6144 J. Am. Chem. Soc., Vol. 122, No. 26, 2000
Cardona et al.
(sb, NH, 1H); 7.2-8.4 (m, C10H6, 6H); 12.0 (bs, OH, 3H). 13C NMR
(DMSO-d6): 27.59, 30.33 (CH2CH2); 45.01 (CH3); 60.45 (C(CH2-
CH2)3); 114.85, 119.06, 123.50, 127.63, 127.839, 128.77, 128.96,
129.35, 138.63, 151.34 (C10H6); 173.85 (COOH). UV-vis [λmax, nm
(ꢀ, M-1 cm-1), phosphate buffer pH 7]: 3295 (4.33 × 103). MALDI-
TOF MS: 479.926 (M+, calcd 480.53).
EtOAc). Hydrolysis of the obtained white foam in 96% formic acid
procured a white powder in 95% yield. FT-IR (KBr): 3300-2500
(ν(OH)) cm-1; 3339 (ν(N-H)) cm-1; 1721 (ν(CdO)) cm-1; 1657
(ν(AMIDE I, CdO)) cm-1; 1539 (ν(AMIDE I, N-H)) cm-1; 1295
1
(ν(CdO)) cm-1; 1201 (ν(O-H)) cm-1. H NMR (DMSO-d6): 2.03
(m, CH2CH2, 12H); 1.75-2.12 (m, CH2CH2, 36H); 7.30 (bs, NH, 3H);
12.0 (bs, OH, 9H). 13C NMR (DMSO-d6): 28.00, 29.04 (CH2CH2);
30.06, 31.10 (CH2CH2); 56.39 (C(CH2CH2)3); 93.27 (O2NC); 170.37
(CONH); 174.32 (COOH). MALDI-TOF MS: 966.137 (M+, calcd
964.93); 989.251 (M + Na+); 1005.63 (M + K+); 915.921 (M - NO2).
Reagents for Photophysical Studies. DA (99%, Aldrich Chemical
Co.), Na2HPO4‚7H2O and NaH2PO4‚H2O (J. T. Baker, Inc.), 1,4-bis-
(4-methyl-5-phenyl-2-oxazolyl)benzene (Me2POPOP, Aldrich Chemical
Co.), ethanol (dehydrated, 200 proof, Pharmco), â-CD (Sigma Chemical
Co.), and polyclonal anti-dansyl antibody (rabbit IgG fraction, Molecular
Probes, Inc.) were used as received. All aqueous buffer solutions were
prepared from doubly distilled-deionized water (Millipore) and stock
solutions were refrigerated in the dark at 4 ( 2 °C.
9 Cascade:Dansyl[1]:(3-Oxo-2-azapropylidyne):(3-Oxo-2-azap-
entylidyne):Propanoic (2). As described above, dansyl chloride (0.266
g, 0.99 mmol) was stirred with the second generation amine building
block (1.00 g, 0.69 mmol) in dry acetonitrile over K2CO3 anhydrous
(0.26 g, 1.9 mmol) under N2. After filtration and removal of the solvent,
the residue was purified by column chromatography, eluting with CH2-
Cl2, followed by 5:1 CH2Cl2/EtOAc and finally 2:1 CH2Cl2/EtOAc.
The recovered product (0.530 g, 46%), a pale green foam, was
hydrolyzed as described above to procure a pale yellow powder in 95%
yield after complete removal of the formic acid. FT-IR (KBr): 3300-
2500 (ν(OH)) cm-1; 3348 (ν(NH)) cm-1; 1715 (ν(CdO)) cm-1; 1643
(ν(AMIDE I, CdO)) cm-1; 1549 (ν(AMIDE II, N-H)) cm-1; 1300
1
(ν(CdO)) cm-1; 1208 (ν(H-O)) cm-1. H NMR (DMSO-d6): 1.62-
Instrumentation. 1H and 13C NMR spectra were recorded on a
Varian VXR-400 spectrometer; all the chemical shift (δ) values are
reported in ppm. Electronic absorption spectra were obtained in either
a Shimadzu model 2101 or a Milton-Roy model 1201, equipped with
a temperature-controlled cell holder that was maintained at 25 °C. FAB-
MS data were recorded with a VG-Trio mass spectrometer. MALDI-
TOF MS spectra were recorded at the LSU Mass Spectroscopy Facility.
Fluorescence experiments were performed with an SLM-AMINCO
model 48000 MHF. For all steady-state fluorescence measurements, a
450 W xenon arc lamp was used as the excitation source with single
grating monochromators serving as the wavelength selection devices.
The excitation and emission spectral band-passes were kept at 8 nm,
and all emission spectra were background-corrected using appropriate
blanks. The time-resolved fluorescence anisotropy and intensity decay
kinetics were measured in the frequency domain12-16 using the same
instrument. For these particular experiments, a CW argon-ion laser
(Coherent, Innova 90-6) operating at 351.1 nm was the excitation
source. An interference filter (Oriel) was placed in the excitation beam
path to minimize extraneous plasma tube superradiance from reaching
the detection system. The sample fluorescence was monitored in the
typical L-format after passing through a 420 nm long-pass filter and a
Glan-Thompson calcite polarizer. The Pockels cell modulator was
operated at a 5 MHz base repetition rate. Typically, data were acquired
for 60 s between 5 and 200 MHz (40 total frequencies), and at least 10
discrete multifrequency data sets were acquired for each sample. For
the excited-state intensity decay measurements, we used a dilute solution
of Me2POPOP dissolved in ethanol as the reference lifetime standard;
its lifetime was assigned a value of 1.45 ns.12 Magic angle polarization
conditions were used for all excited-state intensity decay measurements
to eliminate bias arising from fluorophore rotational reorientation. The
excited-state fluorescence lifetimes and rotational reorientation times
were recovered from the frequency-domain data by using a com-
mercially available nonlinear least-squares software package (Globals
Unlimited). The actual imprecision in each datum was used as a
weighting factor. Unless otherwise specified, all spectroscopic measure-
ments were carried out at 22 ( 2 °C in 0.1 M pH 7.0 phosphate buffer.
For the dynamic experiments, the samples were subjected to four
freeze-pump-thaw cycles to remove residual oxygen.
1.92 (m, CH2CH2, 12H) gen 1; 1.82-2.12 (m, CH2CH2, 36H) gen 2;
2.86 (s, CH3, 6H); 7.11 (sb, NH, 3H) gen 2; 7.73 (sb, NH, 1H) gen 1;
7.2-8.4 (m, C10H6, 6H); 12.2 (bs, OH, 9H). 13C NMR (DMSO-d6):
28.16, 29.13 (CH2CH2) gen 2; 30.32, 32.42 (CH2CH2) gen 1; 45.03
(CH3); 56.22 (C(CH2CH2)3) gen 2; 60.95 (C(CH2CH2)3) gen 1; 114.81,
119.40, 123.46, 127.30, 127.68, 128.84, 128.03, 129.13, 139.43, 151.31
(C10H6); 171.71 (CONH); 174.53 (COOH). UV-vis [λmax, nm (ꢀ, M-1
cm-1), phosphate buffer pH 7]: 329 (3.80 × 103). MALDI-TOF MS:
1168.02 (M+, calcd 1168.23); 920.311 (M - H3N+C(CH2CH2COOH)3).
(27 Cascade:Dansyl[1]:(3-Oxo-2-azapropylidyne):(3-Oxo-2-aza-
pentylidyne):(3-Oxo-2-azapentylidyne):Propanoic (3). Following the
procedure described above, dansyl chloride (0.033 g, 0.12 mmol) and
the third generation amine building block (0.50 g, 0.11 mmol) were
stirred in a suspension of K2CO3 anhydrous in dry CH3CN under N2.
The residue obtained after filtration and solvent evaporation was purified
by column chromatography (SiO2, 5:1 CH2Cl2/EtOAc followed by
EtOAC). A very pale green, almost white foam was recovered (0.263
g, 50%), which upon hydrolysis gave a white-green powder (95%).
FT-IR (KBr): 3300-2500 (ν(OH)) cm-1; 3339 (ν(NH)) cm-1; 1717
(ν(CdO)) cm-1; 1652 (ν(AMIDE I, CdO)) cm-1; 1542 (ν(AMIDE II,
1
N-H)) cm-1; 1291 (ν(CdO)) cm-1; 1203 (ν(O-H)) cm-1. H NMR
(DMSO-d6): 1.7-2.2 (m, CH2CH2, 156H) gen 1, 2, and 3; 2.80 (s,
CH3, 6H); 7.24 (sb, NH, 9H) gen 3; 6.9-8.5 (m, C10H6, 6H & NH
gen1 and 2, 4H); 12.1 (bs, OH, 27H). 13C NMR (DMSO-d6): 28.10,
29.07 (CH2CH2) gen 3; 30.26, 30.90 (CH2CH2) gen 2; 44.99 (CH3);
56.31 (C(CH2CH2)3) gen 3; 172.26 (CONH) gen 3; 174.48 (COOH).
UV-vis [λmax, nm (ꢀ, M-1 cm-1), phosphate buffer pH 7]: 324 (3.31
× 103). MALDI-TOF MS: 3230.69 (M+, calcd 3231.33); 2993.08 (M
- DansylH+).
3 Cascade:Nitro[1]:(3-Oxo-2-azapropylidyne):Propanoic (4). The
nitrotriester (4.55 g, 10.2 mmol), precursor of Behera’s amine, was
hydrolyzed by stirring it in 10 mL of 96% formic acid for 15 h at 23
°C. After complete removal of the formic acid at reduced pressure and
100 °C, a white powder was obtained (2.75 g, 97%). FT-IR (KBr):
3300-2500 (ν(OH)) cm-1; 1715 (ν(CdO)) cm-1; 1532 (ν(NdO))
cm-1; 1295 (ν(CdO)) cm-1. 1H NMR (DMSO-d6): 2.1-2.2 (m, CH2-
CH2, 12H); 12.3 (bs, OH, 3H). 13C NMR (DMSO-d6): 28.16, 29.73
(CH2CH2); 92.77 (O2NC); 173.04 (COOH). FAB+ MS: 277 (M+, calcd
277.23); 278 (M + 1).
Acknowledgment. The authors are grateful to the NSF for
the support of this research work (to A.E.K.,
CHE-9982014; to F.V.B., CHE-9626636). F.V.B. is also grateful
for support from the DOE (DEFG0290ER14143) and ONR
(N000149610501 and N0001497100773). C.M.C. acknowledges
a minority predoctoral fellowship from NIH.
9 Cascade:Nitro[1]:(3-Oxo-2-azapropylidyne):(3-Oxo-2-azapen-
tylidyne):Propanoic (5). The triacid made as described above (2.5 g,
9.0 mmol) was coupled to Behera’s amine (11.2 g, 27.0 mmol) in the
presence of DCC (5.6 g, 27.1 mmol) and HOBT (1.23 g, 9.1 mmol).
The mixture was stirred in 100 mL of dry THF for 6 days at 23 °C
under N2. The product was filtered, and after evaporation of the solvent,
the residue was purified by column chromatography (2:1 CH2Cl2/
JA000949L