Protein Interactions
3-((2-(Undec-10-enamido)ethyl)thio)propoxy 2-acetamido-3,4,6-
tri-O-acetyl-2-deoxy-a-d-galactopyranoside (6): Undec-10-enoic
acid (130.0 mg, 0.71 mmol), HOBt (60.0 mg, 0.44 mmol), DMAP (cat-
alytic amount), TEA (1.0 mL) and DCC (183.0 mg, 0.89 mmol) were
added to a solution of 5 (205.7 mg, 0.44 mmol) in CH2Cl2 (10 mL).
The reaction mixture was stirred at RT for 10 h and then filtered
through a pad of Celite. The collected filtrate was concentrated
under reduced pressure and the residue was dissolved in EtOAc
(100 mL) and subsequently washing with 5% citric acid (ꢂ3), 10%
NaHCO3 (ꢂ3), and brine. The combined organic layers were dried
over anhydrous MgSO4, filtered, and concentrated under reduced
pressure. Compound 6 (245.0 mg, 88%) was obtained as an oil
after flash column chromatography on silica gel using CH2Cl2/
on silica gel using n-hexane/EtOAc 6:4 eluent. Rf =0.43 (n-hexane/
EtOAc 1:1); H NMR (400 MHz, CDCl3, 258C) d=5.88–5.78 (m, 1H),
1
5.45 (t, J=10.2 Hz, 1H), 5.26 (dd, J=17.2, 1.5 Hz, 1H), 5.17 (dd, J=
10.2, 1.5 Hz, 1H), 5.06–4.99 (m, 2H), 4.83 (dd, J=10.2, 3.7 Hz, 1H),
4.20 (dd, J=12.2, 4.4 Hz, 1H), 4.18–4.11 (m, 1H), 4.05–3.96 (m, 3H),
2.05 (s, 3H), 2.03 (s, 3H), 1.97 (s, 3H), 1.95 (s, 3H); 13C NMR
(100 MHz, CDCl3, 258C) d=170.5, 170.0, 170.0, 169.5, 133.0, 118.1,
94.8, 70.7, 70.1, 68.7, 68.5, 67.3, 61.8, 20.6, 20.6, 20.5, 20.5; MS
(FAB): m/z 389.1 [M+1]+.
3-((2-Aminoethyl)thio)propoxy 2,3,4,6-tetra-O-acetyl-2-a-d-glu-
copyranoside (9): 2-Aminoethanethiol hydrochloride (1.46 g,
12.9 mmol) was added to a solution of 8 (1.0 g, 2.6 mmol) in
CH3OH (20 mL). The reaction mixture was irradiated in a photo-
chemical reactor for 5 h under nitrogen and then concentrated
under reduced pressure. Compound 9 (1.15 g, 96%) was obtained
as an oil after flash column chromatography on silica gel using
CH2Cl2/MeOH 9:1 eluent. Rf =0.4 (CH2Cl2/MeOH 17:3); 1H NMR
(400 MHz, CDCl3, 258C) d=5.56 (bs, 2H), 5.39 (t, J=10.1 Hz, 1H),
5.03–4.97 (m, 2H), 4.80 (dd, J=10.1, 3.7 Hz, 1H), 4.20 (dd, J=12.4,
4.4 Hz, 1H), 4.06 (dd, J=12.4, 2.2 Hz, 1H), 3.98–3.94 (m, 1H), 3.77–
3.73 (m, 1H), 3.50–3.47 (m, 1H), 3.08 (t, J=6.6 Hz, 2H), 2.79 (t, J=
6.6 Hz, 2H), 2.61 (t, J=7.0 Hz, 2H), 2.06 (s, 3H), 2.02 (s, 3H), 1.98 (s,
3H), 1.95 (s, 3H), 1.88–1.84 (m, 2H); 13C NMR (100 MHz, CDCl3,
258C) d=170.7, 170.2, 170.2, 169.6, 95.8, 70.8, 70.1, 68.5, 67.3, 66.6,
61.9, 39.6, 30.8, 28.9, 28.1, 20.8, 20.7, 20.7, 20.6; IR (KBr): 3395,
3290, 1752, 1230 cmÀ1; HRMS (FAB) calcd for C19H32NO10S [M+1]+:
466.1747; found: 466.1751.
1
MeOH 98:2 eluent. Rf =0.30 (CH2Cl2/MeOH 95:5); H NMR (400 MHz,
CDCl3, 258C) d=6.45 (d, J=9.2 Hz, 1H), 6.00 (bs, 1H), 5.71 (m, 1H),
5.31 (d, J=2.7 Hz, 1H), 5.12 (dd, J=11.4, 3.2 Hz, 1H), 4.95–4.82 (m,
3H), 4.51 (m, 1H), 4.13–3.97 (m, 3H), 2.65–2.53 (m, 4H), 2.15–2.03
(m, 5H), 2.02–1.75 (m, 13H), 1.60–1.47 (m, 2H), 1.33–1.13 (m, 10H);
13C NMR (100 MHz, CDCl3, 258C) d=173.3, 170.6, 170.4, 170.3,
170.3, 139.0, 114.0, 97.5, 68.1, 67.2, 66.5, 66.3, 61.8, 47.6, 38.5, 36.5,
33.6, 31.3, 29.2, 29.2, 29.2, 29.1, 28.9, 28.7, 28.0, 25.5, 23.0, 20.6,
20.6; IR (neat): 3323, 2919, 2853, 1759, 1646, 1560, 1367, 1241,
1135, 1056 cmÀ1; HRMS (FAB) calcd for C30H51N2O10S [M+1]+:
631.3264; found: 631.3267.
3-((2-(11-(Acetylthio)undecanamido)ethyl)thio)propoxy 2-acet-
amido-3,4,6-tri-O-acetyl-2-deoxy-a-d-galactopyranoside (7): Thi-
olacetic acid (0.40 mL, 5.10 mmol) and azobis(isobutylnitrile;
46 mg, 0.28 mmol) were added to a solution of 6 (550.0 mg,
0.87 mmol) in CH3OH (20 mL). The reaction mixture was irradiated
in a photochemical reactor for 6 h under nitrogen and then con-
centrated under reduced pressure. Compound 7 (499.0 mg, 81%)
was obtained as a yellowish oil after flash column chromatography
on silica gel using CH2Cl2/MeOH 98:2 eluent. Rf =0.33 (CH2Cl2/
3-((2-(11-Mercaptoundecanamido)ethyl)thio)propoxy
2,3,4,6-
tetra-O-acetyl-2-a-d-glucopyranoside (10): 11-Mercaptoundecano-
ic acid N-hydroxysuccinimide ester (271.0 mg, 0.86 mmol) was
added to a solution of 9 (200.0 mg, 0.43 mmol) in CH2Cl2 (10 mL)
and stirred at RT for 10 h. The mixture was then concentrated
under reduced pressure. Compound 10 (190.0 mg, 68%) was ob-
tained as an oil after flash column chromatography on silica gel
1
MeOH 95:5); H NMR (400 MHz, CDCl3, 258C) d=6.62 (d, J=9.2 Hz,
1H), 6.23 (t, J=5.5 Hz, 1H), 5.28 (d, J=1.9 Hz, 1H), 5.05 (dd, J=
11.4, 2.9 Hz, 1H), 4.81 (d, J=3.7 Hz, 1H), 2.80–2.70 (m, 2H), 2.62–
2.48 (m, 4H), 2.19 (s, 3H), 2.13–2.01 (m, 5H), 1.94 (s, 3H), 1.89 (s,
3H), 1.83 (s, 3H), 1.60–1.39 (m, 4H), 1.30–1.08 (m, 12H); 13C NMR
(100 MHz, CDCl3, 258C) d=195.0, 172.5, 169.7, 169.6, 169.5, 97.2,
68.1, 67.2, 66.4, 66.3, 61.9, 47.7, 38.7, 36.6, 31.5, 30.8, 29.6, 29.5,
29.4, 29.4, 29.2, 29.1, 28.9, 28.2, 25.8, 23.2, 20.9, 20.9; IR (neat):
1
using CH2Cl2/EtOAc 5:1 eluent. Rf =0.25 (CH2Cl2/EtOAc 4:1); H NMR
(400 MHz, CDCl3, 258C) d=5.98 (bs, 1H), 5.41 (t, J=9.9 Hz, 1H),
5.04–4.96 (m, 2H), 4.82 (dd, J=3.6, 10.4 Hz, 1H), 4.21 (dd, J=4.7,
12.5 Hz, 1H), 4.06 (dd, J=2.6, 12.6 Hz, 1H), 3.97 (m, 1H), 3.76 (m,
1H), 3.52–3.35 (m, 3H), 2.65–2.54 (m, 4H), 2.51–2.43 (m, 3H), 2.28
(t, J=7.8 Hz, 1H), 2.15 (t, J=7.3 Hz, 2H), 2.05 (s, 3H), 2.04 (s, 3H),
1.99 (s, 3H), 1.97 (s, 3H), 1.90–1.81 (m, 2H), 1.62–11.52 (m, 4H),
1.36–1.20 (m, 12H); 13C NMR (100 MHz, CDCl3, 258C) d=173.4,
170.6, 170.1, 170.1, 169.5, 95.7, 70.7, 70.0, 68.4, 67.2, 66.4, 61.8,
38.3, 36.6, 33.9, 31.5, 29.3, 29.3, 29.2, 29.2, 29.2, 29.2, 29.1, 28.9,
28.9, 28.2, 27.9, 25.6, 24.5, 20.7, 20.6, 20.5; IR (neat): 1752, 1659,
1540, 1447, 1381, 1228, 1049 cmÀ1; MS (FAB): m/z 666.4 [M+1]+.
3323, 2919, 2853, 1759, 1646, 1560, 1367, 1241, 1135, 1056 cmÀ1
;
HRMS (FAB) calcd for C32H55N2O11S2 [M+1]+: 707.3147; found:
707.3142.
2-(3-((2-(11-Mercaptoundecanamido)ethyl)thio)propoxy 2-acet-
amido-2-deoxy-a-d-galactopyranoside (GalNAc-SH): The proce-
dure is similar to the one used to prepare GlcNAc-SH. GalNAc-SH
(56.0 mg, 65%) was obtained as an oil after flash column chroma-
tography on silica gel using CH2Cl2/MeOH 95:5 eluent. Rf =0.33
(CH2Cl2/MeOH 9:1); 1H NMR (400 MHz, CD3OD, 258C) d=4.72 (d,
J=3.7 Hz, 1H), 4.14 (dd, J=11.0, 3.7 Hz, 1H), 3.77 (d, J=3.1 Hz,
1H), 3.75–3.55 (m, 4H), 3.37 (m, 1H), 3.27–3.16 (m, 3H), 2.58–2.48
(m, 4H), 2.38 (t, J=7.2 Hz, 1H), 2.07 (t, J=7.4 Hz, 2H), 1.88 (s, 3H),
1.80–1.70 (m, 2H),1.54–1.44 (m, 4H), 1.32–1.15 (m, 12H); 13C NMR
(400 MHz, CD3OD, 258C) d=176.6, 174.1, 90.1, 72.8, 70.6, 69.9,
67.7, 63.1, 51.9, 40.3, 37.4, 35.5, 32.3, 30.9, 30.8, 30.8, 30.7, 30.6,
30.5, 29.7, 29.5, 27.3, 25.3, 23.0. IR (neat): 3310, 2932, 2846, 1633,
1547, 1129, 1056 cmÀ1; HRMS (FAB) calcd for C24H47N2O7S2 [M+1]+:
539.2825; found: 539.2829.
2-(3-((2-(11-Mercaptoundecanamido)ethyl)thio)propoxy-a-d-glu-
copyranoside (Glc-SH): The procedure for saponification is similar
to the one used to prepare GlcNAc-SH. The product Glc-SH
(58.0 mg, 65%) was obtained as an oil after flash column chroma-
tography on silica gel using CHCl3/MeOH 95: 5 eluent. Rf =0.30
1
(CHCl3/MeOH 9:1); H NMR (400 MHz, CD3OD, 258C) d=4.80 (d, J=
3.6 Hz, 1H), 3.89–3.79 (m, 2H), 3.63–3.51 (m, 4H), 3.44–3.27 (m,
4H), 2.74–2.62 (m, 4H), 2.51 (t, J=6.8 Hz, 2H), 2.21 (t, J=7.3 Hz,
2H), 2.00–1.84 (m, 2H), 1.68–1.56 (m, 4H), 1.45–1.28 (m, 13H);
13C NMR (400 MHz, CD3OD, 258C) d=175.5, 99.9, 75.0, 73.5, 71.7,
67.4, 62.6, 40.3, 37.3, 35.4, 32.3, 30.9, 29.6, 27.3, 25.3; IR (neat):
3409, 2110, 1633, 1016 cmÀ1; MS (FAB): m/z 498.3 [M+1]+:
Allyl 2,3,4,6-tetra-O-acetyl-2-a-d-glucopyranoside (8): The proce-
dure is similar to the one used to prepare 4. Compound 8 (6.24 g,
58%) was obtained as an oil after flash column chromatography
ChemPlusChem 2012, 77, 314 – 322
ꢀ 2012 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim
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