PAPER
Large-Scale Synthesis of a Clostridium difficile Toxin A Binding Trisaccharide
2295
13C NMR (CDCl3): d = 174.2, 165.9, 165.8, 165.5, 165.0, 164.8,
133.3, 133.1, 133.0, 133.0, 132.8, 129.9, 129.8, 129.7, 129.5, 129.4,
129.4, 129.3, 128.6, 128.4, 128.3, 128.2, 128.0, 110.8, 101.1, 100.1,
77.1, 75.4, 73.6, 73.1, 72.9, 72.6, 71.9, 71.3, 70.2, 62.8, 62.6, 51.3,
34.0, 29.2, 28.9, 28.8, 27.4, 26.1, 25.6, 24.8.
HRMS: m/z calcd for C60H64O18 [M + Na]+: 1095.3990; found:
1095.3998.
mol), and anhyd DMF (1.7 kg,). The mixture was stirred for 30 min
at r.t., followed by addition of thiobenzyl 2,3,4,6-tetra-O-benzyl-b-
D-galactopyranoside (2.26 kg, 3.50 mol). The reaction mixture was
stirred for 16–24 h and the progress monitored by TLC (toluene–
EtOAc, 85:15, product Rf 0.44). The mixture was filtered over
Celite (2.0 kg) and the filter pad washed with CH2Cl2 (10 kg). The
filtrate was washed with 5% aq H2SO4 (36.8 kg), and 6% aq
NaHCO3 (38 kg). The organic fraction was evaporated and the
crude product 7 was dried and taken directly to the next step.
8-Methoxycarbonyloctyl-2,3,6,2¢,6¢-penta-O-benzoyl-b-D-lacto-
side (5)
8-Methoxycarbonyloctyl-O-(2,3,4,6-O-benzyl-a-D-galactopyra-
nosyl)-(1→3)-(b-D-galactopyranosyl)-(1→4)-b-D-glucopyrano-
side (8)
Compound 4 (2.40 kg, 2.23 mol) was dissolved in AcOH (18.9 kg)
and H2O (4.5 kg). The resulting mixture was heated to 60 °C until
TLC (toluene–EtOAc–MeOH, 85:15:5, product Rf 0.25) showed
complete consumption of starting material. The mixture was cooled
and diluted with CH2Cl2 (27.0 kg) and H2O (22.5 kg) and the organ-
ic layer was separated. The aqueous layer was back-extracted with
CH2Cl2 (13.0 kg). The combined organic layers were washed with
H2O (36.0 kg), 6% aq NaHCO3 (38 kg) and 5% brine (38 kg). The
organic layer was evaporated to give the desired product 5 (2.3 kg)
in quantitative yield; [a]D20 +33.8 (c = 1.1, CHCl3).
The crude blocked trisaccharide 7 was dissolved in MeOH (20.0 kg)
and 1 N anhyd NaOMe (1.95 kg) was added. The reaction mixture
was stirred at 45 °C until TLC showed complete consumption of the
starting material (CH2Cl2–MeOH, 95:5, product Rf 0.22). Upon
completion, the solution was cooled and neutralized by the addition
of glacial AcOH (0.195 kg) or until a pH 5–7 was achieved. The so-
lution was evaporated and the residue dissolved in EtOAc (22 kg)
and washed with H2O (23 kg) and the organic layer evaporated. The
resulting syrup was triturated with hexanes (2 × 13 kg) and the re-
sidual hexane was removed by evaporation. Crude compound 8 was
purified by flash chromatography (Biotage Flash 400M) sequential-
ly eluted with CH2Cl2 (100 kg), 2 times CH2Cl2–MeOH (99 kg:1.2
kg) and 4 times CH2Cl2–MeOH (99.6:1.8 kg). The fractions con-
taining purified product were pooled together and the solvents re-
moved by evaporation under vacuum to give the product 8 (1.54 kg)
in 72% yield; [a]D20 +30.2 (c = 1.0, CHCl3).
IR (KBr): 3468, 2932, 1727, 1601, 1451, 1271, 1069, 709 cm–1.
1H NMR (CDCl3): d = 7.24–8.16 (m, 25 H, C6H5), 4.60 (2 d, J = 8
Hz each, 2 H, H-1, H-1¢), 3.67 (s, 3 H, CO2CH3), 2.21 (m, 2 H,
CH2CO2), 0.92–1.62 (m, 12 H, CH2).
13C NMR (CDCl3): d = 174.1, 166.2, 165.9, 165.8, 165.0, 133.3,
133.1, 129.8, 129.6, 129.5, 129.5, 129.3, 129.1, 128.5, 128.3, 128.2,
100.9 (C-1, C-1¢, overlap), 77.2, 76.2, 73.5, 73.0, 72.9, 72.6, 72.5,
71.7, 70.1, 68.6, 62.6, 62.0, 51.4, 34.0, 29.2, 28.9, 28.8, 25.6, 24.8.
IR (KBr): 3438, 3030, 1736, 1496, 1079, 735, 697 cm–1.
HRMS: m/z calcd for C57H60O18 [M + Na]+: 1055.3677; found:
1055.3668.
1H NMR (CDCl3): d = 7.20–7.40 (m, 20 H, C6H5), 4.74 (s, 2 H,
CH2C6H5), 4.87 (d, J = 3 H, 1 H, H-1¢¢), 4.45 (d, J = 8 Hz, 1 H, H-
1¢), 4.26 (d, J = 8 Hz, 1 H, H-1), 3.64 (s, 3 H, CO2CH3), 2.27 (t, 2
H, CH2), 1.20–1.64 (m, 12 H, CH2).
8-Methoxycarbonyloctyl-4¢-O-acetyl-2,3,6,2¢,6¢-penta-O-ben-
zoyl-b-D-lactoside (6)
13C NMR (CDCl3): d = 174.2, 138.5, 138.4, 137.8, 128.4, 128.3,
128.3, 128.2, 128.1, 128.1, 127.9, 127.8, 127.6, 127.5, 127.5, 127.3,
104.5 (C-1), 102.8 (C-1¢), 96.0 (C-1¢¢), 79.2, 77.2, 75.7, 75.5, 74.8,
74.5, 74.2, 73.2, 72.5, 70.1, 69.7, 68.5, 66.5, 51.4, 34.0, 29.5, 29.2,
29.2, 29.0, 25.8, 24.8.
HRMS: m/z calcd for C56H74O18 [M + Na]+: 1057.4772; found:
1057.4777.
Compound 5 (2.3 kg, 2.22 mol) was dissolved in THF (23.8 kg).
Triethyl orthoacetate (0.770 kg, 4.75 mol) and camphorsulfonic
acid (59 g, 0.0.22 mol) were added and the reaction mixture was
stirred at r.t. The progress of the reaction was monitored by TLC
(toluene–EtOAc–MeOH, 85:15:5, product Rf 0.71). Upon comple-
tion, 5% aq HCl (23 kg) was added to the mixture and stirred for 1
h. Once TLC confirmed complete conversion to the desired product
(toluene–EtOAc–MeOH, 85:15:5, product Rf 0.40), the mixture
was diluted with CH2Cl2 (45 kg) and extracted. The organic layer
was washed with H2O (36 kg), 6% aq NaHCO3 (36 kg) and H2O (36
kg). The organic layer was evaporated and the resulting residue was
dried under vacuum to furnish compound 6 (2.14 kg) in 86% yield;
[a]D20 +17.0 (c = 1.0, CHCl3).
8-Methoxycarbonyloctyl-O-(a-D-galactopyranosyl)-(1→3)-(b-
D-galactopyranosyl)-(1→4)-b-D-glucopyranoside (1)
To a solution of 8 (1.54 kg, 1.49 mol) in MeOH (22.5 kg) was added
10% Pd/C (0.40 kg). H2 was bubbled through the reaction mixture
until the complete consumption of the starting material was ob-
served by TLC anlysis (CHCl3–MeOH–H2O, 65:35:8, product
Rf 0.39). The solution was filtered through an Alsop cellulose filter
pad (ErtelAlsop, Kingston N.Y.) followed by 0.22 mm filtration.
The filtrate was evaporated and dried to give the crude product. The
residue was dissolved in EtOH (21 kg) at 60 °C and i-PrOH (10.4
kg) added and the resulting solution was stirred and allowed to cool
to r.t. Filtration of the solid and vacuum drying gave 1 (0.721 kg) in
72% yield. The purity of this material was shown to be >95.5% by
HPLC using a YMC polyamine II, 120A, S-5 mm, 4.6 × 250mm col-
umn eluted with MeCN (75%)–(NH4)H2PO4 (25% of 10 mM aq so-
lution) at a flow rate of 1.0 mL/min. The absence of the b-anomer
was shown using the same conditions with MeCN (85)–
(NH4)H2PO4 (15% of 10 mM aq solution) as the mobile phase;
[a]D20 +67.2 (c = 0.9, H2O); mp 187–189 °C.
IR (KBr): 3485, 2934, 1730, 1601, 1451, 1371, 1270, 1070, 710
cm–1.
1H NMR (CDCl3): d = 7.30–8.14 (m, 25 H, C6H5), 4.65 (2 d, J = 8
Hz each, 2 H, H-1, H-1¢), 3.67 (s, 3 H, CO2CH3), 2.22 (m, 2 H,
CH2CO2), 2.02 (s, 3 H, O=CCH3), 0.92–1.58 (m, 12 H, CH2).
13C NMR (CDCl3): d = 174.2, 170.5, 166.3, 165.9, 165.6, 165.3,
165.1, 133.4, 133.3, 133.3, 133.0, 129.9, 129.8, 129.7, 129.6, 129.5,
129.4, 129.4, 128.9, 128.6, 128.5, 128.4, 128.2, 128.1, 101.1, 100.3,
75.6, 73.4, 72.9, 72.7, 71.6, 71.4, 71.1, 70.2, 69.3, 62.6, 51.3, 33.9,
29.2, 28.9, 28.8, 25.6, 24.8, 20.5.
HRMS: m/z calcd for C59H62O19 [M + Na]+: 1097.3783; found:
1097.3777.
8-Methoxycarbonyloctyl-O-(2,3,4,6-O-benzyl-a-D-galactopyra-
nosyl)-(1→3)-(4-O-acetyl-2¢,6¢-di-O-benzoyl-b-D-galactopyra-
nosyl)-(1→4)-2,3,6-tri-O-benzoyl-b-D-glucopyranoside (7)
To a solution of compound 6 (2.24 kg, 2.08 mol) in CH2Cl2 (31.5
kg) were added 4 Å molecular sieves (2.35 kg), CuBr2 (2.6 kg, 11.6
IR (KBr): 3388, 2928, 1737, 1436, 1151, 1075, 803 cm–1.
1H NMR (D2O): d = 5.15 (d, J1¢¢, 2¢¢ = 3.9 Hz, 1 H, H-1¢¢), 4.53 (d,
J
1¢, 2¢ = 7.8 Hz, 1 H, H-1¢), 4.48 (d, J1, 2 = 8.0 Hz, 1 H, H-1), 4.20 (m,
1 H, H-5¢¢), 4.19 (d, J = <1 Hz, 1 H, H-4¢), 4.03 (d, J = 1 Hz, 1 H,
Synthesis 2004, No. 14, 2293–2296 © Thieme Stuttgart · New York