84828-97-7Relevant academic research and scientific papers
A double-headed nucleotide with two cytosines: DNA with condensed information and improved duplex stability
Beck, Kasper,Reslow-Jacobsen, Charlotte,Hornum, Mick,Henriksen, Christian,Nielsen, Poul
, p. 740 - 743 (2019)
Double-headed nucleotide monomers are capable of condensing the genetic information of DNA. Herein, a double-headed nucleotide with two cytosine bases (CC) is constructed. The additional cytosine is connected through a methylene linker to the 2
Synthesis and biological evaluation of a novel β-D-2′-deoxy-2′-α-fluoro-2′-β-C-(fluoromethyl)uridine phosphoramidate prodrug for the treatment of hepatitis C virus infection
Li, Ertong,Wang, Yafeng,Yu, Wenquan,Lv, Zhigang,Peng, Youmei,Liu, Bingjie,Li, Shiliang,Ho, Wenzhe,Wang, Qingduan,Li, Honglin,Chang, Junbiao
, p. 107 - 113 (2018)
A novel β-D-2′-deoxy-2′-α-fluoro-2′-β-C-(fluoromethyl)uridine phosphoramidate prodrug (1) has been synthesized. This compound exhibits submicromolar-level antiviral activity in vitro against HCV genotypes 1b, 1a, 2a, and S282T replicons (EC50 = 0.18–1.13 μM) with low cytotoxicity (CC50 > 1000 μM). Administered orally, prodrug 1 is well tolerated at doses of up to 4 g/kg in mice, and produces a high level of the corresponding triphosphate in rat liver.
Highly diastereoselective synthesis of (2'S)-[2'-2H]-2'- deoxyribonucleosides from the corresponding ribonucleosides
Kawashima,Aoyama,Radwan,Miyahara,Sekine,Kainosho,Kyogoku,Ishido
, p. 333 - 336 (1995)
The four (2'S)-[2'-2H]-2'-deoxynucleosides (>90 atom % 2H), were synthesized from the corresponding ribonucleosides involving six steps of reactions, i.e., oxidation of their 2'-hydroxyl group, stereoselective reductive deuteration of the resulting 2'-ketonucleoside intermediates with NaB2H4 in EtOH-H2O or EtOH, triflation, bromination with LiBr, highly stereoselective Bu3SnH-Et3B reduction of the resulting bromide, and, finally, unmasking.
Synthesis of dinucleotides with 2′-C to phosphate connections by ring-closing metathesis
B?rsting, Philip,Christensen, Mikkel S.,Steffansen, Signe I.,Nielsen, Poul
, p. 1139 - 1149 (2006)
Four different nucleosides with olefinic 2′-modifications were prepared; 2′-C-methylene, 2′-C-(propen-1-yl), 2′-C-allyl and 2′-O-allyl uridines, respectively. These were incorporated into dinucleotides with allyl phosphate or vinyl phosphonate linkages. Hence, six different dinucleotides were studied as substrates for RCM reactions, and from four of these, cyclic dinucleotides with connections between 2′-C and phosphorus of 3-6 atoms were obtained.
Nucleosides and Nucleotides. 102. Stereoselective Radical Deoxygenation of Tert-Propargyl Alcohols in Sugar Moiety of Pyrimidine Nucleosides: Synthesis of 2'-C-Alkynyl-2'-Deoxy-1-β-D-Arabinofuranosylpyrimidines
Yoshimura, Yuichi,Iino, Tomoharu,Matsuda, Akira
, p. 6003 - 6006 (1991)
Synthesis of the title compounds can be achieved by nucleophilic addition of lithium salts of TMSacetylene and 1-hexyne to 2'-ketouridine followed by radical deoxygenation of the corresponding methoxyaryl ester.Key Words: radical deoygenation; propargyl alcohol; ethynyl substituent; acetylene
Novel intramolecular aminohydroxylation toward the syntheses of 2′-amino-2′-ethynyl nucleosides
Huang, Yuhua,Bennett, Frank,Buevich, Alexei,Girijavallabhan, Vinay,Kerekes, Angela D.,Huang, Hsueh-Cheng,Tawa, Paul,Bogen, Stephane L.,Davies, Ian W.
supporting information, (2021/05/10)
Syntheses of both 2′-amino-2′-ethynyl guanosine and uridine, using an intramolecular aminohydroxylation reaction as the key step, are described. The corresponding 5′-O-triphosphates of the aforementioned nucleosides were obtained and the inhibitory activity was subsequently evaluated against the hepatitis C virus NS5B polymerase.
Base-Pairing Properties of Double-Headed Nucleotides
Hornum, Mick,Stendevad, Julie,Sharma, Pawan K.,Kumar, Pawan,Nielsen, Rasmus B.,Petersen, Michael,Nielsen, Poul
, p. 7387 - 7395 (2019/05/16)
Nucleotides that contain two nucleobases (double-headed nucleotides) have the potential to condense the information of two separate nucleotides into one. This presupposes that both bases must successfully pair with a cognate strand. Here, double-headed nucleotides that feature cytosine, guanine, thymine, adenine, hypoxanthine, and diaminopurine linked to the C2′-position of an arabinose scaffold were developed and examined in full detail. These monomeric units were efficiently prepared by convergent synthesis and incorporated into DNA oligonucleotides by means of the automated phosphoramidite method. Their pairing efficiency was assessed by UV-based melting-temperature analysis in several contexts and extensive molecular dynamics studies. Altogether, the results show that these double-headed nucleotides have a well-defined structure and invariably behave as functional dinucleotide mimics in DNA duplexes.
Novel 2'-uridine azide and synthetic method thereof
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Paragraph 0014, (2018/11/22)
The invention discloses novel 2'-uridine azide and a synthetic method thereof. The structural formula of the compound is as shown in specification, and reaction steps of the synthetic method of the novel 2'-uridine azide are as shown in specification. The
Novel 2'-fluorouracil nucleoside and synthetic method
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Paragraph 0014, (2019/01/05)
The invention discloses a novel 2'-fluorouracil nucleoside and a synthetic method. A structural general formula of a compound is shown as the specification, and the synthetic method comprises the following steps in the specification. The synthesis method
Structure-activity relationship of uridine-based nucleoside phosphoramidate prodrugs for inhibition of dengue virus RNA-dependent RNA polymerase
Wang, Gang,Lim, Siew Pheng,Chen, Yen-Liang,Hunziker, Jürg,Rao, Ranga,Gu, Feng,Seh, Cheah Chen,Ghafar, Nahdiyah Abdul,Xu, Haoying,Chan, Katherine,Lin, Xiaodong,Saunders, Oliver L.,Fenaux, Martijn,Zhong, Weidong,Shi, Pei-Yong,Yokokawa, Fumiaki
supporting information, p. 2324 - 2327 (2018/05/28)
To identify a potent and selective nucleoside inhibitor of dengue virus RNA-dependent RNA polymerase, a series of 2′- and/or 4′-ribose sugar modified uridine nucleoside phosphoramidate prodrugs and their corresponding triphosphates were synthesized and evaluated. Replacement of 2′-OH with 2′-F led to be a poor substrate for both dengue virus and human mitochondrial RNA polymerases. Instead of 2′-fluorination, the introduction of fluorine at the ribose 4′-position was found not to affect the inhibition of the dengue virus polymerase with a reduction in uptake by mitochondrial RNA polymerase. 2′-C-ethynyl-4′-F-uridine phosphoramidate prodrug displayed potent anti-dengue virus activity in the primary human peripheral blood mononuclear cell-based assay with no significant cytotoxicity in human hepatocellular liver carcinoma cell lines and no mitochondrial toxicity in the cell-based assay using human prostate cancer cell lines.
