Modes of action of XynT and XynA
d, J1,2 4.03, H-1), 5.55 (1 H, dd, H-2), 5.23 (1 H, ddd, J4,5a 3.53,
J4,5b 5.54, H-4), 4.40 (1 H, dd, J5a,5b 12.8, H-5a), 4.11 (1 H, d,
JCH2-a, CH2-b 14.83, ClCH2CO-a), 4.06 (1 H, d, ClCH2CO-b), 3.86
(1 H, dd, H-5b), 2.38 (3 H, 4-Me-MU).
The action patterns of both xylanases were investigated in
20 mM sodium acetate buffer, pH 4.0, at 37 ◦C, using substrate
(MUX2–5) concentrations in the range from 0.8 to 1.2 mM,
the course of the reactions being followed by TLC. To initiate
the reaction, about 0.01 U of the xylanase preparation was
added to the reaction mixture. The reaction was terminated
by freezing and lyophilization. Analysis of MU-containing
hydrolysis products was performed on a Waters Hypersil ODS
column (200 × 4.8 mm) using a linear gradient (0–90%) of
MeCN in water with spectrophotometric detection at 254 nm.
4-Methylumbelliferyl 2,3-di-O-benzoyl-b-D-xylopyranoside 5
A mixture of peracylated glycoside 4 (10 mmol; 4.66 g) and
thiourea (50 mmol; 3.8 g) in MeOH (100 ml) was boiled under
reflux for 6 h. The mixture was concentrated, the residue was
dissolved in CH2Cl2 and subjected to a column chromatography
(9 : 1 → 2 : 1 PhMe–acetone) to give dibenzoate 5 (4.47 g; 87%);
dH (CDCl3): 8.04 (2 H, d, J2,3 8.06, m-OBz), 7.99 (2 H, d, J2,3
7.91, m-OBz), 7.57 (2 H, dd, J3,4 7.48, o-OBz), 7.54 (2 H, dd, J3,4
7.48, o-OBz), 7.48 (1 H, d, J5,6 8.78, H-5 MU), 7.43 (1 H, dd,
p-OBz), 7.40 (1 H, dd, p-OBz), 7.00 (1 H, d, J6,8 2.45, H-8 MU),
6.94 (1 H, dd, H-6-MU), 6.16 (1 H, s, H-3 MU), 5.60 (1 H, dd,
J1,2 5.25, J2,3 7.12, H-2), 5.49 (1 H, d, H-1), 5.40 (1 H, dd, J3,4
6.9, H-3), 4.33 (1 H, dd, J4,5a 4.13, J5a,5b 12.23, H-5a), 4.09 (1 H,
ddd, J4,5b 6.4, H-4), 3.73 (1 H, dd, H-5b), 3.21 (1H, s, OH-4),
2.37 (3 H, s, 4-Me MU).
Determination of kinetic parameters of the hydrolysis of
MU-b-D-xylooligosides by XynT and XynA
The activities of the XynT and XynA in the hydrolysis of
MUX2 and MUX3 were evaluated spectrofluorometrically after
incubating the reaction mixture in 50 mM sodium acetate buffer,
pH 4.0, by measuring the released MU in accordance with ref.
25. The Michaelis constants were determined for each substrate
from the Michaelis-Menten equation by non-linear regression
analysis.31 The rates were determined for at least eight different
substrate concentrations ranging from about 0.1 × the Km value
determined to 4–6 × Km.
4-Methylumbelliferyl 2,3,4-tri-O-acetyl-b-D-xylopyranosyl-
(1→4)-2,3-di-O-benzoyl-b-D-xylopyranoside 6
A solution of ethyl 1-thioxyloside 1 (2 mmol; 640 mg) and the
dibenzoate 5 (1 mmol; 514 mg) in dry CH2Cl2 (25 ml) was
4-Methylumbelliferyl b-D-xylopyranosyl-(1→4)-b-D-
˚
xylopyranoside (MUX2)
stirred with freshly activated MS 4 A (1.5 g) for 1 h, methyl
fluorosulfonate (10 mmol; 1.14 g) was added, and stirring was
continued for 20 h at room temperature. Triethylamine (5 ml)
was added, the mixture was filtered through a layer of Celite
into a mixture of ice–H2O and CH2Cl2. The organic layer was
washed with 10% aq HCl, water, aq NaHCO3, water, dried, and
concentrated. Column chromatography (20 : 1 → 9 : 1 PhMe–
acetone) of the residue gave the protected bioside 6 (613 mg;
79%); dH (CDCl3): 8.06–7.97 (4 H, m, o-OBz), 7.58–7.51 (4 H,
m, m-OBz), 7.47 (1 H, d, J5,6 8.78, H-5-MU), 7.45–7.38 (2 H,
m p-OBz), 6.97 (1 H, d, J6,8 2.45, H-8 MU), 6.91 (1 H, dd, H-6
MU), 6.15 (1 H, m, J3,4-Me 1.44, H-3 MU), 5.66 (1 H, dd, J2,3 6.96,
MU xylobioside was synthesized by the condensation of suit-
ably protected MUX derivative 5, having 4-OH unsubstituted,
with ethyl 2,3,4-tri-O-acetyl-1-thio-b-D-xylopyranoside (1) us-
ing methyl fluorosulfonate as a thiophilic activator (Scheme 2).
Ethyl 2,3,4-tri-O-acetyl-1-thio-b-D-xylopyranoside 1
Compound 1 was prepared by boron trifluoride-catalyzed con-
densation of b-D-xylose peracetate with thiourea as described.17
4-Methylumbelliferyl 4-O-chloroacetyl-b-D-xylopyranoside 3
J3,4 6.76, H-3), 5.50 (1 H, dd, J1,2 5.15, H-2), 5.45 (1 H, d, H-1),
Compound 2 (10 mmol; 3.24 g) and dibutyltin oxide (15 mmol;
3.72 g) were suspended in PriOH (200 ml) and heated under
reflux for 3 h, and the solvent was evaporated. The residue
was dissolved in dry CH2Cl2 (100 ml), cooled to 0 ◦C, and a
solution of ClCH2COCl (11 mmol; 876 ll) in CH2Cl2 (10 ml)
was added dropwise. The mixture was stirred for 1 h at 0 ◦C and
concentrated. Chromatography (toluene : acetone, 9 : 1→1 : 1) of
the residue on a silica gel afforded 3 (2.55 g, 68%); dH(500 MHz,
CD3CN): 7.63 (1 H, d, J5,6 8.8, H-5 MU), 6.99 (1 H, dd, J6,8 2.28,
H-6 MU), 6.97 (1 H, d, H-8 MU), 6.14 (1 H, m, J3,4-Me 1.1, H-3
MU), 5.06 (1 H, d, J1,2 7.24, H-1), 4.85 (1H, ddd, J3,4 9.14, J4,5a
5.35, J4,5b 9.55, H-4), 4.23 (2H, s, ClH2CO), 4.03 (1 H, dd, J5a,5b
11.6, H-5a), 3.91 (0.7 H, s, OH), 3.77 (0.7 H, s, OH), 3.67 (1 H,
dd, J2,3 8.96, H-3), 3.55 (1 H, dd, H-2), 3.52 (1 H, dd, H-5b),
2.38 (3 H, d, 4-Me MU).
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
ꢀ
5.05 (1 H, dd, J2 ,3 7.98, J3 ,4 7.74, H-3 ), 4.86 (1 H, dd, H1 ,2
6.19, H-2ꢀ), 4.68 (1 H, ddd, J4 ,5a 4.75, J4 ,5b 7.87, H-4ꢀ), 4.66 (1
ꢀ
ꢀ
ꢀ
ꢀ
H, d, H-1ꢀ), 4.22 (1 H, dd, J4,5a 4.17, J5a,5b 12.38, H-5a), 4.07 (1
H, ddd, J4,5b 6.65, H-4), 3.79 (1H, dd, J5a ,5b 12.05, H-5aꢀ), 3.71
(1 H, dd, H-5b), 3.20 (1 H, dd, H-5bꢀ), 2.36 (3 H, d, 4-Me MU),
2.04 (3 H, s, OAc), 1.98 (6H, s, OAc).
ꢀ
ꢀ
4-Methylumbelliferyl b-D-xylopyranosyl-(1→4)-b-D-
xylopyranoside (MUX2, 7)
A solution of 6 (500 mg) in dry MeOH (10 ml) was treated with
methanolic NaOMe (100 ll) according to ref. 32 and purified by
reverse-phase chromatography on an INERTSIL PREP-ODS
column (20 × 250 mm) using a linear gradient (0–90%) of MeCN
1
in water to afford the bioside 7. H NMR (D2O) dH 5.12 (1 H,
d, J1,2 7.52, H-1), 4.51 (1 H, d, J1,2 7.84, H-1ꢀ), 4.19 (1 H, dd,
4-Methylumbelliferyl 2,3-di-O-benzoyl-4-O-chloroacetyl-b-D-
xylopyranoside 4
J5a,5b 11.72, J4,5a 5.27, H-5a), 4.01 (1 H, dd, J5a,5b 11.60, J4,5a 5.40,
H-5aꢀ), 3.88 (1H, ddd, J4,6b 10.1, J3,4 8.8, H-4), 3.74 (1 H, t, J2,3
9.4, H-3), 3.66 (1H, ddd, J4,6b 10.3, J3,4 9.2, H-4ꢀ), 3.64 (1H, dd,
H-2), 3.62 (1 H, dd, H-5b), 3.48 (1 H, t, J2,3 9.2, H-3ꢀ), 3.35 (1
H,dd, H-5bꢀ), 3.32 (1 H, dd, H-2ꢀ); 13C NMR (D2O) dC 103.98
(C-1ꢀ), 102.15 (C-1), 78.25 (C-4ꢀ), 77.68 (C-3ꢀ), 75.55 (C-3), 74.82
(C-2ꢀ), 74.57 (C-2), 71.23 (C-4), 67.30 (C-5ꢀ), 65.12 (C-5); ESI+
MS [M + Na]+ m/z 463.1216 calcd. for C20H24NaO11, observed:
463.1209.
Compound 3 (10 mmol; 3.82 g) was dissolved in dry CH2Cl2
(100 ml) containing pyridine (0.1 mol; 8 ml) and cooled to
0 ◦C. Benzoyl chloride (0.03 mol; 3.51 ml) was added dropwise
and stirring was continued overnight at room temperature. The
solution was washed with cold dil HCl, aq NaHCO3, H2O, dried,
and concentrated. Chromatography (toluene : acetone, 20 : 1→4
: 1) of the residue on a column with silica gel gave the peracylated
xyloside 4 (5.84 g, 93%); dH (CDCl3): 8.06 (2 H, dd, J 8.06, m-
OBz), 8.05 (2 H, dd, J 7.9, m-OBz), 7.50 (1 H, d, J5,6 8.78, H-5
MU), 7.46 (2 H, d, J3,4 7.6, o-OBz), 7.43 (2 H, d, J3,4 7.8, o-OBz),
7.24 (1 H, dd, p-OBz), 7.16 (1 H, dd, p-OBz), 7.01 (1 H, d, J6,8
2.45, H-8 MU), 6.95 (1 H, dd, H-6 MU), 6.17 (1 H, m, J3,4-Me
1.44, H-3 MU), 5.64 (1 H, dd, J2,3 5.83, J3,4 5.83, H-3), 5.60 (1 H,
Synthesis of MU b-D-xylooligosides with d.p. 3–6
A solution of MUX2 (80 mM) and appropriate amount of the
b-D-xylosidase corresponding to 8 U were, incubated in 6 mL
of 30 mM sodium phosphate buffer, pH 6.5, for 180 min at
37 ◦C. Following termination of the reaction by freezing and
1 5 0
O r g . B i o m o l . C h e m . , 2 0 0 5 , 3 , 1 4 6 – 1 5 1