Biosynthesis of Lipstatin
J . Org. Chem., Vol. 66, No. 13, 2001 4677
of lipstatin from an unsaturated C14 carboxylic acid (13)
or its thio ester (14) and activated octanoate (15) as
shown in Scheme 2. Decarboxylative condensation could
afford a â-keto thioester (16). Reduction of 16 could yield
the diol 17. Lactonization of 17 could then yield the
â-lactone ring, and formylleucine substitution at C-5
could afford lipstatin.
(3-Oxop r op yl)tr ip h en ylp h osp h on iu m iod id e (6) was
prepared as described:9 1H NMR (360 MHz) δ ppm 9.60 (t, J
3
2
)
1.9 Hz, 1 H-3), 7.75-7.56 (m, 15 Harom.), 3.75 (dt,
J
HP
)
3
3
3
1
2.9 Hz, J ) 7.1 Hz, 2 H-1), 3.07 (dt, J HP ) 13.5 Hz, J ) 7.1
1
3
3
Hz, 2 H-2); C NMR (90.6 MHz) δ ppm 197.0 (C-3, J CP ) 11.3
4
2
Hz), 135.5 (3 Carom., J CP ) 3.3 Hz), 133.7 (6 Carom., J CP ) 10.0
3J CP ) 12.6 Hz), 117.0 (3 Carom., 1
Hz), 130.6 (6 Carom.
86.9 Hz), 35.7 (C-2,
,
J
CP
)
2
1
J CP ) 3.1 Hz), 15.7 (C-1,
PO ext.) δ ppm +25.5.
(3,3-Diisop r op oxyp r op yl)t r ip h en ylp h osp h on iu m io-
J
CP
) 55.9 Hz);
3
1
The absence of deuterium incorporation from the
P NMR (101.3 MHz, H
3
4
2
-position of octanoate puts stringent requirements on
the mechanism of lipstatin biosynthesis. Specifically, one
deuterium atom could be removed by carboxylation of
octanoate leading to hexyl malonyl CoA (15). The ob-
d id e (7). A 92.30 g portion of 6 (0.207 mol) was dissolved in
450 mL of a mixture of dichloromethane and 2-propanol (5:4,
v/v) and cooled to 0 °C in an ice bath. A 116.9 mL portion of
triisopropyl orthoformate (0.414 mol) and 1.5 mL of HCl
concentrated were added. The solution was stirred for 2 h and
allowed to warm to room temperature. Triethylamine was
added until an alkaline pH was reached, and approximately
half of the solvent was removed under reduced pressure. A
500 mL portion of a mixture of dichloromethane, diethyl ether,
and pentane (1:2:2, v/v/v) was added to induce crystallization,
and the mixture was cooled at - 80 °C overnight. The resulting
white crystals were removed by filtration, washed with cold
served removal of the second deuterium atom from [2,2-
2
2
H ]octanoate could proceed at the level of 15 during the
condensation process or at the level of 17 by epimeriza-
5
tion or a dehydration/rehydration process. It should be
noted that epimerization also appears to occur in the
1
3
biosynthesis of the polyketide 6-deoxyerythronolide B.
2
A nonenzymatic loss of H by enolization of 15, 16, or 17
does not appear plausible, since the rates of chemical
exchange are slow in malonyl-CoA derivatives compared
to the typical lifetimes of biochemical intermediates1
1
pentane, and dried in vacuo: yield 116.80 g (97%); H NMR
3
(
360 MHz) δ ppm 7.76-7.64 (m, 15 Harom.), 5.10 (t, J ) 4.7
4-16
3
Hz, 1 H-3), 3.86 (sept, J ) 6.1 Hz, 2 H-1′), 3.62 (m, 2 H-1),
(H. G. Floss, personal communication).
3
3
1
.85 (m, 2 H-2), 1.15 (d, J ) 6.1 Hz, 6 H-2′), 1.11 (d, J ) 6.1
1
3
4
Hz, 6 H-2′); C NMR (90.6 MHz) δ ppm 135.2 (3 Carom., J CP
)
)
)
Exp er im en ta l Section
2
3
3
.1 Hz), 133.5 (6 Carom., J CP ) 10.0 Hz), 130.5 (6 Carom., J CP
3
12.6 Hz), 118.0 (3 Carom., 1J CP ) 86.3 Hz), 98.3 (C-3, J CP
2
2
2
Ma ter ia ls. [2,2- H
2
]Octanoic acid (98% H) and [8,8,8- H
octanoic acid (98% H) were purchased from Phychem (D u¨ ren,
Germany). Deuterium (D , 99.6%) was from Cambridge Isotope
3
]-
2
2
17.7 Hz), 69.7 (2 C-1′), 29.0 (C-2, J ) 3.8 Hz), 23.2 (2 C-2′),
CP
1
31
2
H
2.9 (2 C-2′), 18.2 (C-1, J CP ) 53.5 Hz); P NMR (101.3 MHz,
2
3
PO
4
ext.) δ ppm +25.5.
Laboratories (Woburn, MA). All other chemicals were from
Aldrich (Steinheim, Germany), Sigma (Deisenhofen, Ger-
many), Fluka (Buchs, Switzerland), and Merck (Darmstadt,
Germany). Solvents were redistilled and dried over molecular
sieves (4 Å) or, in the case of THF and diethyl ether, sodium.
2
[2,3,4,4- H]Hexa n a l (4). A 17.64 g (0.180 mol) portion of
trans-2-hexenal (3) was added to a mixture of 1.7 g of
palladium (5%) on charcoal and 100 mL of ethyl acetate. The
mixture was flushed with nitrogen, evacuated, and then
NMR Sp ectr oscop y. NMR measurements were performed
incubated in a D -atmosphere for 96 h under room temperature
2
2
in CDCl
3
or CHCl
3
( H NMR experiments) at 17 °C using a
and normal pressure. After consumption of 4.1 L of deuterium
(0.183 mol), the reaction was stopped and the mixture filtered
through Celite. The filter cake was washed twice with diethyl
ether. The solvent was removed under reduced pressure at
room temperature. The resulting aldehyde was distilled im-
mediately prior to the subsequent Wittig reaction (bp 135 °C/
Bruker DRX 500 spectrometer operating at 500.13 MHz for
1
13
H experiments, 125.76 MHz for C experiments, and 76.77
2
MHz for H NMR experiments, a Bruker AM 360 spectrometer
1
operating at 360.13 MHz for H experiments and 90.6 MHz
1
3
for C experiments, or a Bruker AC 250 spectrometer operat-
1
13
1
ing at 250.13 MHz for H experiments, 62.9 MHz for
C
1013 mbar): yield 11.00 g (60%); H NMR (360 MHz) δ ppm
3
1
3
experiments, and 101.3 MHz for P experiments. The DRX
00 spectrometer was equipped with a lock-switch unit for H-
9.70 (t, J ) 1.8 Hz, 1 H-1), 2.37 (dt-like, H-2**), 1.56 (quint-
2
3
5
like, H-3**), 1.26 (m, H-4** + H-5), 0.84 (t, J ) 7.7 Hz, 3
H-6); 13C NMR (90.6 MHz) δ ppm 202.6 (C-1), 43.6 (C-2**),
decoupling experiments using the lock channel. NMR experi-
ments were performed with standard Bruker software (XWIN-
NMR 1.3). Prior to Fourier transformation, the free induction
decay was multiplied with a Gaussian function. NMR assign-
2
31.3 (C-4**), 22.4 (C-5**), 21.7 (C-3**), 13.7 (C-6*); H NMR
(76.7 MHz) δ ppm 2.36 (br s, D-2), 1.58 (br s, D-3), 1.24 (br s,
D-4).
1
ments were verified by two-dimensional NMR analysis ( H-
2
(
3Z)-[5,6,7,7- H]Non -3-en a l Diisop r op yl Aceta l (8). An
1
1
1
1
13
1
13
H-TOCSY, H- H-COSY, H- C-HMQC, H- C-HMBC)
8
8.76 g portion of dry 7 (0.162 mol) was suspended in 1200
mL of THF, and 162 mL of sodium bis-trimethyl silyl amide
1 M in THF, 0.162 mol) was added slowly under nitrogen.
3 3 4
and referenced to the CDCl solvent signal or external H PO
3
1
13
1
(
P NMR). C NMR data listed below were achieved by H-
decoupled measurements. ** in the spectroscopic data denotes
NMR signals of atoms that are strongly weakened by 2
(
The orange solution was stirred for 1 h at room temperature
and then cooled to -100 °C using liquid nitrogen in ethanol.
An 11.00 g portion of compound 4 (0.108 mol) was added
dropwise using a syringe, and the solution was allowed to
warm to room temperature overnight. An aqueous saturated
solution of ammonium chloride (250 mL) and 500 mL of diethyl
ether were added. The organic phase was separated, and the
aqueous phase was washed three times with 250 mL of diethyl
ether. The combined organic solutions were washed repeatedly
with aqueous saturated sodium chloride and then dried over
magnesium sulfate. The solvent was removed under reduced
pressure, and the crude product was purified by distillation
H
substitution, * denotes NMR signals of atoms that are slightly
2
weakened by H substitution.
P r ep a r a tion of La beled Com p ou n d s. Meth yl 5-oxo-
8
1
p en ta n oa te (5) was prepared as described: H NMR (250
3
MHz) δ ppm 9.78 (t, J ) 1.3 Hz, 1 H-5), 3.68 (s, 3 H-1′), 2.55
3
3
(
1
2
dt, J ) 7.1 Hz, 1.3 Hz, 2 H-4), 2.39 (t, J ) 7.1 Hz, 2 H-2),
3
13
.96 (quint, J ) 7.1 Hz, 2 H-3); C NMR (62.9 MHz) δ ppm
01.4 (C-5), 173.2 (C-1), 51.5 (C-1′), 42.8 (C-4), 32.8 (C-2), 17.2
(
C-3).
(
12) Bacher, A.; Stohler, P.; Weber, W. European Patent Application
EP 803 576, 29 Oct 1997; Appl. 97106445.6, Filed 18 April 1997.
13) Weissmann, K. J .; Timoney, M.; Bycroft, M.; Grice, P.; Hanefeld,
U.; Staunton, J .; Leadley, P. F. Biochemistry 1997, 36, 13849-13855.
14) Lee, R. E.; Armour, J . W.; Takayama, K.; Brennan, P. J .; Besra,
G. S. Biochim. Biophys. Acta 1997, 1346, 275-284.
15) Sedgwick, B.; Cornforth, J . W. Eur. J . Biochem. 1977, 75, 465-
79.
16) Sedgwick, B.; Cornforth, J . W.; French, S. J .; Gray, R. T.;
Kelstrup, E.; Willadsen, P. Eur. J . Biochem. 1977, 75, 481-495.
1
in vacuo (bp 72 °C/ 0.5 mbar): yield 17.08 g (65%); H NMR
3
(
(500 MHz) δ ppm 5.45 (m, 1 H-4), 5.39 (m, 1 H-3), 4.54 (t, J
3
3
) 5.6 Hz, 1 H-1), 3.87 (sept, J ) 6.2 Hz, 2 H-1′), 2.34 (t, J )
(
6
.2 Hz, 2 H-2), 2.03 (q-like, H-5**), 1.28 (m, H-6** + H-7** +
3
3
H-8), 1.19 (d, J ) 6.2 Hz, 6 H-2′), 1.14 (d, J ) 6.2 Hz, 6 H-2′),
(
3
13
0
.88 (t, J ) 6.6 Hz, 3 H-9); C NMR (125.8 MHz) δ ppm 132.1
C-4*), 124.3 (C-3), 100.1 (C-1), 67.8 (C-1′), 33.8 (C-2), 31.6 (C-
7**), 29.3 (C-6**), 27.5 (C-5**), 23.4 (2 C-2′), 22.6 (2 C-2′), 22.5
4
(
(