1,2-Benzisoxazole Phosphorodiamidates
J ournal of Medicinal Chemistry, 2003, Vol. 46, No. 25 5435
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supernatant obtained after protein precipitation, as described
above, was injected onto a reverse phase C-18 column (Zorbax
XDB-C18; 75 × 4.6 mm; 3.5 µm particle size) and eluted with
mobile phase consisting of two solvents, (A) 90:10 H2O/
methanol with 10 mM ammonium formate, (B) 10:90 H2O/
methanol with 10 mM ammonium formate. For the first 3 min,
isocratic elution at A/B 80:20 was used; thereafter, a linear
gradient for 15 min from A/B 80:20 to A/B 20:80 was used.
Mobile phase composition was returned to its original value
over the next 5 min and allowed to equilibrate for the next
analysis. The flow rate throughout the gradient was 0.8 mL/
min. For MS analysis, the HPLC effluent was introduced into
a Finnigan ion trap (LCQ) mass spectrometer. Electrospray
positive ionization in the full scan mode from 100 to 600 m/z
was used for detection. The heated capillary temperature was
maintained at 150 °C with a spray voltage at 4.5 kV.
For incubation mixtures of 15, analyses were carried out
by HPLC with UV detection at 254 nm. Chromatography was
performed by injecting a 25 µL sample volume on a reverse
phase C-18 column (Zorbax XDB-C18; 75 × 4.6 mm; 3.5 µm
particle size). Compounds 15 (tR ) 6.2 min) and 16 (tR ) 8.2
min) were separated at a flow rate of 1.0 mL/min with isocratic
elution of with a mobile phase composition of methanol/water
(50:50). The HPLC system consisted of a 501 HPLC pump
(Waters), a Lambda-Max Model 481 LC spectrophotometer
(Waters) detector, D-2500 (Hitachi) integrator, and Model U6K
(Waters) injector.
For inhibition experiments, 50 µL solutions of SKF-525A
in methanol or pCMBA in DMF were added to the microsomal
fraction to give the desired inhibitor concentration in 2 mL of
incubation mixture. The microsomal fractions were preincu-
bated for 30 min with pCMBA and then added with NADPH.
SKF-525A was incubated with microsomes and NADPH for
15 min. Thereafter, oxic samples were added with test
compound, and hypoxic samples were purged with nitrogen
prior to addition of test compound.
Incubations of 15 with P450 reductase microsomes were
carried out at
a protein concentration of 1 mg/mL and
substrate and cofactor concentrations of 0.25 and 0.5 mM,
respectively. Incubations were performed in an identical
fashion as above with rat liver fractions, except that the
duration of incubation at 37 °C was 60 min.
Deter m in a tion of Alk yla tin g Activity in th e In Vitr o
In cu ba tion Mixtu r es by NBP Assa y. Following incubation
with test compound, the rat liver fraction (2 mL) was added
to 2 mL of ice-cold methanol to precipitate proteins. The
mixture was centrifuged and 1 mL of supernatant was used
for alkylating activity test as described earlier.32
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