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Basic Information
CAS No.: 2086-83-1
Name: Berberine
Molecular Structure:
Molecular Structure of 2086-83-1 (Berberine)
Formula: C20H18NO4
Molecular Weight: 336.367
Synonyms: Berbinium,7,8,13,13a-tetradehydro-9,10-dimethoxy-2,3-(methylenedioxy)- (8CI);Umbellatine(6CI);Berbericine;Berberin;Majarine;Thalsine;Umbellatin;5,6-Dihydro-9,10-dimethoxybenzo[g]-1,3-benzodioxolo[5,6-a]quinolizinium;
EINECS: 218-229-1
Density: 1.2976 (rough estimate)
Melting Point: 204-206 °C (dec.)
Boiling Point: 486.8°C (rough estimate)
Solubility: SOLUBLE IN COLD WATER
Appearance: Yellow
Transport Information: UN 1544
PSA: 40.80000
LogP: 3.09630
Synthetic route
94272-86-3

C21H19NO6

2086-83-1

berberine

Conditions
ConditionsYield
With sodium cyanoborohydride In methanol96%
29074-38-2

canadine

2086-83-1

berberine

Conditions
ConditionsYield
With iodine In ethanol at 20℃;90%
Multi-step reaction with 2 steps
1.1: 81 percent / mCPBA / CHCl3 / 20 °C
2.1: TFAA / CH2Cl2 / -30 - 20 °C
2.2: NaOAc / CH2Cl2; H2O / 0.5 h / 20 °C
View Scheme
With (S)-tetrahydroprotoberberine oxidase; tris hydrochloride at 37℃; for 2h; pH=8.8; Enzymatic reaction;

2-{6-[(7,8-dimethoxyisoquinolin-3-yl)]benzo[d][1,3]-dioxol-5-yl}ethanol

2086-83-1

berberine

Conditions
ConditionsYield
With methanesulfonyl chloride; triethylamine In dichloromethane at 20℃; for 6h;88%
151-50-8

potassium cyanide

75821-49-7

(+/-)-trans-canadine N-oxide

A

2086-83-1

berberine

(8S,14S)-(+/-)-8-cyanocanadine

Conditions
ConditionsYield
Stage #1: (+/-)-trans-canadine N-oxide With trifluoroacetic anhydride In dichloromethane at -30 - 20℃; Elimination; Polonovski-Potier reaction;
Stage #2: potassium cyanide With sodium acetate In dichloromethane; water at 20℃; for 0.5h; Addition; tautomerization; aromatization;
A n/a
B 29%
29074-38-2

canadine

A

549-21-3

oxyberberine

B

2086-83-1

berberine

C

64939-64-6, 66408-44-4

3-<3,4-dihydro-1-oxo-6,7-(methylenedioxy)-2H-isoquinolin-2-yl>-4,5-dimethoxy-1(3H)-isobenzofuranone

Conditions
ConditionsYield
With iodosylbenzene; tetra-(n-butyl)ammonium iodide In water; acetonitrile at 50℃; for 18h;A 6%
B 15%
C 25%
29074-38-2

canadine

A

2086-83-1

berberine

B

H2O2, H2O

H2O2, H2O

Conditions
ConditionsYield
With (S)-protoberberine oxidase; oxygen Equilibrium constant; enzyme activity for the substrate;
113975-46-5

9,10-dimethoxy-5,6,7,8-tetrahydro-2H-1,3-dioxolano[4,5-g]isoquinolino[3,2-a]isoquinoline-8-carbonitrile

2086-83-1

berberine

Conditions
ConditionsYield
Multi-step reaction with 3 steps
1.1: NaBH4
2.1: 81 percent / mCPBA / CHCl3 / 20 °C
3.1: TFAA / CH2Cl2 / -30 - 20 °C
3.2: NaOAc / CH2Cl2; H2O / 0.5 h / 20 °C
View Scheme
633-65-8

berberine chloride

2086-83-1

berberine

Conditions
ConditionsYield
Multi-step reaction with 3 steps
1.1: NaBH4 / methanol
2.1: 81 percent / mCPBA / CHCl3 / 20 °C
3.1: TFAA / CH2Cl2 / -30 - 20 °C
3.2: NaOAc / CH2Cl2; H2O / 0.5 h / 20 °C
View Scheme
Multi-step reaction with 4 steps
1.1: 95 percent / methanol; H2O
2.1: NaBH4
3.1: 81 percent / mCPBA / CHCl3 / 20 °C
4.1: TFAA / CH2Cl2 / -30 - 20 °C
4.2: NaOAc / CH2Cl2; H2O / 0.5 h / 20 °C
View Scheme
With sodium tetrahydroborate In pyridine at 20℃;
94272-85-2

C21H21NO6

2086-83-1

berberine

Conditions
ConditionsYield
Multi-step reaction with 2 steps
1: 93 percent / silver carbonate / benzene / Heating
2: 96 percent / sodium cyanoborohydride / methanol
View Scheme
84229-90-3

spirobenzylisoquinoline

2086-83-1

berberine

Conditions
ConditionsYield
Multi-step reaction with 3 steps
1: 94 percent / methanol / Ambient temperature
2: 93 percent / silver carbonate / benzene / Heating
3: 96 percent / sodium cyanoborohydride / methanol
View Scheme
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483-15-8
3486-66-6
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Specification

The Berberine, with the CAS registry number 2086-83-1, is also known as 5,6-Dihydro-9,10-dimethoxybenzo[g]-1,3-benzodioxolo[5,6-a]quinolizinium. Its EINECS number is 211-195-9. This chemical's molecular formula is C20H18NO4 and molecular weight is 336.37. What's more, its systematic name is 9,10-Dimethoxy-5,6-dihydro[1,3]dioxolo[4,5-g]isoquinolino[3,2-a]isoquinolin-7-ium. Its classification code is Mutation data. This chemical is used in histology for staining heparin in mast cells because of a strong yellow fluorescence. As a traditional medicine or dietary supplement, it has showed some activity against fungal infections, Candida albicans, yeast, parasites and bacterial/viral infections. Berberine is considered as an ineffective antibiotic and is a component of some eye drop formulations.

Physical properties of Berberine are: (1)ACD/LogP: 0.053; (2)# of Rule of 5 Violations: 0; (3)ACD/LogD (pH 5.5): 0.05; (4)ACD/LogD (pH 7.4): 0.05; (5)ACD/BCF (pH 5.5): 1.00; (6)ACD/BCF (pH 7.4): 1.00; (7)ACD/KOC (pH 5.5): 25.46; (8)ACD/KOC (pH 7.4): 25.46; (9)#H bond acceptors: 5; (10)#H bond donors: 0; (11)#Freely Rotating Bonds: 2; (12)Polar Surface Area: 40.8 Å2.

Preparation: this chemical can be prepared by C21H19NO6. This reaction will need reagent sodium cyanoborohydride and solvent methanol. The yield is about 96%.

Berberine can be prepared by C21H19NO6

Uses of Berberine: it can be used to produce 9,10-dimethoxy-5,8,13,13a-tetrahydro-6H-[1,3]dioxolo[4,5-g]isoquino[3,2-a]isoquinoline by heating. It will need reagents In, aq. NH4Cl and solvent ethanol with the reaction time of 10 hours. The yield is about 83%.

Berberine can be used to produce 9,10-dimethoxy-5,8,13,13a-tetrahydro-6H-[1,3]dioxolo[4,5-g]isoquino[3,2-a]isoquinoline by heating

You can still convert the following datas into molecular structure:
(1)SMILES: O1c2c(OC1)cc5c(c2)c4cc3ccc(OC)c(OC)c3c[n+]4CC5
(2)Std. InChI: InChI=1S/C20H18NO4/c1-22-17-4-3-12-7-16-14-9-19-18(24-11-25-19)8-13(14)5-6-21(16)10-15(12)20(17)23-2/h3-4,7-10H,5-6,11H2,1-2H3/q+1
(3)Std. InChIKey: YBHILYKTIRIUTE-UHFFFAOYSA-N

The toxicity data is as follows: 

Organism Test Type Route Reported Dose (Normalized Dose) Effect Source
mouse LD50 oral 329mg/kg (329mg/kg)   Yakugaku Zasshi. Journal of Pharmacy. Vol. 82, Pg. 726, 1962.
mouse LD50 subcutaneous 18mg/kg (18mg/kg)   Russian Pharmacology and Toxicology Vol. 31, Pg. 129, 1968.
rabbit LDLo subcutaneous 100mg/kg (100mg/kg)   "Abdernalden's Handbuch der Biologischen Arbeitsmethoden." Vol. 4, Pg. 1289, 1935.
rat LD intraperitoneal > 500mg/kg (500mg/kg)   National Academy of Sciences, National Research Council, Chemical-Biological Coordination Center, Review. Vol. 5, Pg. 17, 1953.