Journal of Medicinal Chemistry
Article
5.6 Hz, 1H), 8.34 (t, J = 1.9 Hz, 1H), 8.17 (dd, J = 6.3, 1.4 Hz, 1H),
7.90 (dd, J = 8.4, 1.7 Hz, 1H), 7.42 (t, J = 8.1 Hz, 1H), 7.12 (dd, J =
7.9, 1.4 Hz, 1H), 3.92 (s, 1H) ppm. CX-4945: H NMR (600 MHz,
DMSO-d6): δ 12.04 (s, 1H), 10.30 (s, 1H), 10.16 (s, 1H),9.08 (d, J =
5.8 Hz, 1H), 9.00−8.97 (m, 1H), 8.94 (d, J = 8.5 Hz, 1H), 8.31−8.28
(m, 2H), 8.12 (d, J = 8.2 Hz, 1H), 8.03 (dd, J = 8.4, 1.5 Hz, 1H), 7.45
(t, J = 8.1 Hz, 1H), 7.17 (d, J = 7.9 Hz, 1H) ppm.
(500.00, 100.00, 20.00, 1.00, 0.80 nM) were added to the well as the
“positive control”, with the same solution without the inhibitor as
“blank”. After sealing the plate with a sealing film, the setup was
incubated at 37 °C for 30 min. After that, conjugate reagent (50 μL)
was added to each well, excepting blank holes, and incubated at 37 °C
for another 30 min. The color developing reagents A (50 μL) and B
(50 μL) were successively added to each hole, and the mixture was
shaken gently and mixed well, avoiding light for 10 min, and then stop
buffer (50 μL) was added to each hole. The reaction mixtures were
incubated at room temperature for 10 min and the value of O.D. was
measured via an enzyme-labeling instrument at a wavelength of 490
nm. The IC50 value of each compound represented as the mean SD
was obtained by three parallel experiments.
4.5. Western Blot Tests. A549 and A549/cDDP cells were
diluted into 1 × 105 cells/mL mixed liquid with the corresponding
medium and spread in a six-well plate and cultured at 37 °C for 12 h
and then treated with 20 μM of the tested compounds for 24 h. Two
cancer cells were collected, centrifuged, and washed with phosphate
buffer saline (PBS) and then lysed in lysis buffer (100 mM Tris-Cl,
pH 6.8, 4% (m/v) sodium dodecyl sulfonate, 20% (v/v) glycerol, 200
mM β-mercaptoethanol, 1 mM phenylmethylsulfonyl fluoride, and 1
g/mL aprotinin) and centrifuged at 15000 rpm for 15 min at 4 °C and
collected. The concentrations of total proteins were measured with
BCA protein assay reagents (Imgenex, USA). Protein (20−100 μg)
prepared from the indicated cells was loaded per lane and
electrophoresed in 8 or 10% sodium dodecyl sulfate polyacrylamide
gel electrophoresis and then transferred to poly(vinylidene difluoride)
Hybond-P membrane (GE Healthcare) using a transblot apparatus
(Bio-Rad, USA). The blots were blocked with 5% nonfat milk in
Trisbuffered saline with Tween 20 (TBST) buffer for 1 h and co-
incubated with primary antibodies (anti-p-AKT(ser129), anti-p-
Cdc37(ser13), anti-ALDH1A1, anti-γ-H2AX, anti-DKK1, anti-p-
GSK3β(ser9), anti-β-catenin, anti-Bcl-2, anti-Bax, anti-pro-caspase-3,
anti-pro-caspase-9, anti-cleaved-PARP, and anti-β-actin and diluted in
TBST overnight at 4 °C. The membrane was washed with TBST and
incubated with secondary antibodies conjugated with peroxidase for 2
h at 37 °C, then washed twice with TBST buffer and PBS once, and
visualized with chemiluminescence reagent (Thermo Fischer
Scientifics Ltd.)
4.6. ALDH1A1 Enzyme Activity Assay. ALDH1A1 kinase
(human) assay/inhibitor screening assay kit and ALDH1A1 enzyme
were purchased from Shanghai Fusheng Industrial Co., Ltd.
(Shanghai, China). The inhibitory activity of CX-4945 and HY1 on
ALDH1A1 enzyme was detected according to manufacturer’s
instruction provided in the ALDH1A1 assay kit. The specific test
procedure is the same as the CK2 kinase (human) assay/inhibitor
screening assay kit.
4.7. Cell Culture. Six different cells were used in this experiment
including A549 (non-small cell lung cancer), A549/cDDP (cisplatin-
resistant lung cancer), PC-3 (prostate cancer), HepG2 (liver cancer),
T24 (bladder cancer), and LO2 (normal live cells). All of them were
originally purchased from the Cell Bank of Shanghai Institute of Cell
Biology. A549, A549/cDDP, and PC-3 cells were cultured with a
complete medium containing 10% fetal bovine serum (FBS) and 90%
Roswell Park Memorial Institute-1640 (RPMI-1640) incomplete
medium at 37 °C in 5% CO2. HepG-2, T24, and LO2 cells were
cultured at 37 °C in 5% CO2 with Dulbecco’s modified Eagle medium
supplemented with 10% FBS. The culture medium was also
supplemented with D-glucose of 2 g/L, L-glutamine of 0.3 g/L,
sodium bicarbonate of 2 g/L, penicillin of 80 U/mL, and
streptomycin of 0.08 mg/mL, kept in a constant temperature
incubator containing 5% CO2 at 37 °C.
1
4.2.2. Synthesis and Characterization of HY1. To a solution of
compound 7 (1.09 g, 3 mmol) in MeOH (20 mL) was slowly added
hydrazine hydrate (1.5 g, 30 mmol) at room temperature. The
reaction mixture was heated to reflux for 72 h and monitored with
thin layer chromatography (TLC). After the substrate was completely
consumed, the reaction liquid was slowly poured into the ice water
mixture to separate out the yellow solid, filtering the precipitate, and
washed with ice methanol (3 × 10 mL) to obtain the crude product of
HY1. The crude product was recrystallized with 1, 4-dioxane (10 mL)
1
to get a bright yellow solid (0.989 g). Yield: 90.8%. H NMR (600
MHz, DMSO-d6): δ 10.14 (s, 1H), 10.08 (s, 1H), 9.63 (s, 1H), 8.95
(d, J = 6.0 Hz, 1H), 8.80 (d, J = 12.0 Hz, 1H), 8.55 (d, J = 6.0 Hz,
1H), 8.33 (t, J = 1.8 Hz, 1H), 8.21 (d, J = 1.6 Hz, 1H), 8.07 (d, J = 6.0
Hz, 1H), 7.91 (dd, J = 12.0, 1.6 Hz, 1H), 7.42 (t, J = 6.0 Hz, 1H),
7.12 (dd, J = 8.0, 1.4 Hz, 1H), 4.63 (s, 2H) ppm. 13C NMR (150
MHz, DMSO-d6): δ 165.77, 150.47, 148.13, 147.69, 143.76, 142.40,
134.73, 133.35, 130.52, 127.52, 126.26, 124.17, 123.00, 122.83,
122.60, 121.47, 120.57, 119.56, 116.79 ppm. HR-MS (m/z): (ESI)
calcd for C19H14ClN5O [M + H]+, 364.0965; found, 364.0967.
4.2.3. Synthesis and Characterization of HY1-Pt. HY1 (0.181 g,
0.5 mmol), DN604 (0.193 g, 0.5 mmol), and 3−5 drops of acetic acid
were mixed in methanol (20 mL). The mixture was stirred and heated
at 60 °C for 48−72 h in the dark. The reaction was monitored by
TLC. After the reaction finished, the resulting deposits were filtered
and washed with methanol (3 × 10 mL) to obtain the crude product
HY1-Pt. The crude product was recrystallized with dimethylforma-
mide (DMF)/1, 4-dioxane (1:4, v/v) to get a bright yellow solid
(0.365 g). Yield: 93.4%. 1H NMR (600 MHz, DMSO-d6): δ 11.15 (s,
1H), 10.19 (s, 1H), 9.67 (s, 1H), 8.99 (d, J = 4.2 Hz, 1H), 8.86 (d, J =
7.7 Hz, 1H), 8.58 (d, J = 3.8 Hz, 1H), 8.26 (s, 1H), 8.23 (s, 1H), 8.14
(d, J = 7.2 Hz, 1H), 7.93 (d, J = 7.3 Hz, 1H), 7.45 (t, J = 7.5 Hz, 1H),
7.14 (d, J = 6.9 Hz, 1H), 4.26 (s, 6H), 3.74 (s, 4H) ppm. 13C NMR
(150 MHz, DMSO-d6): δ 176.45, 176.23, 163.28, 159.72, 150.55,
148.18, 147.80, 143.63, 142.33, 135.12, 133.28, 130.62, 127.50,
126.91, 124.23, 123.84, 122.80, 122.69, 121.73, 120.64, 119.68,
116.83, 56.40, 49.60, 46.96 ppm. HR-MS (m/z): (ESI) calcd for
C25H22ClN7O5Pt [M + H]+, 731.1091; found, 731.1353.
4.3. Purity of Final Compounds. The purity of all final
compounds was determined by RP-HPLC (waters e2695, US)
equipped with an ODS column (250 × 4.6 mm, 5 μm) and a 2489
UV/vis detector. Detailed steps: CX-4945, HY1, and BBI608 were
dissolved in chromatographic pure methanol and filtered by organic
syringe filters of 0.45 μM aperture. The purity of these compounds
was investigated at 25 °C as the column temperature, using
acetonitrile/water (55:45, v/v) as the mobile phase at the flow rate
of 0.8 mL/min. The purity of CX-4945, HY1, and BBI608 was 99.43,
95.58, and 99.70%, respectively, analyzed by the peak area percentage
method. HY1-Pt was dissolved with a small amount of dimethyl
sulfoxide (DMSO), diluted with methanol, and filtered with an
organic syringe filter of 0.45 μM aperture. The purity of HY1-Pt was
investigated at 25 °C as the column temperature, using methanol/
water (60:40, v/v) as the mobile phase at the flow rate of 1.0 mL/
min. The purity of HY1-Pt was 97.40%, analyzed by the peak area
percentage method.
4.4. CK2 Activity Assay. CK2 kinase (human) assay/inhibitor
screening assay kit and CK2 enzyme were purchased from Shanghai
Fusheng Industrial Co., Ltd. (Shanghai, China). The inhibitory
activity of CX-4945, HY1, and HY1-Pt on CK2 enzyme was detected
according to manufacturer’s instruction provided in the CK2 assay kit.
Briefly, the CK2 reaction solution was added into each well of 96-well
plates after thawing, and five different concentrations of HY1-Pt
(500.00, 100.00, 20.00, 1.00, 0.80 nM) were added to each well as the
“test inhibitor” and five different concentrations of CX-4945 and HY1
4.8. Detection of ALDH Activity. For the evaluation of the
expression levels of ALDH1A1 in A549 cells exposed to CX-4945 (20
μM) and HY1 (20 μM), ALDEFLUOR (Stem cell Technologies,
Vancouver BC, CA) staining was measured using the FITC channel of
fluorescent activated cell sorting according to the manufacturer’s
instruction.
4.9. Real-Time Quantitative PCR. Total RNA was isolated by
using TRIZOL from A549 and A549/cDDPCD44bright cells treated for
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J. Med. Chem. 2021, 64, 4163−4178