130322-65-5Relevant academic research and scientific papers
Substrate structure governs maximum rate of catalysis exerted by cyclodextrin oxidase chemzymes
Bjerre, Jeannette,Bols, Mikael
, p. 417 - 423 (2011)
Selectively modified α-and β-cyclodextrin ketones or aldehydes act as artificial oxidases on a variety of small lipophilic substrates. The structure of the substrate is a highly important factor governing how effectively the oxidation reaction can be catalyzed. Amino acid-type substrates were not prone to catalysis, which yields new information about the limits of CD catalysis. Aniline showed some non-quantifiable catalysis, but for quinones and benzyl alcohols no net catalysis was detected. For aminophenol oxidation, o-aminophenols are far better substrates than p-aminophenols. The CD-catalyzed reaction follows Michaelis-Menten kinetics, involves CD cavity binding of the substrate and substrate recognition, and thus encompasses many of the hallmarks of natural enzymatic catalysis. Strong binding of the cooxidant H 2O2 to the CD catalytic carbonyl group is a prerequisite for the subsequent oxidation of the substrate and in accordance with this, the binding of H2O2 to β-CD dialdehyde was shown to be strong (Kd = 1.4 mM). β-CD 6A,6D-diketone which binds H2O2 weaker than an aldehyde was accordingly a less efficient oxidase. The wide range of substrates applicable to CD chemzyme catalysis brings about optimism for future scopes of synthetic biology.
Hexaphyrin-cyclodextrin hybrids: Getting larger, getting confused
Robert, Fran?ois,Boitrel, Bernard,Ménand, Micka?l,Le Gac, Stéphane
, p. 1022 - 1032 (2021/08/30)
The diversity of hexaphyrin-cyclodextrin hybrids (HCD), previously formed from the covalent assembly of regular hexaphyrin and α-cyclodextrin subunits, has been increased following two main directions: enlarging the confined space provided by the cyclodextrin and tuning the N-core of the hexaphyrin aiming at bimetallic complexes. The larger β-cyclodextrin unit was selectively functionalized with aldehyde linkers on its primary rim which were further reacted with 2 eq. of pentafluorophenyl tripyrrane in acidic conditions, followed by DDQ oxidation. Doubly-linked HCD hybrids were obtained with structural variations in the hexaphyrin macrocycles depending on the MSA concentration (2 vs. 200 mM) producing either regular ([26] rectangular/[28] M?bius) or doubly N-confused dioxo ([26] rectangular) scaffolds. For the latter, two isomers were isolated featuring mirror transoid skeletons and long-side meso-linking patterns, giving rise to planar chirality at the origin of intense and opposite electronic circular dichroism (ECD) spectra. Zn(II) complexation was then investigated leading to two main findings. (i) The regular [28] M?bius HCD afforded a mixture of monometallic M?bius Zn(II) complexes in the presence of acac ligand. ECD spectroscopy indicated a chirality transfer from the β-cyclodextrin favoring a P M?bius twist, but opposite to that arising from the narrower α-cyclodextrin congener (M twist favored). (ii) Owing to N3O coordination boxes, dissymmetric bimetallic Zn(II) complexes were readily formed with the doubly N-confused dioxo HCDs through a positive cooperative process. Both metal centers bind a DMAP ligand in axial positions, which is of interest for the
CAPPED CYCLODEXTRIN-HYDROPHOBIC MOIETY CONJUGATE, CYCLODEXTRIN SUPRAMOLECULAR POLYMER, AND CYCLODEXTRIN-siRNA COMPLEX AND METHOD OF SYNTHESIS THEREOF
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Paragraph 0120; 0122-0126, (2020/01/24)
The invention relates to a capped cyclodextrin-hydrophobic moiety conjugate, to a supramolecular polymer formed of capped cyclodextrin-hydrophobic moiety conjugates according to the invention and to a siRNA-cyclodextrin complex comprising a supramolecular polymer according to the invention. The invention also relates to a method for manufacturing the capped cyclodextrin-hydrophobic moiety conjugate, the supramolecular polymer, the siRNA-cyclodextrin complex according to the invention. The capped cyclodextrin-hydrophobic moiety conjugate of the invention comprises a capped cyclodextrin group and at least one hydrophobic moiety bound by a first linker to one of the carbon atoms of the cap. The invention can be used for various applications in particular in the pharmaceutical field.
Direct and Regioselective Di-α-fucosylation on the Secondary Rim of β-Cyclodextrin
Verkhnyatskaya, Stella A.,de Vries, Alex H.,Douma-de Vries, Elmatine,Sneep, Renze J. L.,Walvoort, Marthe T. C.
supporting information, p. 6722 - 6727 (2019/03/26)
A straightforward glycosylation method is described to regio- and stereoselectively introduce two α-l-fucose moieties directly to the secondary rim of β-cyclodextrin. Using NMR and MS fragmentation studies, the nonasaccharide structure was determined, which was also visualized using molecular dynamics simulations. The reported glycosylation method proved to be robust on gram-scale, and may be generally applied to directly glycosylate β-cyclodextrins to make well-defined multivalent glycoclusters.
Zinc and Copper Complexes of Methylated Di- and Tetraaminocyclodextrins
Warren, Julia,Bols, Mikael
, p. 1083 - 1091 (2019/01/24)
The α- and β-cyclodextrins with two dimethylamino groups or two trimethylethylenediamino groups attached to the primary face were synthesized and their pKa values were determined by potentiometric titration. The complexation of the four cyclodextrin analogues with zinc and copper was studied by NMR and showed one or two cyclodextrins bound to the metal. Inclusion of 4-halophenols in the metal complexes were also studied.
Array-based detection of isomeric and analogous analytes employing synthetically modified fluorophore attached β-cyclodextrin derivatives
Chaudhuri, Sauradip,DIScenza, Dana J.,Smith, Benjamin,Yocum, Reid,Levine, Mindy
supporting information, p. 14431 - 14437 (2017/11/28)
Reported herein is a sensitive and selective array-based sensing strategy based on differential interactions with three supramolecular cyclodextrin-fluorophore sensors. Each interaction results in a distinct fluorescence modulation response, and linear discriminant analyses of these responses results in 100% successful classification of three classes of isomeric analytes and two classes of analogous analytes. Calculated limits of detection for this system are at or near literature-reported levels of concern.
Straightforward synthesis towards mono and bis-phosphonic acid functionalised β-cyclodextrins
Marquick, April L.,Montero, Jean-Louis,Lebrun, Aurélien,Barragan-Montero, Véronique
supporting information, p. 1616 - 1621 (2015/03/04)
For the first time a novel class of cyclodextrins bearing phosphonic acid groups has been revealed using a new versatile methodology. These derivatives can be easily synthesised in four easy steps starting from the diol with relatively high percentage yields and no difficult purification procedures. Chemical modifications were carried out in a controlled regioselective manner using a DIBAL promoted de-O-benzylation, followed by a modified Horner-Wadsworth-Emmons reaction to introduce the key phosphorus moieties. Fully deprotected products could have wide applications as useful tools in biological systems as well as key building blocks in complex cyclodextrin chemistry.
Towards the sequence-specific multivalent molecular recognition of cyclodextrin oligomers
Kurlemann, Michael,Ravoo, Bart Jan
supporting information, p. 2428 - 2440 (2015/01/16)
Sequence-specific multivalent molecular recognition has been recognized to play a major role in biological processes. Furthermore, sequence-specific recognition motifs have been used in various artificial systems in the last years, e.g., to emulate biological processes or to build up new materials with highly specific recognition domains. In this article, we present the preparation of cyclodextrin (CD)-based strands and complementary and non-complementary strands modified with guest molecules and the investigation of their complexation behavior towards each other by isothermal titration calorimetry (ITC). As complementary binding motifs n-butyl and α-CD and adamantane and β-CD were selected. It was found that it is possible to realize sequencespecific molecular recognition by the use of host-guest chemistry, but the recognition motifs as well as the linkages have to be chosen very carefully. In the case of trivalent systems one adamantane moiety must be included to induce preferred formation of 1:1 adducts. Due to the too weak interaction between n-butyl and α-CD these systems have a negative chelate cooperativity and open adducts are preferentially formed. As soon as two adamantane moieties are present, the complementary systems have a positive chelate cooperativity and double-stranded structures are favored over open adducts. In this system the n-butyl moiety provides insufficient discrimination towards α- and β-CD and no sequence specificity is observed. By the combination of three adamantane moieties sequence specificity can be generated. Exclusively with the complementary CD sequence double-stranded structures are formed, with non-complementary strands aggregates of higher stoichiometry are generated.
Ultrasensitive QRS made by supramolecular assembly of functionalized cyclodextrins and graphene for the detection of lung cancer VOC biomarkers
Nag, Sananda,Duarte, Lisday,Bertrand, Emilie,Celton, Véronique,Castro, Micka?l,Choudhary, Veena,Guegan, Philippe,Feller, Jean-Fran?ois
supporting information, p. 6571 - 6579 (2015/03/13)
A novel electronic nose system comprising functionalized β-cyclodextrin wrapped reduced graphene oxide (RGO) sensors with distinct ability of discrimination of a set of volatile organic compounds has been developed. Non-covalent modification of chemically functionalized cyclodextrin with RGO is carried out by using pyrene adamantane as a linker wherever necessary, in order to construct a supramolecular assembly. The chemical functionality on cyclodextrin is varied utilising the principle of selective chemical modification of cyclodextrin. In the present study, the combined benefits of the host-guest inclusion complex formation ability and tunable chemical functionality of cyclodextrin, as well as the high surface area and electrical conductivity of graphene, are utilized for the development of a set of highly selective quantum resistive chemical vapour sensors (QRS), which can be assembled in an electronic nose.
Ultrasensitive QRS made by supramolecular assembly of functionalized cyclodextrins and graphene for the detection of lung cancer VOC biomarkers
Nag, Sananda,Duarte, Lisday,Bertrand, Emilie,Celton, Vronique,Castro, Mickal,Choudhary, Veena,Guegan, Philippe,Feller, Jean-Franois
supporting information, p. 6571 - 6579 (2015/05/20)
A novel electronic nose system comprising functionalized β-cyclodextrin wrapped reduced graphene oxide (RGO) sensors with distinct ability of discrimination of a set of volatile organic compounds has been developed. Non-covalent modification of chemically functionalized cyclodextrin with RGO is carried out by using pyrene adamantane as a linker wherever necessary, in order to construct a supramolecular assembly. The chemical functionality on cyclodextrin is varied utilising the principle of selective chemical modification of cyclodextrin. In the present study, the combined benefits of the host-guest inclusion complex formation ability and tunable chemical functionality of cyclodextrin, as well as the high surface area and electrical conductivity of graphene, are utilized for the development of a set of highly selective quantum resistive chemical vapour sensors (QRS), which can be assembled in an electronic nose.
