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1
H5 isoxazole). (E/Z)-24 (50%): H-NMR (Z isomer) d
3.12 (s, 3H, SO2CH3), 5.22 (s, 2H, ArCH2), 5.98 (s, 2H,
score which indicates how good the interaction is.
During this search the protein molecule is maintained
rigid, while some torsion angles of the ligand are allowed
to rotate [36,37].
OCH2O), 6.80ꢀ
N), 7.82 and 8.11 (2d, 4H, Jꢁ
(s, 1H, H5 isoxazole). H-NMR (E isomer) d 3.10 (s,
3H, SO2CH3), 4.99 (s, 2H, ArCH2), 5.98 (s, 2H,
/
6.90 (m, 3H, ArCH2), 7.27 (s, 1H, CHÄ
/
/
8.2 Hz, ArSO2), 9.35 ppm
1
The COX2-inhibitor complexes were subsequently
minimised, using MacroModel program [38] to solve
any conflicts due to the rigidity of aminoacids of the site
during docking. The procedure used to refine the
complex involved 100 ps of molecular dynamics with a
constraint of 0,02 kcal on the protein backbone while
the ligand and the residues of the binding site were free.
The simulation temperature was 300 K, the timestep 1.5
fs. the molecular dynamics simulation was followed by a
minimization in which no kind of restraint was applied.
The calculation was performed using AMBER forcefield
with distance dependent electrostatic treatment and
dielectric constant 4.0.
OCH2O), 6.80ꢀ
(2d, 4H, Jꢁ8.2 Hz, ArSO2), 8.05 (s, 1H, CHÄ
ppm (s, 1H, H5 isoxazole). (E/Z)-25 (56%): H-NMR
(Z isomer) d 3.13 (s, 3H, SO2CH3), 7.13ꢀ7.43 (m, 5H,
PhO), 7.53 (s, 1H, CHÄN), 7.87 and 8.15 (2d, 4H, Jꢁ
8.6 Hz, ArSO2), 9.59 ppm (s, 1H, H5 isoxazole). H-
NMR (E isomer) d 3.13 (s, 3H, SO2CH3), 7.13ꢀ7.40 (m,
5H, PhO), 7.84 and 8.12 (2d, 4H, Jꢁ8.6 Hz, ArSO2),
8.37 (s, 1H, CHÄN), 8.93 ppm (s, 1H, H5 isoxazole).
/
6.90 (m, 3H, ArCH2), 7.82 and 8.11
/
/
N), 8.75
1
/
/
/
1
/
/
/
6.2. Biopharmacological methods
6.2.1. Enzyme assays
All compounds 11ꢀ25 were tested following the
/
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