V = 2104.80(15) A , Z = 4, l(Mo–
Ka) = 0.078 mm−1, 2451 reflections measured, 2171 unique
(Rint = 0.036), R1 = 0.039, wR2 = 0.093 (all data). CCDC
reference number 259701.
Experimental
pH titration
The pH of 10 mM solution of each phenol was determined
using a Metrohm 716 DMS titrino combined with a Metrohm
728 stirrer and a saturated calomel LL micro pH glass electrode.
The saturated calomel micro glass electrode was calibrated with
the 0.05 M KHC6H4(COO)2 buffer (pH = 4.01) and the 0.025 M
KH2PO4–Na2HPO4 buffer (pH = 6.86) at 30 ◦C. The sample
was dissolved in a small amount of THF and to the solution
was added Triton X-100. After removal of THF under reduced
pressure, the obtained residue was diluted with degassed water
to give a micellar solution. The final concentration is 10% Triton
X-100 aqueous solution containing 10 mM of the sample. The
solution was titrated with 0.1 M NaOH aq. at 30 ◦C. The pKa
value was estimated by the following equation: pKa = pH −
log[Na+] + log{[phenol]0 − [Na+]}.
Crystal data for 1ꢀ–OH‡. C11H15NO2, M = 193.24, mon-
oclinic, space group P21/c, a = 14.266(6), b = 12.599(4),
◦
3
˚
˚
c = 19.587(4) A, b = 100.86(2) , V = 3457.3(18) A , Z =
12, l(Mo–Ka) = 0.077 mm−1, 7518 reflections measured, 7197
unique (Rint = 0.055), R1 = 0.048, wR2 = 0.159 (all data). CCDC
reference number 259698.
Acknowledgements
One of the authors (D.K.) expresses his special thanks for the
Center of Excellence (21COE) program “Creation of Integrated
EcoChemistry of Osaka University”.
References
Oxidation by dioxygen
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10 mm) was added 2 mL of acetonitrile solution containing
0.1 mM of the samples. After shaking for 30 seconds, the cell
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X-Ray structure determination
Each single crystal of 1ꢀ–OH, 1ꢀ–O−(NEt4 ) and 2ꢀ–OH was
+
sealed in a glass capillary and 1–OH and 2ꢀ–O−(NMe4 ) were
+
mounted in a loop with Nujol. The X-ray data of 1ꢀ–OH, 1ꢀ–
+
O−(NEt4 ) and 2ꢀ–OH were collected at 298 K on a Rigaku
7 S. Un, M. Atta, M. Fontecave and A. W. Rutherford, J. Am. Chem.
Soc., 1995, 117, 10713–10719.
AFC7R diffractometer and those of 1–OH and 2ꢀ–O−(NMe4 )
+
8 L. Sun, M. Burkitt, M. Tamm, M. K. Raymond, M. Abrahamsson,
D. LeGourrie´rec, Y. Frapart, A. Magnuson, P. H. Kenez, P. Brandt,
were collected at 200 K on a Rigaku Raxis-RAPID Imaging
Plate diffractometer with graphite monochromated Mo Ka
˚
A. Tran, L. Hammarstro¨m, S. Styring and B. Akermark, J. Am.
˚
(k = 0.71069 A). The structure was solved by the direct
Chem. Soc., 1999, 121, 6834–6842.
+
method (SIR9234 for 1–OH, 1ꢀ–OH and 2ꢀ–O−(NMe4 ) and
9 T. Maki, Y. Araki, Y. Ishida, O. Onomura and Y. Matsumura, J. Am.
Chem. Soc., 2001, 123, 3371–3372.
+
MULTAN8835 for 1ꢀ–O−(NEt4 ) and SHELXS-9736 for 2ꢀ–
OH) and expanded using Fourier techniques using teXsan
crystallographic software37 and SHELXL-97.38 Non-hydrogen
atoms were refined anisotropically. The hydrogen atoms were
placed at calculated positions.
10 F. Thomas, O. Jarjayes, C. Duboc, C. Philouze, E. Saint-Aman and
J.-L. Pierre, Dalton Trans., 2004, 2662–2669.
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12719.
12 D. Kanamori, T. Okamura, H. Yamamoto and N. Ueyama, Angew.
Chem., Int. Ed., 2005, 44, 969–972.
Crystal data for 1–OH‡. C19H31NO2, M = 305.45, triclinic,
13 D. Kanamori, T. Okamura, H. Yamamoto, S. Shimizu, Y. Tsujimoto
and N. Ueyama, Bull. Chem. Soc. Jpn., 2004, 77, 2057–2064.
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15 A. Onoda, Y. Yamada, J. Takeda, Y. Nakayama, T. Okamura, M.
Doi, H. Yamamoto and N. Ueyama, Bull. Chem. Soc. Jpn., 2004, 77,
321–329.
¯
space group P1, a = 10.6747(6), b = 12.0073(3), c = 15.3190(11)
◦
◦
◦
˚
A, a = 101.634(3) , b = 99.209(4) , c = 90.717(4) , V =
3
−1
˚
1896.34(18) A , Z = 4, l(Mo–Ka) = 0.068 mm , 8344
reflections measured, 4113 unique (Rint = 0.064), R1 = 0.078,
wR2 = 0.248 (all data). CCDC reference number 259697.
Crystal data for 2ꢀ–OH‡. C16H24N2O3, M = 292.37, triclinic,
16 W. L. Mock and D. C. Y. Chua, J. Chem. Soc., Perkin Trans. 2, 1995,
¯
˚
2069–2074.
space group P1, a = 12.233(4), b = 13.207(4), c = 11.841(4) A,
a = 105.46(2)◦, b = 109.07(3)◦, c = 90.81(3)◦, V = 1732.0(10)
17 W. L. Mock and L. A. Morsch, Tetrahedron, 2001, 57, 2957–2964.
18 J. Chen, M. A. McAllister, J. K. Lee and K. N. Houk, J. Org. Chem.,
1998, 63, 4611–4619.
19 N. Ueyama, M. Inohara, A. Onoda, T. Ueno, T. Okamura and A.
Nakamura, Inorg. Chem., 1999, 38, 4028–4031.
3
−1
˚
A , Z = 4, l(Mo–Ka) = 0.078 mm , 5813 reflections measured,
‡ CCDC reference numbers 259697–259701. See http://www.rsc.org/
suppdata/ob/b4/b419361j/ for crystallographic data in .cif format.
20 C. Tommos and G. T. Babcock, Biochim. Biophys.Acta, 2000, 1458,
199–219.
1 4 5 8
O r g . B i o m o l . C h e m . , 2 0 0 5 , 3 , 1 4 5 3 – 1 4 5 9