Inorganic Chemistry
Article
demonstrate that 31P DOSY NMR is a powerful technique to
determine in situ the presence of reaction intermediates (I1A,
I1B, I2, and I5) and products (ADP, AMP, P) formed during
ASSOCIATED CONTENT
Supporting Information
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*
S
3
1
the course of ATP hydrolysis. In addition, P EXSY NMR has
been proven to be a very useful technique to identify the
presence of slow exchange between the intermediates and the
reaction products (ATP, I1A and I1B; ADP, I2; PP, I5) and to
follow the reaction pathway. The assignment of all species that
occurred during ATP hydrolysis promoted by this POM
allowed calculation of the rate constants. The present study
31P,
31P DOSY, and 31P EXSY NMR spectra, the
interaction between ADP/AMP/P/PP and ZrK 2:2, the
interaction between the substrates structurally related to
ATP and ZrK 2:2, and ln[ATP] as a function of time
IV
further demonstrates the potential of Zr -substituted POMs as
15,21,22,29
artificial phosphatases
and contributes to the further
development of POMs as Lewis acid catalysts for the hydrolysis
AUTHOR INFORMATION
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3
8−40
of biomolecules.
Understanding the detailed mechanism in
this study encourages us to further exploit the hydrolytic
activity of this POM toward biologically active molecules such
as DNA/RNA fragments, pesticides (paraoxon, parathion), and
nerve agents (soman, sarin).
Author Contributions
The manuscript was written through contributions of all
authors. All authors have given approval to the final version of
the manuscript.
EXPERIMENTAL SECTION
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IV
Materials. The binuclear Zr -substituted Keggin POMs
4
1,42
(
Et NH ) [{α-PW O Zr(μ-OH)(H O)} ]·7H O
(ZrK 2:2)
2
2
8
11 39
2
2
2
Notes
4
3
and (Et NH ) [Zr(PW O ) ]·7H O (ZrK 1:2) were synthesized
2
2
10
11 39
2
2
The authors declare no competing financial interest.
as described in the literature. Adenosine triphosphate (ATP),
adenosine diphosphate (ADP), adenosine monophosphate (AMP),
ACKNOWLEDGMENTS
sodium pyrophosphate (PP), Na HPO4 (P), ribose phosphate,
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2
adenine, adenosine, DCl, and NaOD were purchased from Acros
and used without any further purification.
Sample Preparation. Solutions containing 20.0 mM of each
compound ATP, ADP, AMP, PP, and Na HPO and 3.0 mM of ZrK
T.N.P.-V. and P.S. (BOF + fellowship) thank KU Leuven for
financial support. T.K.N.L. thanks the Vietnamese Government
and KU Leuven for a doctoral fellowship. G.A. thanks FWO
Flanders for a postdoctoral fellowship. The authors acknowl-
edge the CMST COST Action CM1203 (Polyoxometalate
Chemistry for Molecular Nanoscience) for financial support in
terms of STSM applications.
2
4
2
:2 were prepared in D O for the interaction study. An additional
2
solution containing 3.0 mM ATP and 3.0 mM ZrK 2:2 was prepared in
D O for the kinetic study. The final pD of the solution was adjusted
2
with minor amounts of concentrated DCl (10%) and NaOD (15%).
The pH meter value was corrected by using the equation: pD = (pH
44
meter reading) + 0.41.
REFERENCES
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NMR Measurements. 31P 1D NMR spectra were recorded on a
Bruker Avance 400 spectrometer. Trimethyl phosphate was used as
the 31P chemical shift external reference. The P DOSY and EXSY
spectra were measured on a Bruker Avance II+ 600 NMR
spectrometer using a 5 mm direct detection dual broad band probe,
with a gradient coil delivering a maximum gradient strength of 53 G/
cm. All experiments were performed at a temperature of 298 K. The
(
1) Bazzicalupi, C.; Bencini, A.; Bianchi, A.; Danesi, A.; Giorgi, C.;
Lodeiro, C.; Pina, F.; Santarelli, S.; Valtancoli, B. Chem. Commun.
31
2
005, 2630.
(2) Massoud, S. S.; Milburn, R. M. J. Inorg. Biochem. 1990, 39, 337.
(3) Guo, Y.; Ge, Q.; Lin, H.; Lin, H. K.; Zhu, S.; Zhou, C. Biophys.
Chem. 2003, 105, 119.
(4) Manyanga, A. S.; Sithole, A. Nucleic acids structure & function for
2
D EXSY spectra were recorded with the Bruker program noesygpph.
generalbiochemistry, biology and biotechnology; Science Math Zone:
The spectra were recorded with a spectral width of 25000 Hz, 2 K data
points in the t2 time domain and 256 t1 increments with 64 transients
each, and a relaxation delay of 3 s. The spectra were recorded for each
sample with two different mixing times of 300 and 400 ms. A sine
window function (ssb = 2) and zero-filling were applied in both
dimensions prior to Fourier transformation, to give a 4K × 4K data
matrix in the frequency domain. The P DOSY spectra were
measured using a stimulated echo based pulse sequence, with bipolar
sine shaped gradient pulses. The spectra were acquired with 64K time
domain data points in the t2 dimension, 32 gradient strength
increments, a diffusion delay of 200 ms, a total gradient pulse length of
Boston, 2014; p 48.
(
(
5) Edmunds, T.; Goldberg, A. L. J. Cell. Biochem. 1986, 32, 187.
6) Ge, R.; Lin, H.; Xu, X.; Sun, X.; Lin, H.; Zhu, S.; Ji, B.; Li, F.; Wu,
H. J. Inorg. Biochem. 2004, 98, 917.
7) Imamura, T.; Hinton, D. M.; Belford, R. L.; Gumport, R. I.;
Haight, G. P., Jr J. Inorg. Biochem. 1979, 11, 241.
(
31
(
8) Millan
́
, J. L. Purinergic Signalling 2006, 2, 335.
(9) Nayudu, R. V.; de Meis, L. FEBS Lett. 1989, 255, 163.
(10) Spencer, A. G. The Scientific Basis of Medicine: Annual Reviews
University of London; Athlone Press, 1964; p 337.
(11) Hegg, E. L.; Burstyn, J. N. Coord. Chem. Rev. 1998, 173, 133.
(12) Kitamura, Y.; Komiyama, M. Nucleic Acids Res. 2002, 30, 102e.
(13) Fang, Y.-G.; Zhang, J.; Chen, S.-Y.; Jiang, N.; Lin, H.-H.; Zhang,
Y.; Yu, X.-Q. Bioorg. Med. Chem. 2007, 15, 696.
(14) Thomas, D. T. In Metal-DNA Chemistry; American Chemical
Society: Washington, DC, 1989; Vol. 402, p 1.
(15) Vanhaecht, S.; Absillis, G.; Parac-Vogt, T. N. Dalton Transactions
2012, 41, 10028.
7
ms, 128 transients for each gradient step, and a relaxation delay of 6
ms. The gradient strength was incremented from 2 to 80% of the
maximum gradient output (from 0.68 to 27.25 G/cm). The spectra
were processed with an exponential window function (line broadening
factor 5), 64K data points in F2, and 258 data points in the diffusion
dimension. The evaluation of the diffusion coefficients was performed
by fitting the diffusion profile (the normalized signal intensity as a
function of the gradient strength G) at the chemical shift of each signal
in the DOSY spectrum with an exponential function using a variant of
the Stejskal−Tanner equation adapted to the particular pulse sequence
used.
(16) Schneider, P. W.; Brintzinger, H. Helv. Chim. Acta 1964, 47,
1717.
(17) Hediger, M.; Milburn, R. M. J. Inorg. Biochem. 1982, 16, 165.
(18) Wilcox, D. E. Chem. Rev. 1996, 96, 2435.
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