A R T I C L E S
Esser-Kahn et al.
rounds. Debris was removed by centrifugation at 8000g for 15 min
to give a murky brown solution. Typical expression yielded 500 g
of wet cell mass per 120 L of broth.
25 µL microcapillary tubes (Drummond Scientific Co.). Each end
was then flame-sealed, leaving at least a 3 cm “air gap” between
sample and flamed end. A single ice crystal measuring less than
0.5 cm was then created at the left side of the microcapillary tube
by the application of freeze spray (Innovera, Deerfield, IL). Each
sample was placed in a jacketed bath that was cooled to -0.2 °C
with chilled isooctane. The bath was illuminated from below with
a light source that passed through a piece of polarizing film before
reaching the samples (polarizing film sheet 30 cm × 30 cm, Arbor
Scientific, Ann Arbor, MI). The temperature of the bath containing
the samples was lowered at a rate of 0.01 °C/min, and images were
captured every 5 min. A second piece of polarizing film was placed
between the top of the bath and the lens of the microscope at a 90°
angle to the first filter, such that light was unable to pass through
the filters unless its polarization had been altered by ice crystals.
Images were captured every 10 min with the second polarizing filter
in place.
Confirmation of Polymer Attachment Using Ultracentrifu-
gation. Samples that were 100 µM in T3AFP or SnAFP were
reacted with 500 µM TAMRA-NHS (Invitrogen, Carlsbad, CA) in
0.1 M sodium phosphate, pH 8.0, containing 1 mM EDTA. The
reaction proceeded for 3 h and was quenched by elution through a
NAP-5 column (GE Healthcare) to remove unreacted TAMRA-
NHS. The eluted protein (in 50 mM ammonium carbonate (AC)
buffer, pH 6.5) was then concentrated to 50 mg/mL for T3AFP
and 25 mg/mL for SnAFP. A 50 µL aliquot was reacted with
alkoxyamino-substituted HPMA polymer in a manner identical to
that described above. A fluorescence emission spectrum was
obtained from 550 to 700 nm (the integration over this wavelength
range was recorded as I) from 1 mL of sample. Samples were then
subjected to three rounds of ultrafiltration (100K MWCO, Milli-
pore). The retentate was collected and brought to a volume of 500
µL with AC buffer, and then the same fluorescence measurement
was performed (yielding an integrated spectral value of R). The
percent retention was calculated by the equation (I - R)/I × 100
and is graphed in Figure 2b. The error bars represent (1 standard
deviation from the mean for three independent measurements.
Attachment of Polymer-Protein Conjugates to Aldehyde-
Coated Glass Slides. Lyophilized samples of SnAFP or T3AFP
were weighed on a microbalance, with a typical weight of ∼2 mg,
and dissolved in PBS (10 mM sodium phosphate, 100 mM NaCl,
pH 6.5) to a concentration of 50, 25, 10, or 0 mg/mL. The solution
was then reacted by the addition of 5 mg aliquots of alkoxyamino-
substituted HPMA polymer from a stock solution of 100 mg/mL.
The samples were allowed to react for 1 h at room temperature.
The solution was diluted to 600 µL and then pipetted onto a cut
piece of aldehyde-coated glass (Nexterion Slide AL, Schott-
Nexterion, Jena, Germany) typically measuring 0.983 × 0.350 in.
The solution covered the entire surface. The glass had been
previously cleaned by sonication in H2O for 30 min. The glass
sample was placed in a micro Petri dish (Millipore) that was then
sealed with parafilm. The reaction on the glass surface was allowed
to proceed for 2 h at room temperature. The liquid containing the
remaining polymer and protein was then removed via pipet, and
the glass was washed first in PBS for 30 min and then with H2O
for 30 min by rotary shaking. The glass was air-dried and
subsequently used for the frosting inhibition experiments.
Affinity Purification of SnAFP and T3AFP and Modifica-
tion of the C-Termini through Native Chemical Ligation. The
methods used to produce chemically modified SnAFP and T3ASP
were based on a literature protocol.2a The same procedure was used
for both proteins. Before use, all buffers were cooled to 4 °C. The
SnAFP- or T3AFP-containing lysate was washed over 200 mL of
chitin resin (New England BioLabs, Inc., Ipswich, MA) in a 500
mL centrifuge flask for 1 h. The resin was then isolated by
centrifugation at 4 °C. The resulting resin-bound protein was placed
in a 500 mL Steritop filter unit (Millipore, Billerica, MA) and
washed with 4 L of wash buffer (0.02 M Tris, 0.5 M NaCl, 1 mM
EDTA, pH 7.5) that was cooled to 4 °C. Binding to the column
was confirmed by SDS-PAGE analysis of the eluent. A 150 mL
solution of 50 mM MESNa and 5 mM cysteine-ketone in wash
buffer (pH adjusted to 7.5) was flowed over the resin-bound protein
using suction. The column bed was then allowed to stand in a
minimal amount of this solution at 4 °C for 15 h with protection
from light. The protein was eluted from the column with the addition
of 200 mL of wash buffer. Purified protein was then buffer-washed
three times with wash buffer using Amicon Ultra 15 mL 3000
MWCO (Millipore) and incubated with an additional 25 mL of
chitin resin for 1 h. The chitin resin was removed by filtration
through a Steriflip filter unit (Millipore). Purified protein was then
buffer-exchanged into 25 mM sodium phosphate buffer (pH 6.5)
using Amicon Ultra 15 mL 3000 MWCO centrifugal ultrafiltration
membranes. The resulting solution was then passed through two
sequential PD-10 (GE Healthcare) buffer exchange columns to
transfer the protein into 50 mM ammonium carbonate buffer (pH
7.9) at 4 °C. The resulting solution was snap-frozen using liquid
N2 and lyophilized to produce a dried powder that was stored at
-20 °C. For all further reactions, the powder was first dissolved
in the designated buffer. This purification typically yielded 1 mg/L
of purified, modified protein. The entire procedure, except for
lyophilization, was performed in a cold room maintained at 4 °C.
Protein identity and purity were evaluated by SDS-PAGE with
Coomassie staining and/or by using MALDI-TOF MS.
Ice Recrystallization Inhibition Assay. The procedure was
based on the methods of Kent et al.9b and Knight et al.16
Lyophilized samples were weighed using a microbalance and
dissolved in phosphate-buffered saline (PBS, 10 mM sodium
phosphate, 100 mM NaCl, pH 7.5). Samples were then loaded by
capillary action into 25 µL microcapillary tubes (Drummond
Scientific Co., Broomall, PA), and each end was flame-sealed while
leaving at least a 1 cm “air gap” between sample and flamed end.
Samples were then snap-frozen for 10 s in 2,2,4-trimethylpentane
(isooctane) cooled with dry ice and immediately placed in a jacketed
beaker cooled to -6.0 °C using the same solvent. Images were
taken at 40× total magnification with lighting from below.
Authentic antifreeze protein type III (T3AFP, A/F Protein, Waltham,
MA) was used as a positive control. Bovine serum albumin (BSA,
Aldrich, St. Louis, MO) was used as a negative control.
Attachment of Polymers to Proteins for Thermal Hysteresis
Experiments. Samples of SnAFP and T3AFP were weighed on a
microbalance. The proteins were dissolved in 25 mM ammonium
carbonate buffer (pH 6.5) at a concentration of 50 mg/mL for
T3AFP and 25 mg/mL for SnAFP. The lower concentration was
chosen for SnAFP so that measurements of SnAFP and T3AFP
could be performed over the same temperature range. Alkoxyamine-
substituted HPMA polymer was then added to the solution at a
concentration of 25 mg/mL from a stock solution of 50 mg/mL in
the same buffer. The two components were allowed to react for
2 h at room temperature. The reaction solution was then diluted to
1/50th the initial concentration and loaded via capillary action into
Confirmation of Polymer Attachment Using Fluorescence.
Samples of T3AFP or SnAFP were prepared at 100 µM in 0.1 M
sodium phosphate buffer, pH 8.0, containing 1 mM EDTA.
TAMRA-NHS (Invitrogen) was added to a concentration of 500
µM. After 3 h, the reaction was quenched by elution through a
NAP-5 column (GE Healthcare) to remove unreacted TAMRA-
NHS. The eluted protein (in PBS) was then concentrated to 50 mg/
mL for both T3AFP and SnAFP in a volume of 40 µL, reacted
with alkoxyamino-substituted HPMA polymer, and subsequently
pipetted onto aldehyde-coated glass as noted above. All samples
designated “3a” in Figure 3b were incubated with T3AFP, SnAFP,
or rhodamine-labeled ketone S1 (see Supporting Information) while
(16) Knight, C. A.; Wen, D.; Laursen, R. A. Cryobiology 1995, 32, 23–
34.
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13268 J. AM. CHEM. SOC. VOL. 132, NO. 38, 2010