MATERIALS AND METHODS
to solvent signal. One-dimensional 1H NMR, 13C NMR, and
distortionless enhancement by polarization transfer (DEPT 135),
were acquired using standard conditions.22 The spectra were
interpreted using the MestRe-C 2.3 software.
Materials. Riboflavin was purchased from Calbiochem (Darm-
stadt, Germany); riboflavin binding protein and retinol binding
protein (ABP) were from Fluka (Buchs, Switzerland). All the
organic solutions were purchased from Merck (Buchs, Switzer-
land) or Fluka.
For the acetylation: 1H NMR (DMSO-d8) δ 1.93-2.42 (6 s, 18H,
4CH3CO, 2CH3), 4.11-4.17 (m, 1H, CH2), 4.27-4.30 (m, 1H, CH2),
4.52-4.55 (m, 1H, CH2), 4.71-4.75 (m, 1H, CH2), 5.13-5.38 (m,
3H, 3 CH), 7.60 (s, 1H, aromatic), 7.74 (s, 1H, aromatic), 11.34
(s, 1H, NH); 13C NMR (DMSO-d8) δ 19.6-21.4 (6CH3, 4CH3CO,
2CH3), 44.5 (NCH2), 62.3 (1CH2, OCH2), 69.6 (CH, OCH), 70.5
(CH, OCH), 73.4 (CH, OCH), 117.1 (CH, aromatic), 131.9 (CH,
aromatic), 134.3-137.5 (4Cq, aromatic), 147.2 (1Cq, CdN), 151.3
(1Cq, CdN), 156.2 (1Cq, NCdO), 160.6 (1Cq, NCdO), 170.3-
171.0 (4 Cq, CdO).
Methods. Riboflavin Derivative Synthesis. Protection of
Hydroxyl Groups. A 5.0-g sample of riboflavin was added to a 400-
mL beaker containing 200 mL of a 1:1 (v/ v) mixture of glacial
acetic acid and acetic anhydride. After the dropwise addition of 1
mL of 70% perchloric acid, the mixture was stirred for 30 min at
40 °C.10 The mixture was cooled in an ice bath and diluted with
an equal volume of cold water, and the solution was then extracted
twice with 400 mL of chloroform. The combined chloroform
extracts were washed twice with 200 mL of deionized water and
the organic phase dried over anhydrous sodium sulfate.18 After
filtration, the solvent was removed under reduced pressure at 50
°C to a yield of 95% with a melting point of 219-220 °C.
Derivatization at the N-3 Position. A 1 mol equiv of 2′,3′,4′,5′-
tetra-O-acetylriboflavin was reacted with bromoacetic acid ethyl
ester (5 mol equiv) with stirring for 20 h at room temperature in
anhydrous N,N-dimethylformamide containing anhydrous potas-
sium carbonate (5 mol equiv). Solvent was removed by evaporation
under reduced pressure with warming, and the residue was
redissolved in an equal volume of methylene chloride and washed
twice with an equivalent volume of 1 N acetic acid and then twice
with water.19 The organic phase was dried over anhydrous sodium
sulfate, and the methylene chloride was removed overnight under
reduced pressure at 36 °C to a yield of 73%.
1
For the derivatization on N-3: H NMR (DMSO-d8) δ 1.1 (q,
3H, CH3), 1.93-2.46 (6 s, 18 H, 4CH3CO, 2CH3), 3.26 (s, 2H, CH2),
4.03-4.30 (m, 2H, CH2), 4.55-4.75 (m, 2H, CH2), 5.13-5.38 (m,
3H, 3 CH), 7.72 (s, 1H, aromatic), 7.78 (s, 1H, aromatic); 13C NMR
(DMSO-d8) δ 14.2 (CH3, 19.5-21.6), (6 CH3, 4CH3CO, 2CH3), 43.2
(NCH2), 44.9 (NCH2), 61.4 (1CH2, OCH2), 63.3 (1CH2, OCH2), 69.5
(CH, OCH), 70.5 (CH, OCH), 73.4 (CH, OCH), 117.1 (CH,
aromatic), 131.9 (CH, aromatic), 135.1-137.5 (4Cq, aromatic), 47.2
(1Cq, CdN), 151.3 (1Cq, CdN), 154.8 (1Cq, NCdO), 159.9 (1Cq,
NCdO), 168.1 (Cq, Cdo), 170.3-171.0 (4Cq, CdO).
For the deprotection: 1H NMR (D2O) δ 2.21 (s, 3H, CH3), 2.39
(s, 3H, CH3), 3.66-3.74 (m, 1H, CH2), 3.82-3.95 (m, 1H, CH2),
4.11-4.37 (m, 4H, 2 CH2), 4.46-4.63 (m, 3H, CH), 7.38 (s, 1H,
aromatic), 7.65 (s, 1H, aromatic); 13C NMR (D2O) δ 19.6 (1CH3),
21.4 (1CH3), 43.2 (NCH2), 44.2 (NCH2), 60.1 (1CH2, OCH2), 69.6
(CH, OCH), 72.8 (CH, OCH), 73.7 (CH, OCH), 125.2 (CH,
aromatic), 139.7 (CH, aromatic), 130.7-135.0 (4 Cq, aromatic),
148.9 (1Cq, CdN), 151.3 (1Cq, CdN), 156.6 (1Cq, NCdO), 160.8
(1Cq, NCdO), 174.8 (1Cq, CdO).
Deprotection of the Hydroxyl Groups. The residue was suspended
in 2 N HCl (equal volume of previous step), refluxed for 2 h
and evaporated to dryness.20
Formation of Activated Ester. A 0.50-mmol aliquot of N,N′-
dicyclohexylcarbidiimide (DCC) was added to a solution of
3-carboxymethylriboflavin (0.55 mmol) and N-hydroxysulfosuc-
cinimide sodium salt (sulfo-NHS; 0.50 mmol) in 15 mL of
anhydrous DMF at 0 °C, 48 h in the dark (to prevent photodeg-
radation of the N-10 side chain of Rf) at 4 °C under stirring.
Dicyclohexylurea formed during the reaction was removed by
filtration.
The activated product was isolated by evaporating of DMF at
reduced pressure and by washing the resulting residue with
ethanol. Any remaining DMF, DCC, or sulfo-NHS was removed
by ethanol, a solvent in which the activated ester product is not
soluble. The activated ester (powder form) prepared in this
manner was stable for at least 6 months when stored below
0 °C.21
NMR Analysis. Each step of organic synthesis was followed
by NMR analysis. The samples for NMR spectroscopy were
prepared in Wilmad 528-PP 5-mm Pyrex NMR tubes, using heavy
water or DMSO as solvent (0.7 mL). The NMR spectra were
acquired on a Bruker AM-360 spectrometer, equipped with a
quadrinuclear 5-mm probe head, at 360.13 MHz for 1H and at 90.03
MHz for 13C spectra. All shifts are cited in ppm measured relative
Fluorescence Measurements. A stock solution of 1 M
phosphate buffer (pH 7.4) was prepared monthly, and dilutions
to 0.1 and 0.01 M were used. A 2.0-mg sample of Rf derivative
(13.7 µM) was reacted under agitation for 1 h at room temperature
in 230.5 mL of 0.1 M phosphate buffer with 3 mol equiv
ethanolamine. This solution of blocked Rf was diluted 4 times
(concentration of 3.42 µM) in 0.1 M phosphate buffer. A 95-µL
sample of Rf and 5 µL of different concentrations of RBP or ABP
were introduced in the wells of a microtiter plate. The analysis
was performed with a SpectraFluor Plus (Tecan, Hombrechtikon,
Switzerland) for a fluorescent light setup at 360 nm and an
emission light read at 535 nm.
P reparation of the Chip Surface and SP R Analysis. Sur-
face immobilization and analysis were performed simultaneously
using a Biacore Q system (Biacore AB, Uppsala, Sweden) using
a carboxymethylated dextran sensor chip (CM5, Biacore AB).
HBS-EP (Biacore AB) buffer was used as running buffer for all
immobilizations. The measurements are real-time analysis giving
curves named “sensorgrams”. These sensorgrams are a plot of
response (arbitrary units) as a function of time (seconds). One
arbitrary unit (au) increase corresponds to 1 pg/ mm2 increase of
surface density.
(18) McCormick, D. B. J. Heterocycl. Chem. 1 9 7 0 , 7, 447-50.
(19) Wu, F. Y-H.; MacKenzie, R. E.; McCormick, D. B. Biochemistry 1 9 7 0 , 9,
2219-24.
(20) Merril, A. M.; McCormick, D. B. Methods. Enzymol. 1 9 8 0 , 66, 338-44.
(21) Cha, G. S.; Meyerhoff, M. E. Anal. Biochem. 1 9 8 8 , 168, 216-27.
(22) Lin, J.; Welti, D. H.; Arce Vera, F.; Fay, L. B.; Blank, I. J. Agric. Food Chem.
1 9 9 9 , 47, 2813-21.
138 Analytical Chemistry, Vol. 76, No. 1, January 1, 2004