112510-75-5Relevant academic research and scientific papers
Novel amino linkers enabling efficient labeling and convenient purification of amino-modified oligonucleotides
Komatsu, Yasuo,Kojima, Naoshi,Sugino, Maiko,Mikami, Akiko,Nonaka, Ken,Fujinawa, Yumi,Sugimoto, Takashi,Sato, Kousuke,Matsubara, Kenichi,Ohtsuka, Eiko
, p. 941 - 949 (2008/09/17)
We developed new amino linker reagents for an oligonucleotide (ONT) terminus. These reagents consist of an aminoethyl carbamate main linkage and a side-chain residue, which was a naphthylmethoxymethyl, methoxymethyl, or methyl group or a hydrogen atom. Th
5′-Tethered Stilbene Derivatives as Fidelity- and Affinity-Enhancing Modulators of DNA Duplex Stability
Dogan, Zeynep,Paulini, Ralph,Stuetz, Jan A. Rojas,Narayanan, Sukunath,Richert, Clemens
, p. 4762 - 4763 (2007/10/03)
A series of 5′-linked stilbene-DNA conjugates with different substituents in the distal aromatic ring of the stilbene was prepared, and the effect of the modifications on duplex stability was determined via UV-melting curves. A trimethoxystilbene derivative as a 5′-substituent increases duplex melting points by up to 12.2 °C per modification. With this alkoxystilbene substituent, terminal mismatches in DNA duplexes lower the melting point by up to 23.4 °C over the perfectly matched control, whereas terminal mismatches in unmodified DNA cause melting point depressions of no more than 6.1 °C. An aminomethylstilbene substituent linked to an oligopyrrolamide minor groove binder increases the melting point of an all-A/T decamer by up to 32.7 °C, thus shifting the melting point into a range typical for duplexes with statistical G/C-content. An affinity- and selectivity-enhancing effect was also observed when the trimethoxystilbene cap was employed on a small DNA microarray. The phosphoramidite of the trimethoxystilbene can be readily employed in automatic DNA synthesis, facilitating the generation of DNA chips with improved fidelity. Copyright
Fluorescent quenching detection reagents and methods
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Page column 61, (2008/06/13)
Oligonucleotide-fluorophore-quencher conjugates wherein the fluorophore moiety has emission wavelengths in the range of about 300 to about 800 nm, and or where the quencher includes a substituted 4-(phenyldiazenyl)phenylamine structure provide improved si
Fluoresceinated FKBP12 ligands for a high-throughput fluorescence polarization assay
Dubowchik, Gene M.,Ditta, Jonathan L.,Herbst, John J.,Bollini, Sagarika,Vinitsky, Alexander
, p. 559 - 562 (2007/10/03)
Several fluoresceinated FKBP12 ligands have been prepared for a high-throughput fluorescence polarization assay. K(i)s for FKBP12 rotamase inhibition by these ligands range from 1.3 μM to 32 nM, and their design is based on X-ray crystal structures of FKBP12 complexed with known immunophilin ligands. (C) 2000 Elsevier Science Ltd. All rights reserved.
Antiviral liposome having coupled target-binding moiety and hydrolytic enzyme
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, (2008/06/13)
Complexes are prepared containing two or more different effector molecules joined to each other by a joining component. At least one of the effector molecules can bind to a target molecule and at least one of the other effector molecules has therapeutic p
