K.R. Sangeetha Gowda et al. / Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 105 (2013) 229–237
231
(NIH) Yellow solid; Yield 72%; mp 181 °C; Anal. Calcd for
17H13N3O2: C, 70.09; H, 4.50; N, 14.42. Found: C, 69.80; H, 4.34;
DNA-binding experiments
C
N, 14.03%. IR (KBr):
m
(cmꢂ1): 3410, 3270, 1665, 1610, 1585,
The DNA-binding and cleavage experiments were performed at
room temperature. The DNA concentration per nucleotide was
determined by absorption spectroscopy using the molar absorp-
tion coefficient (6600 Mꢂ1 cmꢂ1) at 260 nm [27]. The absorption
titration experiments and viscosity measurements experiments
involving the interaction of the complexes with calf thymus DNA
were carried out in Tris–HCl buffer containing (5 mM Tris, pH
7.1, 50 mM NaCl) 5% DMF at room temperature. Phosphate buffer
(1 mM phosphate, pH 7, 2 mM NaCl) was used for thermal dena-
turation. Absorption titration experiments were carried out by
varying the DNA concentration and maintaining the complex con-
centration constant. Due correction was made for the absorbance
of DNA itself. Absorbance values were recorded after each succes-
sive addition of DNA solution and equilibration (ca. 10 min). The
absorption data were analysed for an evaluation of the intrinsic
binding constant Kb using the following equation:
1275. 1H NMR (DMSO-d6) d (ppm): 1H (d, ppm) 7.01 (d, 1H),
7.26 (t, 1H), 7.51 (t, 1H), 7.73 (d, 1H), 8.04 (d, 2H), 8.11 (d, 1H),
8.70 (d, 2H), 9.25 (s, 1H); UV kmax, nm: 364.
Synthesis of metal complexes
Synthesis of [Co(phen)(nih)] (PF6)2ꢀ3H2O (1) and [Co(bpy)(nih)]
(PF6)2ꢀ3H2O (2)
A hot methanolic solution of the 0.001 mol ligand NIH (0.29 g)
was mixed with a methanolic solution 0.001 mol of CoCl2ꢀ6H2O
(0.237 g) 25 cm3 and refluxed for 1 h. Cobalt (III) complexes were
obtained due to air oxidation [24–26]. To the above obtained com-
plex, 1 mmol (0.198 g) of 1,10-phenanthroline/or 2,20 bipyridine
(0.156 g) in 10 ml methanol was added drop wise with constant
stirring and refluxed for 4–5 h under nitrogen. It was then filtered
and the complex was precipitated upon addition of a saturated
ethanolic solution of ammonium hexafluorophosphate to the fil-
trate. It was filtered, washed with cold EtOH and dried under vac-
uum over CaCl2 before being recrystallized (acetone–ether).
Complex (1) Brown solid; Yield 63%; Anal. Calcd for C29H22-
CoN5O3: C, 63.62; H, 4.05; N, 12.79; Co, 10.76. Found: C, 63.04;
½DNAꢃ=ðea
ꢂ
ef Þ ¼ ½DNAꢃ=ðeb
ꢂ
ef Þ þ 1=Kbðea
ꢂ
ef
Þ
ð1Þ
where [DNA] is the concentration of DNA in base pairs, ea corre-
sponds to the apparent absorption coefficient Aabs/[M], ef corre-
sponds to the extinction coefficient for the free metal [M]
complex and eb corresponds to the extinction coefficient for the me-
tal [M] complex in the fully bound form. In plots of [DNA]/(ea
ꢂ
ef) vs
m
(cmꢂ1): 3218, 1635,
[DNA], Kb is given by the ratio of slope to the intercept.
H, 4.00; N, 12.09; Co,10.24%. IR (KBr):
Viscosity measurements were carried out using a semimicro
dilution capillary viscometer at room temperature. Flow time
was measured with a digital stopwatch, and each sample was mea-
sured three times, and an average flow time was calculated. Data
1614, 1546, 843, 818, 465, 360; UV kmax, nm: 447.
Complex (2) Brown solid; Yield 60%; Anal. Calcd for C27H22CoN5-
O3: C, 61.95; H, 4.24; N, 13.38; Co, 11.26. Found: C, 61.03; H, 4.14;
N, 12.92; Co, 11.13.%. IR (KBr):
m
(cmꢂ1): 3220, 1642, 1618, 1571,
were presented as (g/g0) versus [complex]/[DNA], where g is the
847, 817, 472, 364; UV kmax, nm: 440.
viscosity of DNA in the presence of the complex and g0 is that of
DNA alone [27–29].
Thermal denaturation experiments were carried out with a
Synthesis of [Ni(phen)(nih)](PF6)ꢀ2H2O (3) and
Shimazdu UV–Vis recording spectrophotometer coupled to
a
[Ni(bpy)(nih)](PF6)ꢀ2H2O (4)
temperature controller by monitoring the absorption at 260 nm
of CT-DNA at various temperatures [30,31].
This complex was prepared in a similar way to that described
for [Co(phen)(nih)](PF6)2ꢀ2H2O.
Complex (3) Brick red solid; Yield 64%; Anal. Calcd for C29H22-
NiN5O3: C, 63.65; H, 4.05; N, 12.80; Ni, 10.73. Found: C, 63.12; H,
DNA cleavage experiments
3.98; N, 12.16; Ni, 10.37%. IR (KBr):
1549, 843, 467, 358; UV kmax, nm: 436;
m
(cmꢂ1): 3217, 1637, 1612,
l
eff: 2.97 0.02 BM.
For the gel electrophoresis experiments, supercoiled pUC19
DNA was treated with Co(III) and Ni(II) complexes in Tris buffer
(50 mM Tris–acetate, 18 mM NaCl, pH 7.2), and the solution was
irradiated at room temperature with a UV lamp (365 nm, 10 W).
After being incubated at 37 °C for 1 h, electrophoresis was carried
out at 50 V for 2 h in Tris–borate EDTA (TBE) buffer. Electrophoresis
was carried out and bands were visualised by UV light and photo-
graphed to determine the extent of DNA cleavage from the inten-
sities of the bands using UVITEC Gel Documentation System
[13,14].
Complex (4) Brick red solid; Yield 60%; Anal. Calcd for C27H22-
NiN5O3: C, 61.98; H, 4.24; N, 13.39; Ni, 11.22. Found: C, 61.12; H,
4.19; N, 13.02; Ni, 11.09%. IR (KBr):
1571, 847, 485, 365; UV kmax, nm: 440;
m
(cmꢂ1): 3221, 1649, 1618,
leff: 3.07 0.02 BM.
Synthesis of [Co(nih)2](PF6)ꢀ3H2O (5) and [Ni(nih)2]ꢀ3H2O (6)
The complexes were synthesised with slight modifications of
the reported procedure [22]. To a refluxing solution of NIH
(0.50 g, 1.72 mmol) in MeOH (125 mL) was added dropwise a solu-
tion of CoCl2ꢀ6H2O and NiCl2ꢀ6H2O, (0.35 g, 0.87 mmol) in MeOH
(30 mL) respectively. An immediate darkening of the solution re-
sulted and reflux was continued for 1 h. The complex was precipi-
tated upon addition of a saturated ethanolic solution of ammonium
hexafluorophosphate. Upon cooling, precipitate was obtained,
which was filtered off, washed with EtOH then diethyl ether and
dried in a vacuum desiccator.
Antimicrobial study
The antimicrobial activity of the ligand and the complexes were
tested against the standard microbial strains P. aeruginosa ATCC-
20852, K. pneumoniae MTCC-618, S. aureus ATCC-29737, S. typhi
MTCC-3214, E. coli ATCC-25922 and C. albicans ATCC-2091. The pri-
mary screening was performed using agar well diffusion [32] at
fixed concentrations of 10 mg/ml by dissolving in 10% DMSO.
50 mg/ml Ciprofloxacin (fluoroquinolone antibiotic) and Miconaz-
ole as the positive control. The experiments were performed in
triplicates. The MIC of the chemically synthesized compound was
tested against bacterial strains through a macrodilution tube
method [33]. The test concentrations of chemically synthesized
compounds were made from 128 to 0.25 mg/ml in the sterile tubes
no. 1–11.
Complex (5) Brown solid; Yield 74%; Anal. Calcd for C34H24-
CoN6O4: C, 63.88; H, 3.78; N, 13.15; Co, 9.18. Found: C, 63.10; H,
3.45; N, 13.08; Co, 9.11.%. IR (KBr):
m
(cmꢂ1): 3219, 1638, 1616,
1545, 467, 363; UV kmax, nm: 380.
Complex (6) Brick red solid; Yield 71%; Anal. Calcd for C34H24Ni
N6O4: C, 63.85; H, 3.78; N, 13.14; Ni, 9.22. Found: C, 63.17; H, 3.32;
N, 13.00; Ni, 9.07%. IR (KBr): m
(cmꢂ1): 3220, 1640, 1618, 1552, 471,
359; UV kmax, nm: 365.