7624
F. Curreli et al. / Bioorg. Med. Chem. 23 (2015) 7618–7628
through the NIH ARP. The Env-deleted proviral backbone plasmid
pNL4-3KFS DNA was kindly provided by Dr. E. Freed from NIH/NCI.
The HIV-1 Env molecular clone expression vector pHXB2 (X4)
DNA was obtained through the ARP from K. Page and D. Littman.34
The Env expression vector pSVIIIenv-ADA DNA was kindly pro-
vided by Dr. J.G. Sodroski.29 The HIV-1 Env molecular clones of
gp160 genes for HIV-1 Env pseudovirus production were obtained
as follows: the clones representing the standard panels A, A/D, A2/
D and D and panel C (QB099.391M.ENV.C8, QB099.391M.ENV.B1)
were obtained through the NIH ARP from J. Overbaugh.35,36 The
HIV-1 Env molecular clones of subtype A/G and the CRF01_AE
clone 269 were obtained through the NIH ARP from D. Ellenberger,
B. Li, M. Callahan, and S. Butera.37 The AE clones AA058 and CM244
were kindly provided by Drs. R.J. McLinden and A.L. Chenine from
US Military HIV Program, Henry M. Jackson Foundation (Silver
Spring, MD). The HIV-1 Env molecular clones of standard reference
subtype B SC422661.8, QH0692 clone 42, PVO clone 4 and TRO
clone 11 were obtained through the NIH ARP from D. Montefiori,
F. Gao, and M. Li. B.H. Hahn and J.F. Salazar-Gonzalez provided
pWITO4160 clone 33, pREJO4541 clone 67 and pRHPA4259 clone
7. B.H. Hahn and D.L. Kothe provided pTHRO4156 clone 18 and
pCAAN5342 clone A2.24,33,38 The subtype B pWEAUd15.410.5017
and p1058_11.B11.1550 were obtained through the NIH ARP from
Drs. B.H. Hahn, B.F. Keele and G.M. Shaw.39 The subtype C HIV-1
reference panel of Env clones were also obtained through the
NIH ARP from Drs. D. Montefiori, F. Gao, S.A. Karim and G. Ramjee
(Du156 clone 12 and Du172 clone 17); from Drs. D. Montefiori, F.
Gao, C. Williamson and S.A. Karim (Du422 clone 1), from Drs. B.
H. Hahn, Y. Li and J.F. Salazar-Gonzalez (ZM197M.PB7, ZM233M.
PB6, ZM249M.PL1 and ZM214M.PL15); from Drs. E. Hunter and C.
Derdeyn (ZM53M.PB12, ZM135M.PL10a and ZM109F.PB4); from
Drs. L. Morris, K. Mlisana and D. Montefiori, (CAP45.2.00.G3 and
CAP210.2.00.E8).
5.2.3. General procedure for the synthesis of (S)-2-((((9H-
fluoren-9-yl)methoxy)carbonyl)amino)-3-(4-
((cyclohexylmethyl)amino)phenyl)propanoic acid derivative
(883594, 883596, 883597, 883598, 883599, 883600)
To a solution of 2 (100 mg, 0.18 mmol) and DIPEA (65
ll,
0.37 mmol) in dry THF (4 mL) a solution of an acid anhydride or
acid chloride (0.28 mmol) in dry methylene chloride (1 mL) was
added dropwise with stirring at 0 °C in about 20 min. The reaction
mixture was then allowed to warm up to room temperature and
stirred for 2–3 h. It was then diluted with methylene chloride
(50 mL) and washed with water (30 mL), saturated sodium bicar-
bonate (30 mL), brine (30 mL) and dried over anhydrous Na2SO4.
The solvent was removed in vacuo to give crude (S)-2-((((9H-fluo-
ren-9-yl)methoxy)carbonyl)amino)-3-(4-((cyclohexylmethyl)
amino)phenyl)propanoic acid derivative, which was purified by
HPLC to obtain pure derivatives 883594 (33 mg, 96% purity),
883596 (54 mg, 98.8% purity), 883597 (73 mg, 99% purity),
883598 (54 mg, 99% purity), 883599 (25 mg, 98.9% purity),
883600 (53 mg, 97.9% purity).
883594: Yield: 33%; 1H NMR (400 MHz, DMSO-d6) d: 7.896 (d,
J = 7.2 Hz, 2H), 7.820 (d, J = 8.8 Hz, 1H), 7.656 (m, 2H), 7.675–
7.629 (m, 2H), 7.357–7.316 (m, 4H), 7.138 (d, J = 8.0 Hz, 1H),
4.242–4.114 (m, 4H), 3.476–3.424 (m, 2H), 3.329–3.279 (m, 1H),
3.159–3.117 (m, 1H), 2.913–2.851 (m, 1H), 1.669–1.434 (m, 7H),
1.248 (m, 2H), 0.989 (s, 3H), 0.785–0.726 (m, 2H). ESI-MS: 540.7
(C33H36N2O5, [M+H]+).
883596: Yield: 42.6%; 1H NMR (400 MHz, DMSO-d6) d: 7.820 (d,
J = 7.2 Hz, 2H), 7.752 (d, J = 8.8 Hz, 1H), 7.598–7.548 (m, 2H),
7.359–7.305 (m, 4H), 7.247–7.241 (m, 2H), 7.158 (d, J = 7.6 Hz,
1H), 4.180 (m, 1H), 4.098–4.045 (m, 3H), 3.469–3.417 (m, 1H),
3.107–3.063 (m, 1H), 2.860–2.798 (m, 1H), 1.480–1.331 (m, 5H),
1.238–1.166 (m, 2H), 0.932 (m, 3H), 0.781–0.706 (m, 2H). ESI-
MS: 594.6, (C33H33F3N2O5, [M+H]+).
The ENV pseudotyped genes of BG505.T332N, KNH1144 and
B41 were kindly provided by Dr. J.P. Moore of the Weil Cornell
Medical College, NY.
SV-A-MLV-env was obtained through the NIH ARP from Drs. N.
Landau and D. Littman.
883597: Yield: 62.7%; 1H NMR (400 MHz, DMSO-d6) d: 7.891 (d,
J = 7.2 Hz, 2H), 7.842 (d, J = 8.8 Hz, 1H), 7.697 (d, J = 7.2 Hz, 1H),
7.627 (d, J = 7.2 Hz, 1H), 7.430–7.305 (m, 6H), 7.048 (d, J = 7.6 Hz,
1H), 4.272–4.232 (m, 1H), 4.110 (s, 3H), 3.417 (s, 1H), 3.325–
3.274 (m, 1H), 3.173–3.131 (m, 1H), 2.900–2.837 (t, J = 12.6 Hz,
1H), 1.737–1.328 (m, 13H), 1.242 (s, 1H), 1.010 (m, 5H), 0.807–
0.776 (m, 3H), 0.538–0.425 (m, 2H). ESI-MS: 622.8 (C39H46N2O5,
[M+H]+).
5.2. Synthesis
5.2.1. Synthesis of 882376 and 882896
883598: Yield: 46.8%; 1H NMR (400 MHz, DMSO-d6) d: 7.888 (d,
J = 7.2 Hz, 2H), 7.832 (d, J = 8.8 Hz, 1H), 7.658–7.606 (m, 2H),
7.405–7.300 (m, 6H), 7.158–7.084 (m, 4H), 6.880 (d, J = 6.8 Hz,
2H), 4.287–4.229 (m, 1H), 4.114 (s, 3H), 3.498–3.446 (m, 2H),
3.358–3.146 (m, 4H), 2.920–0.859 (t, J = 12.2 Hz, 1H), 1.562–
1.446 (m, 5H), 1.262–1.243 (m, 1H), 1.006–0.949 (m, 3H), 0.811–
0.753 (m, 2H). ESI-MS: 616.8 (C39H40N2O5, [M+H]+).
The synthesis of 1 (882376) was performed by following a
reported method.13 882896 was prepared from 882376 by remov-
ing protecting groups Boc and Fmoc by 4.0 N HCl in Dioxane and by
20% piperidine in DMF, respectively. The molecular mass of these
molecules and all molecules reported subsequently were deter-
mined by low resolution mass spectrometry (LR-MS).
882376: 1H NMR (400 MHz, CD3Cl) d: 7.766 (d, J = 6 Hz, 2H),
7.588–7.556 (m, 2H), 7.408–7.378 (m, 2H), 7.324–7.294 (m, 2H),
7.110 (s, 4H), 4.721–4.706 (m, 1H), 4.435–4.326 (m, 2H), 4.217–
4.189 (m, 1H), 3.457 (d, J = 5.6 Hz, 2H), 3.153 (s, 2H), 1.663 (s,
4H), 1.447 (s, 9H), 1.255 (s, 4H), 1.131–1.117 (m, 3H). ESI-MS:
598.7 (C36H42N2O6, [M+H]+).
883599: Yield: 21.5%; 1H NMR (400 MHz, DMSO-d6) d: 7.894 (d,
J = 7.2 Hz, 2H), 7.825 (d, J = 8.8 Hz, 1H), 7.682–7.616 (m, 2H),
7.434–7.396 (m, 2H), 7.367–7.305 (m, 4H), 7.114 (d, J = 8.0 Hz,
1H), 5.567–5.500 (m, 1H), 4.790–4.727 (m, 2H), 4.278–4.220 (m,
1H), 4.151–4.105 (m, 3H), 3.330–3.278 (m, 1H), 3.166–3.124 (m,
1H), 2.908–2.846 (m, 1H), 2.098–1.855 (m, 4H), 1.550–1.432 (m,
5H), 1.243 (s, 1H), 0.999 (m, 3H), 0.842–0.708 (m, 2H). ESI-MS:
580.7. ESI-MS: 580.7 (C36H40N2O5, [M+H]+).
882896: 1H NMR (400 MHz, CD3Cl) d: 7.406 (s, 4H), 4.074–4.028
(m, 1H), 3.243–3.229 (m, 4H), 1.727–1.578 (m, 6H), 1.202–0.997
(m, 5H). ESI-MS: 276.4 (C16H24N2O2, [M+H]+).
883600: Yield: 42%; 1H NMR (400 MHz, DMSO-d6) d: 7.892 (d,
J = 7.2 Hz, 2H), 7.809 (d, J = 8.4 Hz, 1H), 7.673 (t, J = 6.8 Hz, 2H),
7.424–7.388 (m, 2H), 7.337–7.276 (m, 7H), 7.234–7.220 (m, 1H),
7.145–7.125 (d, J = 8 Hz, 2H), 5.073–5.000 (m, 2H), 4.210–4.136
(m, 4H), 3.383–3.330 (m, 2H), 3.123–3.080 (m, 1H), 2.891–2.829
(t, J = 12.4 Hz, 1H), 1.546–1.464 (m, 5H), 1.283–1.243 (m, 1H),
0.980–0.961 (m, 3H), 0.773–0.709 (m, 2H). ESI-MS: 632.4
(C39H40N2O6, [M+H]+).
5.2.2. Synthesis of 2
A solution of 1 (1.5 g, 2.5 mmol) in 20 mL of 4.0 N HCl/Dioxane
was stirred at room temperature for 2 h, the reaction mixture was
monitored by TLC. The 1 was reacted completely then the reaction
mixture was concentrated under vacuum to give 2, which was used
to next step without further workup.