Journal of Inclusion Phenomena and Macrocyclic Chemistry
room temperature for 30 min then left to stand in a freezer
at −5 °C for 3 h. The precipitated solid was fltered and
washed with cold acetonitrile to yield L as a white crystal-
line solid (0.32 g, 0.9 mmol, 62%). Recrystallization from hot
acetonitrile yielded white crystals of X-ray quality. 1H NMR
(500 MHz, DMSO-d6): δ 9.14 (2 H, s, HC=N), 8.55 (2 H, d,
J=4.10 Hz, pyH), 8.35 (2 H, t, J=1.27 Hz, pzH), 7.58 (2 H,
td, J=1.57, 7.6 Hz, pyH), 7.18 (2 H, d, J=7.87 Hz, pyH), 7.12
(2 H, ddd, J=0.99, 4.94, 7.44 Hz, pyH), 4.13 (4 H, dt, J=7.26,
1.26 Hz, CH2), 3.24 (4 H, t, J=7.1 Hz, CH2). MS: m/z=345
(M+, 100%). UV/Vis λmax(MeCN) 257 nm (21000 L mol−1
cm−1), 291 nm (22019 L mol−1 cm−1). MP 138 °C (Sample
decomposed at this temperature).
(w), 1437 (m), 1379 (w), 1348 (w), 1327 (w), 1121 (s), 1086
(s), 1035 (s).
[Co3L3](ClO4)6 (C1): 1631 (w), 1608 (m), 1571 (w),
1484 (w), 1446 (m), 1402 (w), 1363 (w), 1317 (m), 1307
(m), 1251 (w), 1191 (m), 1165 (w), 1019 (m), 985 (w), 952
(m), 882 (w), 864 (w), 840 (w), 831 (w), 825 (w), 813 (w),
784 (w), 768 (m), 755 (m), 741 (m), 724 (m), 717 (m), 699
(w), 684 (w).
[Mn3L3](ClO4)6 (C2): 1641 (w), 1608 (m), 1486 (w),
1443 (m), 1403 (w), 1311 (m), 1183 (m), 1017 (m), 959
(m), 844 (m), 768 (m).
X‑ray crystallography
Synthesis of [Co3L3](ClO4)6·6H2O (C1·6H2O)
Single crystal difraction data for ligand L was collected
at 120 K on an Agilent SuperNova difractometer (using
focused microsource Cu Kα radiation, λ = 1.54184 Å)
with an EOS S2 detector. The structures were solved by
direct methods SHELXS and refned using the SHELXL
as implemented in the Olex2 software package [16–18].
multiscan. Hydrogens were calculated at their ideal posi-
tions unless otherwise stated. Single crystal difraction
data for complexes C1 and C2 was collected at 110 K on
the MX2 beamline (λ = 0.7093 Å) at the Australian Syn-
chrotron, Victoria, Australia. The dataset was processed
and evaluated using XDS [19]. The resulting refections
suite [20]. The structures were solved by direct methods
in the Olex2 software package [16–18]. Absorption data
non-H atoms were refned with anisotropic thermal param-
eters. All H atoms were inserted at calculated positions
and rode on the C atoms to which they were attached.
TwinRotMat indicated the presence of a non-merohedral
twin law (− 1 0 0, 0 − 1 0, 0.666 0 1) which was duly
applied to the data for L, resulting in 2% improvement in
R1, BASF=10.8%. Positional disorder was present in both
complexes. In both cases, one of the pyridine arms is posi-
tional disordered in a 50:50 ratio. In addition, one of the
perchlorate anions is rotational disordered in a 45:55 ratio
(C1), and 47:53 (C2). In both structures, one of the cavi-
ties is shared by one perchlorate anion 50% of the time and
residue water solvent over two (C1) and four (C2) sites.
Remaining difuse solvent in C1 and C2 was treated with
SQUEEZE [21] as implemented in the Olex2 software
package. A total of 674 and 873 electrons were removed
per unit volume (or 56 and 73 electrons per asymmetric
unit) for the complexes C1 and C2 respectively. These
approximated to 1.333 molecules of water and two mol-
ecules of CH3CN per asymmetric unit for C1 with Z = 12
A solution of Co(ClO4)2·6H2O (0.14 g, 0.39 mmol) in 3 mL
acetonitrile was added to a solution of L (0.13 g, 0.39 mmol)
in 30 mL acetonitrile producing a orange solution. The mix-
ture was stirred for 30 min then concentrated in vacuo to give
orange crystals. Vapour difusion of diethyl ether into a con-
centrated solution of [Co3L](ClO4)6 in acetonitrile yielded
more orange crystalline material. The product was fltered
then recrystallized by vapour difusion of diethyl ether into a
concentrated solution of [Co3L3](ClO4)6 in acetonitrile to yield
orange crystals of X-ray quality (0.10 g, 0.13 mmol, 39%).
Elemental analysis calcd for [Co3L3](ClO4)6·6H2O: C 37.63,
H 3.79, N 13.17%. Found: C 37.69, H 3.34, N 13.02%. UV/Vis
λmax(MeCN) 240 nm (50195 L mol−1 cm−1), 326 nm (33512
L mol−1 cm−1), 406 nm (8305 L mol−1 cm−1). Conductivity
of [Co3L3](ClO4)6 in CH3CN=0.416 mS cm−1, 419.01 S cm2
mol−1.
Synthesis of [Mn3L3](ClO4)6·8H2O (C2·8H2O)
A solution of Mn(ClO4)2·6H2O (0.13 g, 0.35 mmol) in 10 mL
acetonitrile was added to a solution of L (0.12 g, 0.35 mmol)
in 20 mL acetonitrile producing a dark red coloured solution.
The mixture was stirred for 30 min then concentrated in vacuo.
Vapour difusion of diethyl ether into a concentrated solution
of [Mn3L3](ClO4)6 in acetonitrile yielded dark red crystals of
X-ray quality (0.03 g, 0.12 mmol, 15%). Elemental analysis
calcd for [Mn3L3](ClO4)6·8H2O: C 37.17, H 3.95, N 13.00%.
Found: C 37.59, H 3.58, N 13.25%. UV/Vis λmax(MeCN)
248 nm (41565 L mol−1 cm−1), 306 nm (38730 L mol−1 cm−1),
400 nm (weakly absorbing shoulder). Conductivity of [Mn3L3]
(ClO4)6 in CH3CN=0.320 mS cm−1, 554.76 S cm−2 mol−1.
The characteristic FTIR bands (cm−1) of ligand L
and complexes C1 and C2
N,N′-(pyrazine-2,5-diylbis(methanylylidene))bis(2-(pyridin-
2-yl)ethanamine) (L): 1642 (m), 1590 (m), 1571 (m), 1477
1 3