N. Kagermeier et al. / Bioorg. Med. Chem. 23 (2015) 3957–3969
3965
vent was removed under reduced pressure. Purification by column
chromatography (eluent: DCM/MeOH 100:1 to 50:1) yielded 11 as
a white fluffy hygroscopic solid (58.62 mg, 20%): RP-HPLC: 96%,
(tR = 18.80 min, k = 5.38); UVmax 205 nm. 1H NMR (600 MHz,
[D4]MeOH) d (ppm) 1.35 (m, 8H), 1.46–1.66 (m, 4H), 2.03 (tt, 4H,
2J 7.0 Hz, 3J 7.5 Hz), 2.86 (t, 4H, J 7.7 Hz), 3.19 (t, 4H, J 7.0 Hz),
3.39 (t, 4H, J 6.4 Hz), 7.39 (s, 2H), 8.83 (d, 2H, J 0.9 Hz); 13C NMR
J 6.9 Hz), 3.33 (t, 4H, J 6.8 Hz, overlap with solvent). 13C NMR
(75 MHz, [D4]MeOH, trifluoroacetate) (ppm) 11.4, 23.6,
27.4, 29.9, 30.3, 40.6, 41.4, 118.4, 132.6, 155.5, 156.0, 170.3.
HRMS (ESI) m/z (%) 595 (23) [M+H]+, 298 (38) [M+2H]2+; m/z
[M+H]+ calculated for C24H43N12O2S2+: 595.3068, found 595.3068;
d
C24H42N12O2S2 Â 4 TFA (1050.88).
(151 MHz, [D4]MeOH, trifluoroacetate)
d
(ppm) 22.5, 27.8,
4.2.4.8. 1-(Amino{[3-(2-amino-4-methyl-thiazol-5-yl)propyl]amino}
methylene)-3-{7-[3-(amino{[3-(2-amino-4-methyl-thiazol-5-yl)
28.2, 30.2, 30.4, 40.8, 41.5, 117.1, 134.3, 134.9, 155.3, 155.9.
HRMS (ESI) m/z (%) 531 (15) [M+H]+, 266 (47) [M+2H]2+; m/z
[M+H]+ calculated for C24H43N12O+2: 531.3626, found 531.3625;
propyl]amino}methylene)ureido]heptyl}urea (15).
compound was prepared from (175 mg, 0.311 mmol),
(177 mg, 0.652 mmol), NEt3 (215
The title
5
2
C24H42N12O2 Â 4 TFA (986.75).
lL, 1.55 mmol) and HgCl2
(338 mg, 1.24 mmol) according to the general procedure, yielding
15 as a white fluffy hygroscopic solid (95.46 mg, 29%): RP-HPLC:
99%, (tR = 19.85 min, k = 5.74); UVmax 204 nm and 264 nm. 1H
NMR (600 MHz, [D4]MeOH) d (ppm) 1.36 (s, 6H), 1.51–1.57 (m,
4H), 1.90 (tt, 4H, 2J 7.2 Hz, 3J 7.4 Hz), 2.18 (s, 6H), 2.72 (t, 4H, J
7.6 Hz), 3.19 (t, 4H, J 7.1 Hz), 3.33 (t, 4H, J 6.9 Hz); 13C NMR
(151 MHz, [D4]MeOH, trifluoroacetate) d (ppm) 11.4, 23.6, 27.7,
29.9, 30.0, 30.4, 40.8, 41.4, 118.4, 132.7, 155.5, 156.0, 170.3.
HRMS (ESI) m/z (%) 609 (23) [M+H]+, 305 (50) [M+2H]2+; m/z
[M+H]+ calculated for C25H45N12O2S2+: 609.3224, found 609.3226;
C25H44N12O2S2 Â 4 TFA (1064.91).
4.2.4.5. 1-(Amino{[3-(1H-imidazol-4-yl)propyl]amino}methylene)-
3-{10-[3-(amino{[3-(1H-imidazol-4-yl)propyl]amino}methylene)
ureido]decyl}urea (12). The title compound was prepared from 7
(150 mg, 0.248 mmol), amine
1 (191 mg, 0.520 mmol), NEt3
(172 L, 1.24 mmol) and HgCl2 (270 mg, 0.99 mmol) according to
l
the general procedure, yielding 12 as a white fluffy hygroscopic
solid (68.83 mg, 27%): RP-HPLC: 91%, (tR = 22.73 min, k = 6.71);
UVmax 205 nm. 1H NMR (600 MHz, [D4]MeOH) d (ppm) 1.32 (m,
12H), 1.49–1.57 (m, 4H), 2.02 (tt, 4H, 2J 7.0 Hz, 3J 7.6 Hz), 2.83 (t,
4H, J 7.7 Hz), 3.18 (t, 4H, J 7.0 Hz), 4H), 3.36 (t, 4H, J 6.9 Hz), 7.36
(s, 2H), 8.80 (d, 2H, J 0.7 Hz); 13C NMR (151 MHz, [D4]MeOH,
trifluoroacetate) d (ppm) 22.5, 27.8, 28.1, 30.3, 30.4, 30.5, 40.8,
41.4, 117.0, 134.3, 134.9, 155.4, 156.0. HRMS (ESI) m/z (%) 559
4.2.4.9. 1-(Amino{[3-(2-amino-4-methyl-thiazol-5-yl)propyl]amino}
methylene)-3-{8-[3-(amino{[3-(2-amino-4-methyl-thiazol-5-yl)
(10) [M+H]+, 280 (27) [M+2H]2+
C
(1014.80).
;
m/z [M+H]+ calculated for
propyl]amino}methylene)ureido]octyl}urea (16).
compound was prepared from (130 mg, 0.225 mmol),
(128 mg, 0.472 mmol), NEt3 (156
The title
26H47N12O+2: 559.3939, found 559.3935; C26H46N12O2 Â 4 TFA
6
l
2
L, 1.12 mmol) and HgCl2
(244 mg, 0.90 mmol) according to the general procedure, yielding
6 as a white fluffy hygroscopic solid (21.77 mg, 9%): RP-HPLC:
98%, (tR = 21.69 min, k = 6.36); UVmax 204 nm and 264 nm. 1H
NMR (600 MHz, [D4]MeOH) d (ppm) 1.34 (m, 8H), 1.50–1.56 (m,
4H), 1.90 (tt, 4H, 2J 7.0 Hz, 3J 7.4 Hz), 2.18 (s, 6H), 2.72 (t, 4H, J
7.6 Hz), 3.19 (t, 4H, J 7.1 Hz), 3.33 (t, 4H, J 6.9 Hz). 13C NMR
(151 MHz, [D4]MeOH, trifluoroacetate) d (ppm) 11.4, 23.6, 27.8,
29.9, 30.3, 30.4, 40.8, 41.4, 118.4, 132.6, 155.5, 156.0, 170.3.
HRMS (ESI) m/z (%) 623 (11) [M+H]+, 312 (21) [M+2H]2+; m/z
[M+H]+ calculated for C26H47N12O2S2+: 623.3381, found 623.3375;
4.2.4.6. 1-(Amino{[3-(2-amino-4-methyl-thiazol-5-yl)propyl]amino}
methylene)-3-{4-[3-(amino{[3-(2-amino-4-methyl-thiazol-
5-yl)propyl]amino}methylene)ureido]butyl}urea (13). Com-
pound 3 (200 mg, 0.384 mmol) and amine 2 (216 mg, 0.796 mmol)
were dissolved in DCM. NEt3 (265 lL, 1.80 mmol) and HgCl2
(412 mg, 1.52 mmol) were added to the mixture. The mixture
was centrifuged and the precipitate was washed with DCM and
centrifuged for a second time. The solvent was removed under
reduced pressure and the product was purified by column chroma-
tography (eluent: DCM/MeOH 100:1 to 50:1). Yielding 13 as a
white fluffy hygroscopic solid (53.34 mg, 14%): RP-HPLC: 99%,
(tR = 15.61 min, k = 4.29); UVmax 205 nm and 265 nm. 1H NMR
(600 MHz, [D4]MeOH) d (ppm) 1.57 (m, 4H), 1.90 (tt, 4H, 2J
7.0 Hz, 3J 7.3 Hz), 2.18 (s, 6H), 2.72 (t, 4H, J 7.6 Hz), 3.23 (m, 4H),
3.33 (t, 4H, J 6.9 Hz); 13C NMR (151 MHz, [D4]MeOH, trifluoroace-
tate) d (ppm) 11.4, 23.6, 27.7, 29.9, 40.34, 41.4, 118.4, 132.6,
155.6, 156.0, 170.3. HRMS (ESI) m/z (%) 567 (34) [M+H]+, 284
C26H46N12O2S2 Â 4 TFA (1078.94).
4.2.4.10. 1-(Amino{[3-(2-amino-4-methyl-thiazol-5-yl)propyl]amino}
methylene)-3-{10-[3-(amino{[3-(2-amino-4-methyl-thiazol-5-yl)
propyl]amino}methylene)ureido]decyl}urea (17).
compound was prepared from (150 mg, 0.248 mmol),
(141 mg, 0.519 mmol), NEt3 (172
The title
7
l
2
L, 1.24 mmol) and HgCl2
(269 mg, 0.99 mmol) according to the general procedure, yielding
7 as a white fluffy hygroscopic solid (24.25 mg, 9%): RP-HPLC:
99%, (tR = 25.49 min, k = 7.65); UVmax 205 nm and 263 nm. 1H
NMR (600 MHz, [D4]MeOH) d (ppm) 1.32 (m, 12H), 1.50–1.56 (m,
4H), 1.90 (tt, 4H, 2J 7.0 Hz, 3J 7.3 Hz), 2.18 (s, 6H), 2.72 (t, 4H, J
7.1 Hz), 3.19 (t, 4H, J 7.1 Hz), 3.33 (t, 4H, J 6.9 Hz). 13C NMR
(151 MHz, [D4]MeOH, trifluoroacetate) d (ppm) 11.5, 23.6, 27.8,
29.9, 30.3, 30.4, 30.6, 40.8, 41.4, 118.4, 132.7, 155.5, 156.0, 170.3.
HRMS (ESI) m/z (%) 651 (4) [M+H]+, 326 (17) [M+2H]2+, 218 (27)
(58) [M+2H]2+
;
m/z [M+H]+ calculated for C22H39N12O2S+2:
567.2755, found 567.2760; C22H38N12O2S2 Â 4 TFA (1022.83).
4.2.4.7. 1-(Amino{[3-(2-amino-4-methyl-thiazol-5-yl)propyl]amino}
methylene)-3-{6-[3-(amino{[3-(2-amino-4-methyl-thiazol-5-yl)
propyl]amino}methylene)ureido]hexyl}urea (14). Compound 4
(175 mg, 0.319 mmol) and amine 2 (177 mg, 0.652 mmol) were
[M+3H]3+
C
TFA (1106.99).
, ;
163 (42) [M+4H]4+ m/z [M+H]+ calculated for
dissolved in DCM. NEt3 (215 lL, 1.55 mmol) and HgCl2 (378 mg,
28H51N12O2S2+: 651.3694, found 651.3684; C28H50N12O2S2 Â 4
1.24 mmol) were added to the mixture. The mixture was centri-
fuged and the precipitate was washed with DCM and centrifuged
for a second time The solvent was removed under reduced pres-
sure and the product was purified by column chromatography
(eluent: DCM/MeOH 100:1 to 50:1). Yielding 14 as a white fluffy
hygroscopic solid (99.34 mg, 30%): RP-HPLC: 99%, (tR = 18.12 min,
k = 5.15); UVmax 203 nm and 265 nm. 1H NMR (600 MHz,
[D4]MeOH) d (ppm) 1.37 (m, 4H), 1.48–1.62 (m, 4H), 1.89 (tt, 4H,
2J 7.0 Hz, 3J 7.4 Hz), 2.18 (s, 6H), 2.72 (t, 4H, J 7.5 Hz), 3.20 (t, 4H,
4.2.5. 1,7-Dichloroheptan-4-one (18)9
HCl gas (10 fold excess) was passed through dicyclopropyl
ketone (15.00 g, 136.16 mmol) for 30 min. After stirring for 3 h,
HCl gas was passed through the mixture for another 30 min. The
crude product was obtained as a brown oil (24.93 g, 100%) and
was used in the next step without any further purification. 1H