Inorganic Chemistry
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(m, 4H, −CH2N), 3.93 (m, 2H, H-3′), 4.26 (m, 2H, −OH), 4.41 (d, 2H,
H-4′, J = 3.2 Hz), 4.49 (s, 2H, −OH), 4.90 (s, 1H, HCcarborane), 5.10 (s, 1H,
HCcarborane), 6.34 (t, 2H, H-1′, J = 6.8 Hz), 7.83 (s, 2H, H-6). 11B{1H}
NMR (CD3COCD3): δ −17.79 (s, 1B, B12−I, B9−I), −16.15 (s, 1B, B9−
I/B12−I), −11.04 (m, 12B, B3, B4, B5, B6, B7, B11), −7.19 (s, 4B, B8,
B10), −3.96 (s, 1B, B12−H/B9−H), −0.58 (s, 1B, B9−H/B12−H). 11B
NMR (CD3COCD3): δ −17.93 (s, 1B), −16.26 (s, 1B), −11.17 (m, 12B),
−7.33 (d, 4B, J = 156.2 Hz), −4.10 (d, 1B, J = 145.7 Hz), −0.70
(d, 1B, J = 153.5 Hz). HPLC retention time = 9.91 min (RP-18 analytical
HPLC, 1 mL flow rate, solvent system CH3CN/H2O, 60:40, isocratic
elution). MS (HR-ESI) for C17H33B10IN2O5 [(M + Na)+]. Calcd: m/z
603.2324. Found: m/z 603.2344. N5-I2: HPLC retention time = 11.21 min
(RP-18 analytical HPLC, 1 mL flow rate, solvent system CH3CN/H2O,
60:40, isocratic elution). MS (HR-ESI) for C17H32B10I2N2O5
[(M + Na)+]. Calcd: m/z 729.1259. Found: m/z 729.1310.
3-[5-(8,9,10,12-Tetraiodo-o-carboran-1-yl)pentyl]thymidine
(5, N5-I4). To a stirred solution of 328 (100 mg, 0.22 mmol) and
AlCl3 (440 mg, 3.3 mmol) in anhydrous CH2Cl2 was added dropwise a
1 M ICl solution in CH2Cl2 (1.1 mL, 1.1 mmol) at 0 °C. The reaction
mixture was stirred for 2 h at 0 °C and then refluxed for 2 days. The
reaction mixture was quenched with a saturated solution of Na2S2O3
and extracted with CH2Cl2. The organic layer was separated, and the
aqueous layer was washed with 2 × 10 mL of CH2Cl2.. The combined
organic layers were washed with brine, dried over anhydrous MgSO4,
and evaporated in vacuo. The product was crudely separated from the
decomposition products by column chromatography using CH2Cl2/
MeOH (10:1) or, alternatively, PhMe/CH3CN (3:2) as the solvent
system. Rf = 0.34 (CH2Cl2/MeOH, 10:1). Final purification, primarily by
separation from the triiodinated product, was accomplished by preparative
RP-18 HPLC (CH3CN/H2O, 60:40, isocratic elution) to furnish 5
(27 mg, 13%) as a yellow solid. HPLC retention time = 13.81 min (RP-
18 analytical HPLC, 1 mL flow rate, solvent system CH3CN/H2O, 60:40,
isocratic elution). 1H NMR (CD3COCD3): δ 0.6−4.0 (m, 6H, BH), 1.33
(m, 2H, −CH2), 1.61 (m, 4H, −CH2CH2), 1.83 (s, 3H, −CH3), 2.23
(dd, 2H, H-2′, J = 4.7 and 6.7 Hz), 2.45 (m, 2H, −CH2Ccarborane), 3.78
(m, 2H, H-5′), 3.88 (m, 2H, −CH2N), 3.94 (dd, 1H, H-3′, J = 3.1 and 6.1
Hz), 4.27 (s, 1H,−OH), 4.42 (s, 1H, −OH), 4.49 (s, 1H, H-4′), 5.72 (s,
1H, HCcarborane), 6.34 (t, 1H, H-1′, J = 6.8 Hz), 7.84 (s, 1H, H-6). 11B{1H}
NMR (CD3COCD3): δ −17.8 (s, 4B, B8−I, B9−I, B10−I, and B12−I),
−12.1 (s, 1B), −10.2, −8.4 (m, 5B). 11B NMR (CD3COCD3): δ −17.9
(s, 4B, B8, B9, B10, and B12), −12.1 (d, 1B, J = 205.2 Hz), −10.1, −8.3
(m, 5B). MS (HR-ESI). C17H30B10I4N2O5 [(M + H)+]. Calcd: m/z
960.9371. Found: m/z 960.9373. N5-I3: HPLC retention time = 13.60
min (RP-18 analytical HPLC, 1 mL flow rate, solvent system CH3CN/
H2O, 60:40, isocratic elution). MS (HR-ESI) for C17H31B10I3N2O5 [(M +
Na)+]. Calcd: m/z 855.0226. Found: m/z 855.0277.
layer was extracted with 2 × 30 mL of diethyl ether. The combined
organic layers were dried (MgSO4) and concentrated in vacuo. The crude
residue was purified by column chromatography using pentane to afford
8a/8b as colorless oil (2.0 g, 66%). Rf = 0.24−0.31. 1H NMR
(CD3COCD3): δ 0.30 (s, 6H, −Si(CH3)2), 0.33 (s, 6H, −Si(CH3)2),
1.04 (s, 9H, −C(CH3)3), 1.07 (s, 9H, −C(CH3)3), 1.47−2.23 (m, 9H,
BH), 4.52 (s, 1H, HCcarborane), 4.74 (s, 1H, HCcarborane). MS (HR-EI) for
C8H25B10ISi (M+). Calcd: m/z 384.1774. Found: m/z 384.1774.
A quantity of 100 mg of the mixture of 8a and 8b was separated by
column chromatography using pentane as the solvent system to give
58 mg of 8a (Rf = 0.31; mp 105−106 °C) and 31 mg of 8b (Rf = 0.24;
mp 125−126 °C). 8a. 1H NMR (CD3COCD3): δ 0.33 (s, 6H,
−Si(CH3)2), 1.09 (s, 9H, −C(CH3)3), 1.47−2.23 (m, 9H, BH), 4.77
(s, 1H, HCcarborane). 11B{1H} NMR (CD3COCD3): δ −15.0 (s, 1B,
B9−I), −11.7 (m, 4B, B3, B4, B5, B6), −8.9 (s, 2B, B7, B11), −4.6
(s, 2B, B8, B10), 2.3 (s, 1B, B12). 11B NMR (CD3COCD3): δ −15.0
(s, 1B), −10.4 (m, 6B), −4.6 (d, 2B, J = 152.6 Hz), 2.3 (d, 1B, J =
157.9 Hz, B12). MS (HR-EI) for C8H25B10ISi (M+). Calcd: m/z
1
384.1774. Found: m/z 384.1758. 8b. H NMR (CD3COCD3): δ 0.31
(s, 6H, −Si(CH3)2), 1.04 (s, 9H, −C(CH3)3), 1.47−2.23 (m, 9H,
BH), 4.55 (s, 1H, HCcarborane). 11B{1H} NMR (CD3COCD3): δ −14.4
(s, 1B, B12−I), −12.3 (m, 4B, B3, B4, B5, B6), −11.0 (m, 2B, B7,
B11), −5.2 (s, 2B, B7, B11), −0.2 (s, 1B, B9). 11B NMR
(CD3COCD3): δ −14.3 (s, 1B), −13.0 (s, 1B), −10.4 (m, 1B, J =
76.7 and 168.5 Hz), −5.2 (d, 1B, J = 154.3 Hz), −0.3 (d, 1B, J = 152.1
Hz). MS (HR-EI) for C8H25B10ISi (M+). Calcd: m/z 384.1774.
Found: m/z 384.1791.
1-(tert-Butyldimethylsilyl)-2-[5-(tert-butyldimethylsilyloxy)-
pentyl]-9-iodo-o-carborane and 1-(tert-Butyldimethylsilyl)-2-
[5-(tert-butyldimethylsilyloxy)pentyl]-12-iodo-o-carborane
(9a/9b). To a stirred solution of a mixture of 8a and 8b (6.52 g, 17
mmol) in 35 mL of anhydrous THF at −78 °C was added dropwise a
2.5 M solution of n-BuLi in hexanes (8.48 mL, 21.2 mmol). The reaction
mixture was stirred for 30 min at room temperature and then cooled to
0 °C, and TBDMSCl (8.21 g, 22 mmol) dissolved in THF (20 mL) was
added dropwise. The solution was stirred for 24 h, quenched with 20 mL
of water, and extracted with 60 mL of diethyl ether. The separated
aqueous layer was extracted with 2 × 30 mL of diethyl ether, and the
combined organic layers were dried (MgSO4) and concentrated in vacuo.
The crude residue was purified by flash chromatography to afford 9a/9b
(6.5 g, 66%). Rf = 0.72 (pentane/diethyl ether, 30:1). 1H NMR
(CD3COCD3): δ 0.05 (s, 6H, −Si(CH3)2), 0.05 (s, 6H, −Si(CH3)2), 0.39
(s, 6H, −Si(CH3)2), 0.43 (s, 6H, −Si(CH3)2), 0.89 (s, 9H, −C(CH3)3),
0.90 (s, 9H, −C(CH3)3), 1.09 (s, 9H, −C(CH3)3), 1.12 (s, 9H,
−C(CH3)3), 1.34−1.67 (m, 12H, CH2CH2CH2), 1.3−3.27 (m, 18H,
BH), 2.22 (m, 2H, CH2Ccarborane), 2.34 (m, 2H, CH2Ccarborane), 3.63 (dd,
4H, −CH2OTBDMS, J = 6.2 and 13.2 Hz). 11B{1H} NMR
(CD3COCD3): δ −15.9 (s, 1B, B12−I/B9−I), −14.2 (s, 1B, B9−I/
B12−I), −9.0 (m, 12B, B3, B4, B5, B6, B7, B11), −5.3 (m, 4B, B8, B10),
−2.5 (s, 1B, B12−H/B9−H), 2.0 (s, 1B, B9−H/B12−H). 11B NMR
(CD3COCD3): δ −15.9 (s, 1B), −14.2 (s, 1B), −9.2 (m, 12B), −5.3 (m,
4B), −2.4 (d, 1B, J = 148.6 Hz), 2.1 (d, 1B, J = 148.8 Hz). MS (HR-EI)
for C19H49B10IOSi2 [(M − 56)−]. Calcd: m/z 528.2744. Found: m/z
528.2760.
9-Iodo-o-carborane (7).30,31 To a solution of o-carborane (6; 2.0 g,
14 mmol) in anhydrous CH2Cl2 was added dropwise ICl (27.7 mmol,
27.7 mL of a 1 M solution in CH2Cl2) at 25 °C. The reaction mixture was
stirred for 5 h at 40 °C, quenched with a saturated aqueous solution of
Na2S2O3, and extracted with CH2Cl2. The organic layer was washed with
brine, dried (MgSO4), and evaporated in vacuo. The residue was purified
by column chromatography to afford 7 (2.7 g, 72%) as a off-white solid.
Rf = 0.38 (hexanes/ethyl acetate, 10:4). 1H NMR (CD3COCD3): δ 1.53−
3.21 (m, 9H, BH), 4.74 (s, 1H, HCcarborane), 4.95 (s, 1H, HCcarborane).
11B{1H} NMR (CD3COCD3): δ −16.5 (s, 1B, B9−I), −13.7 (s, 2B, B3,
B6), −12.8 (s, 2B, B4, B5), −12.1 (s, 2B, B7, B11), −7.3 (s, 2B, B8, B10),
−1.1 (s, 1B, B12). 11B NMR (CD3COCD3): δ −16.5 (s, 1B), −13.1 (m,
6B), −7.3 (d, 2B, J = 155.0 Hz), −1.2 (d, 1B, J = 151.2 Hz). MS (HR-EI)
for C2B10H9I (M+). Calcd: m/z 270.0909. Found: m/z 270.0912.
1-(tert-Butyldimethylsilyl)-9-iodo-o-carborane (8a) and 1-
(tert-Butyldimethylsilyl)-12-iodo-o-carborane (8b). To a stirred
solution of 7 (2.1 g, 7.8 mmol) in anhydrous tetrahydrofuran (THF)
at −78 °C was added dropwise a 2.5 M solution of n-BuLi in hexanes
(3.26 mL, 8.15 mmol). The reaction mixture was allowed to stir for
30 min at room temperature and cooled to 0 °C, and tert-
butyldimethylsilyl chloride (TBDMSCl; 1.29 g, 8.55 mmol) in
15 mL of anhydrous THF was added dropwise. The solution was
refluxed overnight, carefully quenched with 10 mL of water, and extracted
with 60 mL of diethyl ether. The layers were separated, and the aqueous
5-(9-Iodo-o-carboran-1-yl)pentan-1-ol and 5-(12-Iodo-o-car-
boran-1-yl)pentan-1-ol (10a/10b). To a solution of 9a/9b (2.37 g,
4.05 mmol) in 40 mL of THF was added dropwise at −78 °C a 1.0 M
solution of tetrabutylammonium fluoride (TBAF) in THF (6.1 mL,
6.1 mmol). The reaction mixture was stirred at 4 °C for 30 min,
acidified with 10% methanolic/HCl (20 mL), and then stirred for an
additional 30 min at 4 °C. The reaction mixture was extracted with
ethyl acetate (3 × 35 mL), and the combined organic layers were
washed with water, then saturated aqueous NaHCO3, dried over
anhydrous magnesium sulfate, and concentrated in vacuo. The residue
was purified by column chromatography (hexanes/ethyl acetate, 3:7)
to furnish 10a/10b (1.1 g, 76%). Rf = 0.54 (hexanes/ethyl acetate,
1
3:7). H NMR (CD3COCD3): δ 1.28−1.59 (m, 12H, −CH2CH2CH2),
1.3−3.27 (m, 18H, BH), 2.25 (m, 2H, −CH2Ccarborane), 2.38 (m, 2H,
−CH2Ccarborane), 3.50 (dd, 4H, −CH2OH, J = 5.3 and 10.2 Hz), 4.88 (br,
1H, HCcarborane), 5.09 (br, 1H, HCcarborane). 11B{1H} NMR (CD3COCD3):
631
dx.doi.org/10.1021/ic202150b | Inorg. Chem. 2012, 51, 629−639