4
M. Wang et al. / Bioorganic & Medicinal Chemistry Letters xxx (2017) xxx–xxx
400 mesh) with a forced flow of the indicated solvent system in the proportions
described below. All moisture- and air-sensitive reactions were performed
under a positive pressure of nitrogen maintained by a direct line from a
nitrogen source. Analytical RP HPLC was performed using a Prodigy (Phenom-
States National Science Foundation (NSF) Major Research Instru-
mentation Program (MRI) grant CHE-0619254.
enex) 5
60% H2O to 70%CH3CN/30%H2O within 10 min; flow rate 1.0 mL/min; UV
(254 nm) and -ray (PIN diode) flow detectors. Semi-preparative RP HPLC was
performed using a Prodigy (Phenomenex) 5
m C-18 column, 10 Â 250 mm;
mobile phase 43%CH3CN/57%H2O; flow rate 7 mL/min; UV (254 nm) and -ray
(PIN diode) flow detectors. C18 Light Sep-Pak cartridges were obtained from
Waters Corporation (Milford, MA). Sterile Millex-FG 0.2 m filter units were
obtained from Millipore Corporation (Bedford, MA).(b). 2,5-Dichloro-N-
methylpyrimidin-4-amine (1): To a stirred solution of 2,4,5-trichloropyrimide
(3.0 g, 16.4 mmol) in anhydrous THF (45 mL) was added methylamine (2.0 M
solution in THF, 25 mL, 50.0 mmol) dropwise at 0 °C. After the reaction mixture
was warmed to room temperature (RT) and stirred overnight, it was diluted
with water and extracted with EtOAc. The combined organic layer was washed
with brine, dried over anhydrous Na2SO4 and filtered. The solvent was
evaporated in vacuo to afford 1 as a white solid (2.9 g, 98%), which was used
for next step without purification. 1H NMR (DMSO-d6): d 8.14 (s, 1H), 7.91 (br s,
1H), 2.87 (d, J = 3.0 Hz, 3H).(c). (3-Methoxy-4-nitrophenyl)(morpholino)metha-
lm C-18 column, 4.6 Â 250 mm; a gradient mobile phase 40%CH3CN/
References and notes
c
l
c
l
none (2): To
a stirred solution of 3-methoxy-4-nitrobenzoic acid (5.0 g,
25.4 mmol) in anhydrous toluene (50 mL) was added thionyl chloride (6 mL,
82.3 mmol). The reaction mixture was heated under reflux for 2 h, and the
solvent was evaporated in vacuo. To the residual was added anhydrous THF
(50 mL), followed by DIPEA (9.1 mL, 50.7 mmol) and morpholine (3.3 mL,
38.0 mmol) at 0 °C. After the reaction mixture was warmed to RT and stirred for
1 h, it was diluted with water and extracted with EtOAc. The combined organic
layer was washed with brine, dried over anhydrous Na2SO4 and filtered. The
solvent was evaporated in vacuo. The crude product was purified by silica gel
column chromatography with CH2Cl2/MeOH (100:1 to 100:3) as eluent to
afford 2 as a yellow solid (5.04 g, 75%); mp 104–105 °C. 1H NMR (DMSO-d6): d
7.93 (d, J = 8.5 Hz, 1H), 7.37 (d, J = 8.5 Hz, 1H), 7.12 (dd, J = 1.5, 8.0 Hz, 1H), 3.95
(s, 3H), 3.67 (m, 2H), 3.63 (m, 2H), 3.55 (m, 2H), 3.30 (m, 2H).(d). (4-Amino-3-
methoxyphenyl)(morpholino)methanone (3): A solution of compound 2 (5.0 g,
18.8 mmol) in anhydrous THF (15 mL) and MeOH (50 mL) was hydrogenated
with H2 (60 psi) over 10% Pd-C (520 mg) at RT for 5 h. The catalyst was
removed by filtration, and the solvent was evaporated in vacuo. The crude
product was purified by silica gel column chromatography with CH2Cl2/MeOH
(100:1–100:8) as eluent to afford 2 as a white solid (4.09 g, 92%); mp 146–
148 °C. 1H NMR (DMSO-d6): d 6.85 (d, J = 1.5 Hz, 1H), 6.80 (dd, J = 2.0, 8.0 Hz,
1H), 6.61 (d, J = 8.0 Hz, 1H), 5.15 (s, 2H), 3.77 (s, 3H), 3.59–3.57 (m, 4H), 3.51–
3.49 (m, 4H).(e). (4-((5-Chloro-4-(methylamino)pyrimidin-2-yl)amino)-3-meth-
oxyphenyl)(morpholino)methanone (HG-10-102-01, 4): To a stirred suspension
35. Chan BK, Estrada A, Marik J, Sweeney ZK. WO 2013/079496 A1.
of compound
1 (300 mg, 1.68 mmol) in 2-butanol (3 mL) was added TFA
(0.3 mL), followed by the addition of compound 3 (380 mg, 1.61 mmol). The
reaction mixture was heated under reflux overnight, and the solvent was
evaporated in vacuo. The residual was diluted with CH2Cl2, washed with
saturated aqueous NaHCO3 and brine. The organic layer was dried over
anhydrous Na2SO4 and filtered. The solvent was evaporated in vacuo. The crude
product was purified by silica gel column chromatography with CH2Cl2/MeOH
(100:5) as eluent to afford 4 as a white solid (350 mg, 73%); mp 167–169 °C. 1
H
NMR (DMSO-d6): d 8.41 (d, J = 8.5 Hz, 1H), 7.96 (s, 1H), 7.68 (s, 1H), 7.33–7.30
(m, 1H), 7.05 (d, J = 1.5 Hz, 1H), 7.01 (dd, J = 1.5, 8.0 Hz, 1H), 3.90 (s, 3H), 3.60
(m, 4H), 3.52 (m, 4H), 2.91 (d, J = 4.5 Hz, 3H). 13C NMR (DMSO-d6): d 169.0,
158.1, 157.4, 152.4, 147.2, 130.5, 128.0, 119.8, 117.4, 109.8, 104.9, 66.1, 56.0,
27.7. LC-MS (ESI, m/z): Calcd for C17H21ClN5O3 ([M+H]+) 378.1, found: 378.2.
HRMS (ESI, m/z): Calcd for C17H21ClN5O3 ([M+H]+) 378.1333, found: 378.1345.
(f). (4-((5-Chloro-4-(methylamino)pyrimidin-2-yl)amino)-3-hydroxyphenyl)(mor-
pholino)methanone (desmethyl-HG-10-102-01, 5): To
a stirred solution of
compound 4 (345 mg, 0.91 mmol) in anhydrous CH2Cl2 (6 mL) was added
BBr3 (1.0 M solution in CH2Cl2, 4 mL, 4.0 mmol) dropwise at -78 °C under N2
atmosphere. After the reaction mixture was warmed to RT and stirred
overnight, it was quenched with ice-water and neutralized with aqueous 1 N
NaHCO3 solution. The mixture was extracted with CH2Cl2. The combined
organic layer was washed with brine, dried over anhydrous Na2SO4 and
filtered. The solvent was evaporated in vacuo. The crude product was purified
by preparative TLC plates with CH2Cl2/MeOH (150:7) as eluent to afford 5 as an
off-white solid (94 mg, 28%); mp 213–215 °C. 1H NMR (DMSO-d6): d 10.4 (br s,
1H), 8.19 (d, J = 8.4 Hz, 1H), 7.95 (s, 1H), 7.86 (s, 1H), 7.34–7.31 (m, 1H), 6.91 (d,
J = 2.0 Hz, 1H), 6.87 (dd, J = 2.0, 8.4 Hz, 1H), 3.59–3.58 (m, 4H), 3.50 (m, 4H),
2.92 (d, J = 4.4 Hz, 3H). 13C NMR (DMSO-d6): d 169.6, 158.6, 158.1, 152.6, 146.1,
130.4, 128.9, 119.0, 118.8, 114.6, 105.1, 66.7, 28.2. LC-MS (ESI, m/z): Calcd for
49. (a). General: All commercial reagents and solvents were purchased from Sigma-
Aldrich and Fisher Scientific, and used without further purification.
CH3OTf was prepared according to a literature procedure.39 Melting points
were determined on MEL-TEMP II capillary tube apparatus and were
[
11C]
a
uncorrected. 1H and 13C NMR spectra were recorded on a Bruker Avance II
500 MHz NMR Fourier transform spectrometer at 500 and 125 MHz, respec-
tively. Chemical shifts (d) are reported in parts per million (ppm) relative to an
internal standard tetramethylsilane (TMS, d 0.0) (1H NMR) and to the solvent
signal (13C NMR), and coupling constants (J) are reported in hertz (Hz). Liquid
chromatography-mass spectra (LC-MS) analysis was performed on an Agilent
system, consisting of an 1100 series HPLC connected to a diode array detector
C
H
16H19ClN5O3 ([M+H]+) 364.1, found: 364.1. HRMS (ESI, m/z): Calcd for C16
19ClN5O3 ([M+H]+) 364.1176, found: 364.1182.(g). (4-((5-Chloro-4-(methy-
lamino)pyrimidin-2-yl)amino)-3-[11C]methoxyphenyl)(morpholino)methanone
-
([11C]HG-10-102-01, [11C]4): [11C]CO2 was produced by the 14N(p, 11C nuclear
a)
reaction in the small volume (9.5 cm3) aluminum gas target provided with the
Siemens RDS-111 Eclipse cyclotron. The target gas consisted of 1% oxygen in
nitrogen purchased as a specialty gas from Praxair, Indianapolis, IN. Typical
and
electrospray ionization. The high resolution mass spectra (HRMS) were
obtained using Waters/Micromass LCT Classic spectrometer. Chromato-
a 1946D mass spectrometer configured for positive-ion/negative-ion
irradiations used for the development were 58 lA beam current and 15 min on
a
target. The production run produced approximately 25.9 GBq of [11C]CO2 at
graphic solvent proportions are indicated as volume: volume ratio. Thin-layer
chromatography (TLC) was run using Analtech silica gel GF uniplates
(5 Â 10 cm2). Plates were visualized under UV light. Preparative TLC was run
using Analtech silica gel UV254 plates (20 Â 20 cm2). Normal phase flash
column chromatography was carried out on EM Science silica gel 60 (230–
EOB. Desmethyl-HG-10-102-01 (5, 0.1–0.3 mg) was dissolved in CH3CN
(300
was transferred to
activity) [11C]CH3OTf that was produced by the gas-phase production method39
lL). To this solution was added aqueous NaOH (2 N, 2
lL). The mixture
small reaction vial. No-carrier-added (high specific
a