179762-64-2Relevant academic research and scientific papers
Effects of halogenated WNA derivatives on sequence dependency for expansion of recognition sequences in non-natural-type triplexes
Taniguchi, Yosuke,Nakamura, Ayako,Senko, Yusuke,Nagatsugi, Fumi,Sasaki, Shigeki
, p. 2115 - 2122 (2007/10/03)
Triplex-forming oligonucleotides (TFOs) are sequence-specific DNA-binding agents, but their target duplexes are limited to homopurine/homopyrimidine sequences because of interruption of the pyrimidines bases in the purine region. This problem has not been
Modified Nucleosides for Ribozyme Structure-Activity Studies
Matulic-Adamic, Jasenka,Karpeisky, Alexander M.,Gonzales, Carolyn,Burgin, Alex B.,Usman, Nassim,et al.
, p. S271 - S275 (2007/10/03)
C-Phenyl, C-p-aminophenyl and C-naphthyl as well as pyridine-4(2)-one ribofuranosides were synthesized and site-specifically incorporated into a hammerhead ribozyme using solid phase synthesis.The modified oligonucleotides were used to probe the structural requirements at position 7 for catalytic activity.A pyridine-4-one-base substitution at a single position (N7) within the ribozyme catalytic core increased catalytic rate 10-fold.C-Phenyl, N3-methyluracyl, and p-aminophenyl base substitution at N7 reproducibly increased the catalytic rate twofold.
Synthesis of 1-deoxy-1-C-(p-aniline)-β-D-ribofuranose and its incorporation into hammerhead ribozymes
Matulic-Adamic, Jasenka,Beigelman, Leonid
, p. 6973 - 6976 (2007/10/03)
p-AnilineC-ribofuranoside 11 was prepared in 5 steps from 1-bromo-4-lithiobenzene (1) and D-ribono-1,4 lactone 2. A three step derivatization of 11 yielded 3'-O-phosphoramidite 14 which was incorporated into ribozymes using the solid phase phosphoramidite procedure.
