Organic & Biomolecular Chemistry
Paper
16 H), 5.13 (s, 2 H), 7.35 (m, 5 H), and 7.66 (bs, NH). 13C NMR
Synthesis of dendron 8 (G1-Ac-Bn). Dendron 7 (60 mg,
(100 MHz, CDCl3, 25 °C): δ = 28.27, 29.30, 29.50, 36.80, 38.22, 0.046 mmol, 1 eq.) was dissolved in CH2Cl2 and mixed with
52.31, 53.30, 55.29, 58.91, 66.29, 69.08, 69.24, 69.96, 70.27, acetic anhydride (26.3 μL, 0.28 mmol, 6 eq.) and DIEA (97 μL,
70.29, 78.63, 128.11, 128.28, 128.45, 135.23, 155.88, 170.52, 0.56 mmol, 12 eq.). After stirring for 1 h, the mixture was evap-
and 171.11. Analytical HPLC: 5→100% CH3CN in water over orated and the crude product was purified by reverse phase
8 min, tR = 7.02 min (purity 99% determined at λ = 210 nm). chromatography (C18 column, 25→60% CH3CN in aqueous
Calcd mass for C81H149O26N11: 1692.0670; Calcd mass for 20 mM NH4HCO3 solution), affording the waxy dendron 8
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C81H148O26N11Na: 1714.0489; Calcd mass for C81H148O26N11K: (37 mg, 0.025 mmol, yield: 51%). H NMR (500 MHz, CDCl3,
1730.0228; Mass found by MALDI-TOF: 1693.1 (M + 1), 1715.1 25 °C): δ = 1.77 (m, 16 H), 1.95 (s, 12 H), 2.97 (bs, 4 H), 3.10
(M + Na) 1731.1 (M + K); Mass found by HPLC-MS: 1694.2 (bs, 4 H), 3.31 (m, 16 H), 3.38 (s, 2 H), 3.50 (t, 3J(H,H) =
(M + 1), 847.4 (M + 2)/2; Mass found by HRMS: 1692.0672, 6.02 Hz, 8 H), 3.53–3.60 (m, 32 H), 3.60–3.65 (m, 16 H), 5.15 (s,
1714.0483 (M + Na), 1730.0114 (M + K).
Synthesis of dendron (G1-Boc-COOH). Compound
2 H), 7.34 (m, 5 H), and 7.98 (bs, NH). 13C NMR (125 MHz,
CDCl3, 25 °C): δ = 23.35, 28.90, 29.30, 37.04, 37.90, 51.14,
6
5
(200 mg, 0.12 mmol, 1 eq.) was dissolved in 5 mL of MeOH, 51.79, 57.65, 67.04, 69.15, 69.91, 69.98, 70.06, 70.35, 70.41,
and 10% Pd/C (20.2 mg, 10% w/w) was added to this solution. 70.44, 128.44, 128.64, 128.69, 135.00, 169.42, and 170.39.
The resulting suspension was stirred for 1 h under an H2 Analytical HPLC: 5→100% CH3CN in water over 8 min, tR
=
atmosphere at rt. The catalyst was removed by filtration 4.26 min (purity 97% determined at λ = 210 nm). Calcd
through Celite, and the solvent was evaporated to afford mass for C69H125O22N11: 1459.9001; Calcd mass for
dendron 6 as a waxy solid (176 mg, 0.11 mmol, yield: 92%). 1H C69H124O22N11Na: 1481.8820; Mass found by MALDI-TOF:
NMR (400 MHz, CDCl3, 25 °C): δ = 1.43 (s, 36 H), 1.77 (m, 16 1460.9 (M + 1), 1482.9 (M + Na); Mass found by HPLC-MS:
H), 2.75 (bs, 8 H), 3.22 (m, 16 H), 3.32 (m, 10 H), 3.53 (m, 16 1461.0 (M + 1), 731.3 (M + 2)/2; Mass found by HRMS:
H), 3.59 (m, 16 H), 3.63 (m, 16 H), and 7.82 (bs, NH). 13C NMR 1459.8999, 1481.8816 (M + Na).
(100 MHz, CDCl3, 25 °C): δ = 28.40, 29.28, 29.65, 36.99, 38.26,
Synthesis of dendron 9 (G1-Ac-COOH). Dendron 8 (31 mg,
52.88, 53.59, 58.98, 69.30, 69.98, 70.05, 70.35, 70.39, 78.86, 0.021 mmol, 1 eq.) was dissolved in 5 mL of MeOH, and 10%
139.12, 156.11, and 170.68. Analytical HPLC: 5→100% CH3CN Pd/C (3 mg, 10% w/w) was added to the solution. The resulting
in water over 8 min, tR = 6.45 min (purity 97% determined at suspension was stirred for 1 h under an H2 atmosphere at rt.
λ = 210 nm). Calcd mass for C74H143O26N11: 1602.0206; Calcd The catalyst was removed by filtration through Celite, and the
mass for C74H142O26N11Na: 1624.0025; Mass found by MALDI- solvent was evaporated to afford dendron 9 as a waxy solid
1
TOF: 1625.3 (M + Na); Mass found by HPLC-MS: 1604.2 (M + (23 mg, 0.017 mmol, yield: 84%). H NMR (400 MHz, CDCl3,
1), 802.4 (M + 2)/2; Mass found by HRMS: 1602.0211, 25 °C): δ = 1.77 (m, 16 H), 1.97 (s, 12 H), 3.15 (bs, 4 H), 3.31
1624.0020 (M + Na).
Synthesis of dendron
(m, 16 H), 3.37 (bs, 4 H), 3.50 (t, 3J(H,H) = 5.78 Hz, 8 H),
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(G1-NH2-Bn). Totally protected 3.53–3.60 (m, 48 H), 4.00 (s, 2 H), and 8.00 (bs, NH). 13C NMR
dendron 5 (200 mg, 0.12 mmol, 1 eq.) was dissolved in 2 mL of (100 MHz, CDCl3, 25 °C): δ = 22.94, 28.81, 29.04, 37.06, 37.75,
dioxane and 4.0 M HCl in dioxane solution was added (5 mL, 51.01, 52.33, 53.40, 57.67, 69.01, 69.67, 69.84, 69.88, 70.24,
20 mmol, 166 eq.). The mixture was vigorously stirred for 1 h 70.31, 169.43, and 171.06. Analytical HPLC: 5→100% CH3CN
at rt and the resulting suspension was evaporated to obtain in water over 8 min, tR = 3.61 min (purity 99% determined at
the semi-solid product 7. The product was dissolved in 1 mL λ = 210 nm). Calcd mass for C62H119O22N11: 1369.8531; Calcd
of 20 mM NH4HCO3 and the salts were removed by reverse mass for C62H118O22N11Na: 1391.8351; Mass found by MALDI-
phase chromatography using a PoraPak column and 20% of TOF: 1370.9 (M + 1), 1392.9 (M + Na); Mass found by
CH3CN in water as an eluent, obtaining 134 mg of dendron 7 HPLC-MS: 1370.9 (M + 1), 686.1 (M + 2)/2; Mass found by
1
(0.10 mmol, yield: 87%). H NMR (400 MHz, D2O, 25 °C): δ = HRMS: 1369.8502, 1391.8330 (M + Na).
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1.80 (m, 8 H), 1.98 (m, 8 H), 3.09 (m, 4 H), 3.13 (t, J(H,H) =
Synthesis of dendron 10 (G1-NH2-COOH). Dendron 6
3
7.07 Hz, 8 H), 3.27 (t, J(H,H) = 6.90 Hz, 8 H), 3.41 (m, 12 H), (55 mg, 0.034 mmol, 1 eq.) was dissolved in 2 mL of dioxane
3.56 (t, J(H,H) = 6.41 Hz, 8 H), 3.69 (m, 40 H), 4.35 (s, 2 H), and 4.0 M HCl in dioxane solution was added (5 mL, 20 mmol,
3
5.37 (s, 2 H), and 7.49 (m, 5 H). 13C NMR (100 MHz, D2O, 588 eq.). The mixture was vigorously stirred for 1 h at rt and
25 °C): δ = 13C NMR (100 MHz, D2O, 25 °C): δ = 26.73, 28.60, the resulting suspension was evaporated, obtaining the semi-
36.57, 37.89, 50.76, 53.30, 53.48, 57.89, 68.49, 68.55, 68.71, solid product 10. The product was dissolved in 1 mL of 20 mM
69.56, 69.62, 69.76, 69.79, 128.49, 129.14, 129.21, 135.05, NH4HCO3 and the salts were removed by reverse phase
168.02, and 172.31. Analytical HPLC: 5→100% CH3CN chromatography using a PoraPak column and 20% of CH3CN
in water over 8 min, tR = 3.44 min (purity 92% determined in water as an eluent, obtaining 34 mg of dendron 10
1
at
λ
=
210 nm). Calcd mass for C61H117O18N11: (0.028 mmol, yield: 83%). H NMR (400 MHz, D2O, 25 °C): δ =
3
1291.8573; Calcd mass for C61H116O18N11Na: 1314.8470; 1.83 (m, 8 H), 1.97 (m, 8 H), 3.13 (t, J(H,H) = 6.64 Hz, 8 H),
Mass found by MALDI-TOF: 1292.9 (M + 1), 1314.9 (M + Na); 3.23 (bs, 4 H), 3.33 (t, J(H,H) = 5.98 Hz, 8 H), 3.45 (bs, 4 H),
3
3
Mass found by HPLC-MS: 1294.0 (M + 1), 647.1 (M + 2)/2, 3.59 (t, J(H,H) = 6.07 Hz, 8 H), 3.65–3.73 (m, 40 H), 3.77 (bs,
431.8 (M + 3)/3, 324.0 (M + 4)/4; Mass found by HRMS: 2 H), and 3.97 (s, 8 H). 13C NMR (100 MHz, D2O, 25 °C): δ =
1291.8570.
29.84, 31.56, 39.94, 40.97, 53.81, 55.83, 56.94, 60.08, 71.59,
This journal is © The Royal Society of Chemistry 2013
Org. Biomol. Chem., 2013, 11, 4109–4121 | 4117