84
K. Sampath et al. / Journal of Molecular Structure 1046 (2013) 82–91
[21] using SHELXS-97, which revealed the position of all non-
hydrogen atoms, and was refined by full-matrix least squares on
F2 (SHELXL-97) [22]. All non-hydrogen atoms were refined aniso-
tropically, while the hydrogen atoms were placed in calculated
positions and refined as riding atoms.
sufficiently free of protein. The CT-DNA concentration per nucleo-
tide was determined spectrophotometrically by employing an
extinction coefficient of 6600 Mꢁ1 cmꢁ1 at 260 nm. The com-
pounds were dissolved in a mixed solvent of 5% DMSO and 95%
Tris–HCl buffer. Stock solutions were stored at 4 °C and used with-
in 4 days. Absorption titration experiments were performed with
2.4. Preparation of ruthenium(III) complexes
fixed concentrations of the complexes (25
lM) with varying con-
centration of DNA (0–50 M). While measuring the absorption
l
2.4.1. Synthesis of [RuCl2(PPh3)2L1] (3)
spectra, an equal amount of DNA was added to both the test solu-
tion and the reference solution to eliminate the absorbance of DNA
itself.
A methanolic solution (20 mL) containing HL1 (1) (0.110 g,
0.5 mmol) and triethylamine (0.07 mL, 0.5 mmol) were added to
[RuCl3(PPh3)3] (0.452 g, 0.5 mmol) in benzene (20 mL). The result-
ing red color solution was refluxed for 8 h. The reaction mixture
was then cooled to room temperature, following which the result-
ing dark brown color precipitate was filtered off and then purity
was checked by TLC. This solid was crystallized from CH2Cl2/hex-
ane mixture. Our sincere effort to obtain single crystal of the com-
plexes went unsuccessful. Yield: 55%. M.P: 221–222 °C. Anal. calcd.
for C45H39Cl3N3P2RuS (%): C, 58.54; H, 4.26; N, 4.55; S, 3.47. Found
(%): C, 58.51; H, 4.29; N, 4.51; S, 3.40. EI-MS: Found m/z = 923 (M+)
2.5.2. Nuclease activity using gel electrophoresis
The DNA cleavage activity of the ruthenium(III) complexes was
monitored by agarose gel electrophoresis on CT-DNA. The tests
were performed in the absence and presence of activating agent,
H2O2 under aerobic condition. Hydrolytic cleavage was monitored
by 30 lM of CT-DNA and 40 lM of each complex (3–6) in 5% DMSO
and 95% Tris–HCl buffer (5 mM, pH 7.2) with 50 mM NaCl.
For oxidative cleavage, each reaction mixture contained 30
lM
(calculated m/z = 923.25 for M+). IR (KBr, cmꢁ1): 1580
(CAS); 541 (RuAN). UV–vis (DMSO), kmax (nm): 317, 365, 411
m
(C@N); 747
of CT-DNA, 30; 60; 90 lM of each complex (3–6) in 5% DMSO and
m
m
95% Tris–HCl buffer (5 mM, pH 7.2) with 50 mM NaCl and 60
lM of
(ILCT), 435 (LMCT). EPR (300 K, ‘g’ value): 1.95.
leff (300 K): 1.62 lB.
H2O2.
The samples with sufficient buffer were incubated for 2 h at
37 °C. After incubation, 1 L of loading buffer (0.25% bromophenol
2.4.2. Synthesis of [RuCl2(AsPh3)2L1] (4)
l
It was prepared using the same procedure as described for 3
with HL1 (1) (0.110 g, 0.5 mmol) and [RuCl3(AsPh3)3] (0.565 g,
0.5 mmol). Brown colored crystalline powder was obtained. Yield:
54%. M.P: 215–217 °C. Anal. calcd. for C45H39Cl3N3As2RuS (%): C,
53.45; H, 3.89; N, 4.16; S, 3.17. Found (%): C, 53.49; H, 3.91; N,
4.11; S, 3.12. EI-MS: Found m/z = 1011 (M+) (calculated
blue, 0.25% xylene cynol and 60% glycerol) was added to the
reaction mixture and loaded onto a 1% agarose gel containing
1.0 lg/mL of ethidium bromide. The electrophoresis was carried
out for 2 h at 50 V in Tris–acetic acid EDTA buffer. The bands were
visualized under UV light and photographed.
m/z = 1011.15 for M+). IR (KBr, cmꢁ1): 1579
522 (RuAN). UV–vis (DMSO), kmax (nm): 310, 368 (ILCT), 404
m(C@N); 742
m
(CAS);
2.5.3. Antioxidant activity
m
The 2,2-diphenyl-2-picryl-hydrazyl (DPPH) radical scavenging
activity of the compounds was measured according to the method
of Elizabeth and Rao [23]. The DPPH radical is a stable free radical
having a kmax at 517 nm. A fixed concentration of the experimental
(LMCT). EPR (300 K, ‘g’ value): 2.31. leff (300 K): 1.65 lB
.
2.4.3. Synthesis of [RuCl2(PPh3)2L2] (5)
It was prepared using the same procedure as described for 3
with HL2 (2) (0.138 g, 0.5 mmol) and [RuCl3(PPh3)3] (0.452 g,
0.5 mmol). Brown colored crystalline powder was obtained. Yield:
56%. M.P: 291–293 °C. Anal. calcd. for C45H39Cl2N4O2P2RuS (%): C,
57.88; H, 4.21; N, 6.00; S, 3.43. Found (%): C, 57.91; H, 4.29; N,
6.05; S, 3.48. EI-MS: Found m/z = 933 (M+) (calculated
compound (100 lL) was added to a solution of DPPH in methanol
(0.3 mM, 1 mL) and the final volume was made up to 4 mL with
double distilled water. DPPH solution with methanol was used as
a positive control and methanol alone acted as a blank. The solu-
tion was incubated at 37 °C for 30 min in dark. The decrease in
absorbance of DPPH was measured at 517 nm. The tests were
m/z = 933.81 for M+). IR (KBr, cmꢁ1): 1524
522 (RuAN). UV–vis (DMSO), kmax (nm): 320, 368, 406 (ILCT),
m
(C@N); 742
m(CAS);
run in triplicate, and various concentrations (20–100
the compounds used to fix concentration at which the
compounds showed 50% of activity. In addition, the percentage of
activity was calculated using the formula, of suppression
lg/mL) of
m
a
435 (LMCT). EPR (300 K, ‘g’ value): 2.60. leff (300 K): 1.69 lB
.
%
2.4.4. Synthesis of [RuCl2(AsPh3)2L2](6)
ratio = [(A0 ꢁ AC)/A0] ꢂ 100. A0 and AC are the absorbance in the
absence and presence of the tested compounds respectively. The
50% activity (IC50) can be calculated using the percentage of
activity.
It was prepared using the same procedure as described for 3
with HL2 (2) (0.138 g, 0.5 mmol) and [RuCl3(AsPh3)3] (0.565 g,
0.5 mmol). Dark red colored crystalline powder was obtained.
Yield: 54%. M.P: 278–280 °C. Anal. calcd. for C45H39Cl2N4O2As2RuS
(%): C, 52.90; H, 3.85; N, 5.48; S, 3.14. Found (%): C, 52.99; H, 3.84;
N, 5.51; S, 3.19. EI-MS: Found m/z = 1021 (M+) (calculated
2.5.4. In vitro cytotoxic activity assay
Cytotoxicity of the compounds were carried out on human
breast cancer cell line (MCF-7) was obtained from National Centre
for Cell Science (NCCS), Pune, India. Cell viability was carried out
using the MTT assay method [24]. MCF-7 cell was grown in eagles
minimum essential medium (EMEM) containing 10% fetal bovine
serum (FBS). For the screening experiment, the cells were seeded
onto 96-well plates at plating density of 10,000 cells/well and
incubated to allow for cell attachment at 37 °C, 5% CO2, 95% air
and 100% relative humidity for 24 h prior to the addition of the
compounds. The compounds were dissolved in DMSO and diluted
in the respective medium containing 1% FBS. After 24 h the
medium was replaced with the respective medium with 1% FBS
containing the compounds at various concentrations and
incubated at 37 °C under conditions of 5% CO2, 95% air and 100%
m/z = 1021.70 for M+). IR (KBr, cmꢁ1): 1523
522 (RuAN). UV–vis (DMSO), kmax (nm): 317, 368, 406 (ILCT),
m(C@N); 740 m(CAS);
m
430 (LMCT). EPR (300 K, ‘g’ value): 2.21. leff (300 K): 1.62 lB
.
2.5. Pharmacological properties
2.5.1. DNA binding experiments
All the experiments involving the binding of compounds with
CT-DNA were carried out in a doubly distilled water buffer with
tris(hydroxymethyl)-aminomethane (Tris, 5 mM) and sodium
chloride (50 mM) and adjusted to pH 7.2 with hydrochloric acid.
A solution of CT-DNA in the buffer gave a ratio of UV absorbance
of about 1.8–1.9 at 260 and 280 nm, indicating that the DNA was