Journal of Medicinal Chemistry
Article
1
.0 mmol), 5-substituted indole (4 mmol), and iodine (0.025 g, 0.1
126.8, 124.9, 124.5, 123.7, 122.2, 121.8, 119.8, 119.2, 119.0, 118.5,
112.8, 112.2, 111.4, 39.8, 39.4. HRMS calcd for C H N Br Na (M +
Na) , 745.0578; found, 745.0595.
mmol) in ether or MeCN (1 mL). This mixture was then stirred for 2
h at room temperature. The reaction mixture was treated with aqueous
Na S O , and the solution was extracted with ethyl acetate (2 × 20
mL). The combined organic layers were dried over MgSO4 and
filtered. The solvent was removed under reduced pressure, and the
residue was subjected to flash column chromatography, followed by
40
28
4
2
+
1,4-Bis(di(5-cyano-1H-indol-3-yl)methyl)benzene (7). Yield
2
2
3
1
45% (powder), mp 154−155 °C. H NMR (500 MHz, acetone-d )
6
11.44 (br s, 4H), 7.79 (s, 4H), 7.51 (d, J = 8.5 Hz, 4H), 7.38 (m, d, J =
7.5 Hz, 4H), 7.32 (s, 4H), 7.12 (s, 4H), 5.99 (s, 2H). 1 C NMR (125
3
normal-phase HPLC to afford the pure product as a powder (91%),
MHz, DMSO-d ) 142.3, 138.7, 128.6, 126.8, 126.7, 125.0, 124.2, 119.5,
6
1
+
mp 165−166 °C. H NMR (400 MHz, CDCl ) 7.34 (d, J = 7.9 Hz,
113.4, 100.8, 38.6. HRMS calcd for C H N Na (M + Na) ,
3
44 26
8
4
(
H), 7.16−7.06 (m, 16H), 7.00 (t, J = 7.4 Hz, 4H), 5.99 (s, 4H), 5.68
689.2178; found, 689.2185.
1,4-Bis(di(5-hydroxy-1H-indol-3-yl)methyl)benzene (8). Yield
s, 2H). 13C NMR (100 MHz, CDCl ) 143.9, 136.5, 129.3, 128.2,
3
1
1
27.0, 126.6, 123.5, 121.7, 120.0, 119.4, 119.0, 111.1, 40.3. HRMS
89% (powder), mp 239−240 °C. H NMR (400 MHz, CD
(s, 4H), 7.13 (d, J = 8.6 Hz, 4H), 6.73 (d, J = 2.3 Hz, 4H), 6.68−6.58
(m, 8H), 5.63 (s, 2H). 13C NMR (100 MHz, CD
OD) 150.1, 143.1,
3
OD) 7.24
+
calcd for C H N (M ), 566.2470; found, 566.2471.
40
30
4
Representative Procedure for the Synthesis of Tetraindole
3
3
: 3,3′,3″,3‴-(2,2′-Oxybis(2,1-phenylene)bis(methanetriyl)-
133.0, 129.0, 128.7, 125.2, 119.1, 112.0, 111.6, 104.4, 41.0. HRMS
+
tetrakis(1H-indole)) (3). A round-bottomed flask (10 mL) was
charged with 2,2′-oxidibenzaldehyde (0.23 g, 1.0 mmol), indole (0.47
g, 4 mmol), and iodine (0.025 g, 0.1 mmol) in ether (1 mL). This
mixture was then stirred for 2 h at room temperature. The reaction
mixture was treated with aqueous Na S O , and the solution was
calcd for C H N O Na (M + Na) , 653.2165; found, 653.2171.
40
30
4
4
1
,4-Bis(di(5-methoxy-1H-indol-3-yl)methyl)benzene (9).
1
Yield 70% (powder), mp 257−258 °C. H NMR (400 MHz,
DMSO-d ) 10.60 (br s, 4H), 7.25 (s, 4H), 7.21 (d, J = 8.6 Hz, 4H),
6.76 (s, 4H), 6.69−6.65 (m, 8H), 5.69 (s, 2H), 3.52 (s, 12H).
NMR (125 MHz, DMSO-d ) 153.1, 142.7, 132.2, 128.5, 127.5, 124.6,
6
1
3
2
2
3
C
extracted with ethyl acetate (2 × 20 mL). The combined organic layers
6
were dried over MgSO and filtered. The solvent was removed under
118.4, 112.5, 111.1, 101.7, 55.6, 39.5. HRMS calcd for C H N O (M
4
44 38
4
4
reduced pressure, and the residue was subjected to flash column
+), 686.2893; found, 686.2876.
chromatography, followed by normal-phase HPLC to afford the pure
Representative Procedure for the Synthesis of Tetraindole
10: 3,3′,3″,3‴-(1,4-Phenylenebis(methanetriyl)tetrakis(1H-
indol-5-amine)) (10). Step 1. A round-bottomed flask (10
mL) was charged with 5-aminoindole (0.66 g, 5.0 mmol),
Fmoc-OSu (2.00 g, 6.5 mmol), and triethylamine (1.0 mL, 7.5
mmol) in dichlormethane (30 mL). This mixture was then
stirred for 5 h at room temperature. The reaction mixture was
treated with dilute HCl solution and extracted with dichloro-
methane (2 × 30 mL). The combined organic layers were dried
1
product as a powder (93%), mp 169−170 °C. H NMR (400 MHz,
CDCl ) 7.28 (d, J = 8.0 Hz, 4H), 7.23 (dd, J = 7.6, 1.6 Hz, 2H), 7.14−
3
7
8
.06 (m, 12H), 7.06−7.01 (m, 2 H), 6.93−6.84 (m, 6H), 6.67 (d, J =
13
.0 Hz, 2H), 6.28 (br s, 4H), 6.06 (s, 2H). C NMR (100 MHz,
CDCl ) 155.5, 136.7, 134.6, 130.2, 127.6, 127.2, 124.1, 123.0, 121.7,
3
1
−
20.2, 119.1, 118.5, 111.3, 34.4, 34.4. HRMS calcd for C H N O (M
46 33 4
−
H) , 657.2655; found, 657.2654.
Representative Procedure for the Synthesis of Tetraindole
: 2,5-Bis(di(1H-indol-3-yl)methyl)thiophene (4). A round-
4
over MgSO and filtered. The solvent was removed under
4
bottomed flask (10 mL) was charged with 2,5-thiophenedicarbox-
aldehyde (0.14 g, 1.0 mmol), indole (0.47 g, 4 mmol), and iodine
reduced pressure, and the residue was subjected to flash column
chromatography to afford the Fmoc-protected 5-aminoindole
(80%).
(
2
0.025 g, 0.1 mmol) in ether (1 mL). This mixture was then stirred for
h at room temperature. The reaction mixture was treated with
aqueous Na S O , and the solution was extracted with ethyl acetate (2
Step 2. A round-bottomed flask (100 mL) was charged with
phthalaldehyde (0.067 g, 0.5 mmol), Fmoc-protected 5-aminoindole
(0.71 g, 2 mmol), and iodine (0.025 g, 0.1 mmol) in MeCN/DMSO
(5 mL). The mixture was then stirred overnight at room temperature.
The reaction mixture was treated with Na S O solution, extracted
2
2
3
×
20 mL). The combined organic layers were dried over MgSO and
4
filtered. The solvent was removed under reduced pressure, and the
residue was subjected to flash column chromatography, followed by
2
2
3
normal-phase HPLC to afford the pure product as a powder (87%),
with dichloromethane (2 × 30 mL). The combined organic layers
1
mp 180−181 °C. H NMR (400 MHz, CDCl ) 7.41 (d, J = 7.8 Hz,
were dried over MgSO and filtered. The solvent was removed under
3
4
4
4
H), 7.38−7.29 (m, 4H), 7.17−7.10 (m, 8H), 7.01 (td, J = 6.8, 1.4 Hz,
reduced pressure, and the residue was subjected to flash column
chromatography to obtain the protected tetraindole 20 (60%).
Step 3. A round-bottomed flask (100 mL) was charged with the
Fmoc protected tetraindole 20 (0.76 g, 0.5 mmol) and DBU (299 μL,
2 mmol) in dichloromethane (50 mL). The mixture was then stirred
for 30 min at room temperature. The reaction mixture was treated
13
H), 6.63 (s, 2 H), 6.37 (m, 4H), 5.95 (s, 2H). C NMR (100 MHz,
CDCl ) 146.5, 136.4, 126.7, 124.4, 123.3, 121.8, 119.8, 119.4, 119.1,
3
+
1
11.2, 35.6. HRMS calcd for C H N S (M ), 572.2035; found,
38 28 4
5
72.2031.
,4-Bis(di(5-bromo-1H-indol-3-yl)methyl)benzene (5). Yield
1
1
7
5% (powder), mp 195−196 °C. H NMR (300 MHz, CDCl ) 8.08
with Na
mL). The combined organic layers were dried over MgSO
4
2
S
2
O
3
solution and extracted with dichloromethane (2 × 30
3
(
br s, 4H), 7.45 (s, 4H), 7.28−7.18 (m, 8H), 7.10 (s, 4 H), 6.40 (s,
and
4
1
H), 5.65 (s, 2H). 13C NMR (75 MHz, CDCl ) 141.2, 135.3, 128.0,
filtered. The solvent was removed under reduced pressure, and the
residue was subjected to flash column chromatography, followed by
3
25.0, 124.6, 122.1, 118.7, 112.8, 112.3, 39.5. HRMS calcd for
−
C H N Br (M − H) , 876.8813; found, 876.8817.
precipitation from DMSO to afford pure product 10 as a powder
40
25
4
4
1
Representative Procedure for the Synthesis of Tetraindole
: 3,3′-((4-Di(1H-indol-3-yl)methyl)phenyl)methylene)bis(5-
(50%), mp 134−135 °C. H NMR (400 MHz, DMSO-d
6
) 10.22 (br s,
6
4H), 7.14 (s, 4H), 7.01 (d, J = 8.5 Hz, 4H), 6.53 (d, J = 2.1 Hz, 4H),
6.47−6.40 (m, 8H), 5.46 (s, 2H), 4.30 (br s, 8H, NH ). C NMR
(125 MHz, DMSO-d ) 142.4, 140.0, 130.6, 127.8, 127.5, 123.4, 117.2,
1
3
bromo-1H-indole) (6). A round-bottomed flask (10 mL) was
charged with 4-(bis(5-bromo-1H-indol-3-yl)methyl)benzaldehyde 21
2
6
+
(
0.25 g, 0.5 mmol), indole (0.12 g, 1 mmol), and iodine (0.012 g, 0.05
111.9, 111.6, 102.8, 39.9. HRMS calcd for C H N (M + H) ,
40
35
8
mmol) in MeCN (1 mL). The mixture was then stirred for 2 h at
room temperature. The reaction mixture was treated with aqueous
Na S O , and the solution was extracted with ethyl acetate (2 × 20
mL). The combined organic layers were dried over MgSO4 and
filtered. The solvent was removed under reduced pressure, and the
residue was subjected to flash column chromatography, followed by
627.2985; found, 627.2988.
1,3-Bis(di(5-hydroxy-1H-indol-3-yl)methyl)benzene (11).
1
2
2
3
Yield 85% (powder), mp 285−286 °C. H NMR (400 MHz,
CD OD) 7.39 (s, 1H), 7.13 (m, 7H), 6.72 (d, J = 2.4 Hz, 4H),
3
1
3
6.64 (dd, J = 8.6, 2.4 Hz, 4H), 6.49 (s, 4H), 5.60 (s, 2H). C NMR
(100 MHz, CD OD) 150.0, 145.3, 132.9, 130.1, 128.6, 128.2, 126.9,
3
normal-phase HPLC to afford the pure product as a powder (80%),
125.2, 118.9, 112.0, 111.6, 104.4, 41.3. HRMS calcd for C H N O
4
0
31
4
4
1
+
mp 210−211 °C. H NMR (400 MHz, CDCl ) 7.59 (br s, 2H), 7.46−
(M + H) , 631.2345; found, 631.2332.
3
7
4
.38 (m, 5H), 7.31−7.22 (m, 5H), 7.19−7.12 (m, 6H), 7.09−7.02 (m,
3,3′,3″,3‴-(1,4-Phenylenebis(methanetriyl)tetrakis(1H-
H), 6.34 (s, 2 H), 6.20 (s, 2 H), 5.78 (s, 1H), 5.59 (s, 1H). 13C NMR
indol-6-ol)) (12). Yield 55% (powder), mp >300 °C. H NMR (400
1
(
100 MHz, CDCl ) 141.7, 140.6, 136.5, 135.0, 128.6, 128.4, 128.3,
MHz, CD OD) 7.22 (s, 4H), 7.05 (d, J = 8.5 Hz, 4H), 6.73 (s, 4H),
3
3
1
589
dx.doi.org/10.1021/jm2013425 | J. Med. Chem. 2012, 55, 1583−1592