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M. Krishnamurthy et al. / Bioorg. Med. Chem. 12 (2004) 393–404
4.1.22. N-piperidinyl-1-(cyclohexyl)-5-(4-chlorophenyl)-
4-methyl-1H-pyrazole-3-carboxamide (21). Yield 151 mg
(32.4%) as a white crystalline solid. Rf=0.42 (ethyl
acetate/petroleum ether 1:3), mp: 150 ꢂC. 1H NMR
(500 MHz, CDCl3): d (ppm) 1.15 (m, 2H), 1.38 (m, 2H),
1.59 (m, 2H), 1.69 (p, J=5.5 Hz, 4H), 1.76 (m, 4H), 1.86
(m, 2H), 2.11 (s, 3H), 2.84 (brs, 4H), 3.79 (tt, J=3.5,
11.5 Hz, 1H), 7.11 (d, J=8.5 Hz, 2H), 7.40(d, J=8.5
Hz, 2H), 7.61 (s, 1H); MS: m/z 423.9 (M+23) Anal.
(calcd for C22H29ClN4O) C, H, N (Theoretical: C-
65.90%, H-7.29%, N-13.97% Found: C-65.78%, H-
7.35%, N-13.55).
4.1.27. N-piperidinyl-1- (4-chlorophenyl)-5-(cyclohexyl)-
4-methyl-1H-pyrazole-3-carboxamide (36). Yield 104 mg
(20%) as a white crystalline solid. Rf=0.45 (ethyl acetate/
petroleum ether 1:3), mp: 165 ꢂC. H NMR (500 MHz,
1
CDCl3): d (ppm) 1.19 (m, 3H), 1.41 (m, 2H), 1.73 (m,
11H), 2.46 (s, 3H), 2.57 (tt, J=4.5, 11.5 Hz, 1H), 2.82
(brs, 4H), 7.28 (d, J=8.4 Hz, 2H), 7.48 (d, J=8.5 Hz,
2H), 7.59 (s, 1H); MS: m/z 401.5 (M+1) Anal. (calcd for
C22H29ClN4O) C, H, N (Theoretical: C-65.9%, H-7.29%,
N-13.97% Found: C-65.63%, H-7.18%, N-13.81).
4.1.28. N-piperidinyl-1-(4-chlorophenyl)-5-(cycloheptyl)-
4-methyl-1H-pyrazole-3-carboxamide (37). Yield 84 mg
(25%) as a white crystalline solid. Rf=0.3 (ethyl ace-
tate/petroleum ether 1:4), mp: 175–176 ꢂC. 1H NMR
(500 MHz, CDCl3): d (ppm) 1.32 (m, 4H), 1.46 (m, 4H),
1.68 (m, 8H), 1.79 (m, 2H), 2.35 (s, 3H), 2.65 (tt, J=3.5,
11 Hz, 1H), 2.76 (brs, 4H), 7.22 (d, J=8.5 Hz, 2H), 7.41
(d, J=8.5 Hz, 2H), 7.52 (s, 1H); MS: m/z 415.4 (M+1)
Anal. (calcd for C23H31ClN4O. 0.1H2O) C, H, N (The-
oretical: C-66.28%, H-7.55%, N-13.44% Found: C-
65.9%, H-7.55%, N-13.19).
4.1.23. N-piperidinyl-1- (cycloheptyl)-5-(4-chlorophenyl)-
4-methyl-1H-pyrazole-3-carboxamide (22). Yield 614 mg
(30.8%) as a white crystalline solid. Rf=0.42 (ethyl
acetate–petroleum ether 15:85), mp: 154–155 ꢂC. 1H
NMR (500 MHz, CDCl3): d (ppm) 1.42 (m, 2H), 1.51
(m, 2H), 1.63 (m, 4H), 1.82 (m, 6H), 1.92 (m, 2H), 2.14
(m, 2H), 2.24 (s, 3H), 2.98 (t, J=4.5 Hz, 4H), 4.14 (h,
J=4.5 Hz, 1H), 7.24 (d, J=8.5 Hz, 2H), 7.52 (d, J=8.5
Hz, 2H), 7.75 (s, 1H); MS: m/z 415.5 (M+1) Anal.
(calcd for C23H31ClN4O) C, H, N (Theoretical: C-66.57%,
H-7.53%, N-13.5% Found: C-66.53%, H-7.47%, N-
13.52).
4.1.29. N-piperidinyl-1,5-dicyclohexyl-4-methyl-1H-pyra-
zole-3-carboxamide (39). Yield 55 mg (25%) as a white
crystalline solid. Rf=0.54 (ethyl acetate–petroleum
ether 1:3), mp: 197–198 ꢂC. 1H NMR (500 MHz,
CDCl3): d (ppm) 1.34 (m, 8H), 1.74 (m, 10H), 1.89 (m,
8H), 2.36 (s, 3H), 2.68 (p, J=7.5 Hz, 1H), 2.87 (brs,
4H), 4.02 (tt, J=3.5, 11 Hz, 1H), 7.63 (s, 1H); MS: m/z
373.5 (M+1) Anal. (calcd for C22H36N4O. 0.5H2O) C,
H, N (Theoretical: C-69.25%, H-9.77%, N-14.68%
Found: C-69.12%, H-9.53%, N-14.58).
4.1.24.
N-piperidinyl-1-
(3-methyl-cyclohexyl)-5-(4-
chlorophenyl)-4-methyl-1H-pyrazole-3-carboxamide (23).
Yield 473 mg (42.4%) as a white crystalline solid.
Rf=0.4 (ethyl acetate–hexane 1:3), mp: 151 ꢂC. 1H
NMR (500 MHz, CDCl3): d (ppm) 1.28 (m, 4H), 1.50
(m, 2H), 1.77 (m, 7H), 2.00 (m, 2H), 2.12 (s, 3H), 2.85
(t, J=5.4 Hz, 4H), 4.13 (J=4, 10.5 Hz, 1H), 7.12 (d,
J=8.4 Hz, 2H), 7.39 (d, J=8.7 Hz, 2H), 7.61 (s, 1H);
MS:
m/z
415.4
(M+1)
C23H31ClN4O.0.5H2O) C, H,
Anal.
N
(calcd
for
(Theoretical: C-
4.2. NMR studies and molecular modeling
65.16%, H-7.61%, N-13.21% Found: C-64.97%, H-
7.61%, N-13.16).
All spectra were acquired at 23 ꢂC and 500 MHz on a
Varian Inova-500 spectrometer using a 5-mm HCN tri-
ple resonance probe. Both proton and carbon chemical
shifts were referenced to the residual solvent peak of
DMSO (2.49 ppm for proton and 40ppm for carbon).
For two-dimensional NOESY measurements, a total of
1024 fids were recorded for the indirect dimension, with
a 2 second recycle delay, with a 500 ms mixing time. The
TRIAD NMR package within the Sybyl software was
used for data processing and analysis.34 Peaks in the
NOESY spectra were assigned and integrated using
TRIAD standard functions. MARDIGRAS was then
used to generate distance constraints using these peak
integrals. The resulting constraints were then examined
to ensure that the error in distances conformed to
established errors for NOE constraints wherein; x<2.5
A was Æ0.1 A; xꢃ3.0A was Æ0.2 A; xꢃ3.5 A was
Æ0.3 A; and xꢁ3.5 was Æ0.4 A.
4.1.25. N-piperidinyl-1-(4-methyl-cyclohexyl)-5-(4-chlor-
ophenyl)-4-methyl-1H-pyrazole-3-carboxamide
(24).
Yield 645 mg (47.2%) as a white crystalline solid.
Rf=0.3 (ethyl acetate–hexane 1:4), mp: 171 ꢂC.
1H NMR (500 MHz, CDCl3): d (ppm) 1.55 (m, 4H),
1.76 (m, 9H), 2.17 (m, 2H), 2.18 (s, 3H), 2.92 (t,
J=5.4 Hz, 4H), 3.88 (tt, J=3.0, 11.0 Hz, 1H), 7.18
(d, J=8.4 Hz, 2H), 7.46 (d, J=8.4 Hz, 2H), 7.71
(s, 1H); MS: m/z 415.5 (M+1) Anal. (calcd for
C23H31ClN4O) C, H,
N (Theoretical: C-66.57%,
H-7.53%, N-13.5% Found: C-66.4%, H-7.53%, N-
13.30).
4.1.26. N-piperidinyl-1- (2,4-dichlorophenyl)-5-(4-methyl-
phenyl)-4-methyl-1H-pyrazole-3-carboxamide (27). Yield
613 mg (30.8%) as a white crystalline solid. Rf=0.32
(ethyl acetate–hexane 6:94), mp: 154 ꢂC. 1H NMR
(500 MHz, CDCl3): d (ppm) 1.49 (m, 2H), 1.81 (p, J=6
Hz, 4H), 2.39 (s, 3H), 2.42 (s, 3H), 2.92 (brs, 4H), 7.05
(d, J=8 Hz, 2H), 7.17 (d, J=8 Hz, 2H), 7.32 (m, 2H),
7.48 (dd, J=1, 2 Hz, 1H), 7.69 (s, 1H); MS: m/z 415.5
(M+1) Anal. (calcd for C23H31ClN4O) C, H, N (Theo-
retical: C-62.31%, H-5.46%, N-12.64% Found: C-
62.08%, H-5.51%, N-12.48).
Ten cycles of simulated annealing using the constraints
generated by MARDIGRAS was performed on com-
pounds 21, 24, 27, 36, 39, and AM-251 by heating to
1000 K for 1ps followed by exponential cooling to 200 K
then equilibrating for 5 ps. The experimentally obtained
NOE distance constraints were applied during all steps
of the simulated annealing runs. These averaged con-
formations of unique rotomers were then minimized