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M. Henary et al. / Bioorg. Med. Chem. Lett. 22 (2012) 1242–1246
reader (Molecular Devices, USA). We first performed MTT with a broader
concentration range (0.1–100 M with a 10-fold increment) to determine the
IC50 of the dyes. Since the IC50 range was between 1 and 10 M for DE and ME,
respectively, in PC-3 and below 1 M in HeLa, we decided to take a narrower
range to precisely determine the IC50 values. The IC50 table for HeLa, PC-3 and
HDF is shown in Table 1 in Supplementary data.
6.26 (d, JHH = 14.0 Hz, 2H), 7.18 (d, JHH = 7.6 Hz, 2H), 7.27 (m, 2H), 7.40 (m, 4H),
l
8.34 (d, JHH = 14.0 Hz, 2H); 13C NMR (CDCl3, 100 MHz) dC 173.8, 172.2, 150.2,
144.2, 142.3, 141.1, 128.8, 127.8, 125.3, 122.2, 110.9, 101.7, 51.6, 49.3, 44.8,
33.7, 28.2, 27.2, 26.8, 26.4, 24.6, 20.8; HRMS calcd for C44H56N2O4Cl, m/z
711.3921; observed m/z 711.3915. kmax absorption and fluorescence
wavelengths in methanol were 780 and 801 nm, respectively. Chloro-3-[2-
[1,3-dihydro-3,3-dimethyl-1-(methylhexanoate)-2H-indol-2-ylidene]-ethylidene]-
l
l
16. Makin, S. M.; Boiko, I. I.; Shavrygina, O. A. Zh. Org. Khim. 1977, 13, 1189.
17. Synthetic methods and spectroscopic characterization: All 1H NMR (400 MHz) and
13C NMR (100 MHz) spectra were recorded on a BRUKER AVANCE-400 NMR
spectrometer at ambient temperature with CDCl3 and DMSO-d6 as solvent and
tetramethylsilane (TMS) as an internal standard. High resolution electrospray
ionization (ESI) mass spectra were obtained on a Waters Micro-mass Q-TOF
micro analyzer in the Department of Chemistry, Instrumentation Facility at
Georgia State University. Melting points (open pyrex capillary) were measured
on a Thomas Hoover apparatus and are uncorrected. Starting reagents 2,3,3-
trimethyl indolenine and 6-bromohexanoic acid were purchased from Sigma
Aldrich or Alfa Aesar and were used as received. All of the solvents were at least
reagent grade and were used without further purification. 1-(5-Carboxypentyl)-
1-cyclo-1-yl]-ethenyl]-3,3-dimethyl-1-(5-carboxypentyl)-3H-indolum
bromide
(5). Greenish-gold solid, yield 30%, 800 mg, mp 165–167 °C; 1H NMR (CDCl3,
400 MHz) dH 1.53 (m, 4H), 1.72 (s, 14H), 1.87 (t, JHH = 7.4 Hz, 4H), 2.00 (m, 2H),
2.36 (t, JHH = 7.4 Hz, 2H), 2.42 (t, JHH = 7.4 Hz, 2H), 2.71 (m, 4H), 3.66 (s, 3H),
4.13 (m, 4H), 6.14 (d, JHH = 14.0 Hz, 2H), 7.13 (d, JHH = 7.4 Hz, 1H), 7.25 (m, 3H),
7.41 (m, 4H), 8.36 (q, JHH = 14.0 Hz, 2H); 13C NMR (CDCl3, 75 MHz) dC 176.2,
173.8, 172.8, 171.9, 150.7, 144.9, 144.0, 142.2, 142.0, 141.1, 140.9, 129.0, 128.8,
128.6, 127.3, 125.6, 125.2, 122.3, 112.2, 110.7, 101.6, 100.8, 51.6, 49.5, 49.2,
44.7, 44.5, 34.5, 33.9, 33.6, 29.6, 28.5, 28.1, 27.0, 26.5, 26.4, 26.3, 25.5, 24.5,
20.7; HRMS calcd for C43H54N2O4Cl, m/z 697.3772; observed m/z 697.3763.
kmax absorption and fluorescence wavelengths in methanol were 780 and
2,3,3-trimethyl-3H indolenium bromide, 2. 2,3,3-Trimethyl-3H indolenine
1
801 nm,
respectively.
Chloro-3-[2-[1,3-dihydro-3,3-dimethyl-1-(5-
(2.0 g, 12.6 mmol) and 6-bromohexanoic acid (7.35 g, 25.1 mmol) were mixed
in acetonitrile (15 mL) and heated to reflux for 18 h under nitrogen
atmosphere. The mixture was allowed to cool to room temperature. The
reaction was concentrated under vacuum to yield an oily residue, which was
dissolved in dichloromethane (5 mL). Ether was added dropwise to the
carboxypentyl)-2H-indol-2-ylidene]-ethylidene]-1-cyclo-1-yl]-ethenyl]-3,3-
dimethyl-1-(5-carboxypentyl)-3H-indolum bromide (6). Greenish-gold solid,
yield 20%, 520 mg, mp 171–173 °C; 1H NMR (CDCl3, 400 MHz) dH 1.56 (m,
4H), 1.71 (s, 12H), 1.76 (q, JHH = 7.4 Hz, 4H), 2.00 (br t, 2H), 2.46 (t, JHH = 7.4 Hz,
4H), 2.72 (br t, 4H), 4.13 (t, JHH = 7.4 Hz, 4H), 6.20 (d, JHH = 14.0 Hz, 2H), 7.22
(m, 4H), 7.38 (m, 4H), 8.33 (d, JHH = 14.0 Hz, 2H); 13C NMR (CDCl3, 75 MHz) dC
172.2, 148.0, 143.0, 142.0, 141.1, 128.6, 126.2, 125.1, 122.5, 111.5, 101.6, 49.0,
43.7, 33.5, 27.5, 26.7, 25.8, 25.6, 24.2; HRMS calcd for C42H52N2O4Cl, m/z
683.3616; observed m/z 683.3595. kmax absorption and fluorescence
wavelengths in methanol were 780 and 801 nm, respectively.
dichloromethane solution to give
a precipitate, which was filtered and
washed with ether to furnish 2 as a pale pink powder; yield 4.4 g (67%); mp
127–129 °C; 1H NMR (DMSO-d6, 400 MHz): d 1.43 (m, 2H), 1.54 (s, 6H), 1.56
(m, 2H), 1.85 (m, 2H), 2.23 (t, J = 7.6 Hz, 2H), 2.86 (s, 3H), 4.46 (t, J = 7.6 Hz, 2H),
7.62 (m, 2H), 7.85 (m, 1H), 7.99 (m, 1H), 11.98 (br s, 1H). Heptamethine cyanine
dyes 4, 5, and 6. A solution of salt 2 (2.40 g, 6.77 mmol), Vilsmeier–Haack
reagent 3 (1.10 g, 3.39 mmol) and sodium acetate (0.833 g, 10.2 mmol) in
acetic anhydride (15 ml) was heated at 90 °C for 3 h under nitrogen
atmosphere. The mixture was cooled to room temperature and quenched
with methanol (5 ml). After 10 min, the solution began boiling and turned
black. The solvent was concentrated under vacuum and the crude solid was
dissolved in dichloromethane (20 ml) and filtered to remove sodium acetate.
The mixture of dyes was separated by column chromatography on silica gel
eluting with methanol-dichloro-methane gradient from 1:30, 1:20, to 1:10.
The fractions of each dye were collected together and concentrated under
vacuum to give heptamethine cyanine dye diester 4, heptamethine cyanine
dye monoester 5, and heptamethine cyanine dye diacid 6. Chloro-3-[2-[1,3-
dihydro-3,3-dimethyl-1-(methylhexanoate)-2H-indol-2-ylidene]-ethylidene]-1-
18. Cell culture: PC-3 were grown in RPMI medium, and HeLa and HDF in DMEM
medium, supplemented with 10% fetal bovine serum (FBS) and 1% penicillin/
streptomycin.
19. Immunofluorescence microscopy: The cellular localization of the NIR dyes was
imaged using Indocyanine Green (ICG-B) filter Set (Chroma Technology, VT)
and 780 nm Collimated LED source (Zeiss, Germany) on an Axio Observer. A1
microscope (Zeiss, Germany). Cells were grown on glass coverslips for
immunofluorescence microscopy as described previously.20 After treatment
with drugs, cells were fixed with cold (À20 °C) methanol for 10 min and
blocked by incubating with 2% BSA/PBS at 37 8C for 1 h. Alexa FluorÒ 555
phalloidin (Invitrogen, Carlsbad, 1:500 dilution) was used to stain for actin and
was incubated with the coverslips for 1 h at room temperature. The cells were
washed with 2% BSA/PBS for 10 min at room temperature. Cells were mounted
with Prolong-Gold antifade reagent that contained DAPI (Invitrogen, Carlsbad).
20. Karna, P.; Rida, P. C.; Pannu, V.; Gupta, K. K.; Dalton, W. B.; Joshi, H.; Yang, V.
W.; Zhou, J.; Aneja, R. Cell Death Differ. 2011, 18, 632.
cyclo-1-yl]-ethenyl]-3,3-dimethyl-1-(methylhexano-ate)-3H-indolum
bromide
(4). Greenish-gold solid, yield 15%, 400 mg, mp 161–163 °C. 1H NMR (CDCl3,
400 MHz) dH 1.54 (m, 4H), 1.73 (s, 14H), 1.86 (m, 4H), 2.00 (m, 4H), 2.36 (t,
JHH = 7.6 Hz, 4H), 2.75 (t, JHH = 7.6 Hz, 4H), 3.65 (s, 6H), 4.25 (t, JHH = 7.6 Hz, 4H),
21. Han, H. K.; Oh, D. M.; Amidon, G. L. Pharm. Res. 1998, 15, 1382.