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Basic Information
CAS No.: 113852-37-2
Name: Cidofovir
Molecular Structure:
Molecular Structure of 113852-37-2 (Cidofovir)
Formula: C8H14N3O6P
Molecular Weight: 279.189
Synonyms: Phosphonicacid, [[(1S)-2-(4-amino-2-oxo-1(2H)-pyrimidinyl)-1-(hydroxymethyl)ethoxy]methyl]-(9CI);Phosphonic acid,[[2-(4-amino-2-oxo-1(2H)-pyrimidinyl)-1-(hydroxymethyl)ethoxy]methyl]-, (S)-;(S)-1-(3-hydroxy-2-phosphonomethoxypropyl)cytosine;(S)-HPMPC;1-(S)-(3-Hydroxy-2-phosphonylmethoxypropyl)cytosine;1-[(S)-3-Hydroxy-2-(phosphonomethoxy)propyl]cytosine;Cidovir;GS 0504;HPMPC;Vistide;
EINECS: 638-807-0
Density: 1.76 g/cm3
Melting Point: 260 °C
Boiling Point: 609.5 °C at 760 mmHg
Flash Point: 322.4 °C
Appearance: fluffy white powder
Hazard Symbols: T
Risk Codes: 25-38
Safety: 36-37-45
PSA: 157.71000
LogP: -1.08060
Synthetic route
120362-35-8

(S)-1-<3-Hydroxy-2-<(diethylphosphonyl)methoxy>propyl>cytosine

113852-37-2

cidofovir

Conditions
ConditionsYield
With trimethylsilyl bromide In acetonitrile for 14h; Ambient temperature;95%
With trimethylsilyl bromide80%
132336-37-9

N4-benzoyl-1-(S)-(3-hydroxy-2-phosphonomethoxypropyl)cytosine

113852-37-2

cidofovir

Conditions
ConditionsYield
With ammonium hydroxide at 20℃; for 3h;80%
With ammonium hydroxide for 4h; Ambient temperature; Yield given;

C10H16N3O7P

113852-37-2

cidofovir

Conditions
ConditionsYield
With ammonium hydroxide at 20℃; for 3h;71%
18002-25-0

4-methoxy-2-pyrimidone

141110-74-9

(R)-2--3-ytimethylacetyl-1,2,3-propanetriol 1-p-toluenesulfonate

113852-37-2

cidofovir

Conditions
ConditionsYield
Yield given. Multistep reaction;
71-30-7

Cytosine

141110-74-9

(R)-2--3-ytimethylacetyl-1,2,3-propanetriol 1-p-toluenesulfonate

113852-37-2

cidofovir

Conditions
ConditionsYield
With trimethylsilyl bromide; caesium carbonate 1.) DMFA, 100 deg C, 72 h, 2.) CH3CN, RT, 24 h; Yield given. Multistep reaction;
148873-52-3

bis(2-propyl) N4-benzoyl-1-(S)-(2-phosphonomethoxy-3-triphenylmethoxypropyl)cytosine

113852-37-2

cidofovir

Conditions
ConditionsYield
With trimethylsilyl bromide; sodium methylate 1.) CH3CN, overnight, 2.) CH3OH, RT, overnight; Yield given. Multistep reaction;
148873-53-4

bis(2-propyl) 1-(S)-(3-hydroxy-2-phosphonomethoxypropyl)cytosine

113852-37-2

cidofovir

Conditions
ConditionsYield
With trimethylsilyl bromide; water; triethylamine 1.) CH3CN, overnight, 2.) 20 min; Multistep reaction;
132336-34-6

(S)-N1-[2-hydroxy-3-(triphenylmethoxy)propyl]-N4-benzoylcytosine

113852-37-2

cidofovir

Conditions
ConditionsYield
Multi-step reaction with 4 steps
1: NaH / dimethylformamide / 6 h / 0 °C
2: HCl(g) / CH2Cl2 / 0.17 h / 0 - 5 °C
3: TMSBr / CH2Cl2 / 18 h / Ambient temperature
4: conc. NH4OH / 4 h / Ambient temperature
View Scheme
Multi-step reaction with 4 steps
1: potassium carbonate / acetonitrile / 12 h / 60 °C
2: trifluoroacetic acid / dichloromethane / 6 h / 20 °C
3: trimethylsilyl bromide / dichloromethane / 18 h / 20 °C
4: ammonium hydroxide / 3 h / 20 °C
View Scheme
132336-36-8

diethyl (S)-4-N-benzoyl-1-[3-hydroxy-2-(phosphonomethoxy)propyl]cytosine

113852-37-2

cidofovir

Conditions
ConditionsYield
Multi-step reaction with 2 steps
1: TMSBr / CH2Cl2 / 18 h / Ambient temperature
2: conc. NH4OH / 4 h / Ambient temperature
View Scheme
132336-35-7

[(S)-1-(4-Benzoylamino-2-oxo-2H-pyrimidin-1-ylmethyl)-2-trityloxy-ethoxymethyl]-phosphonic acid diethyl ester

113852-37-2

cidofovir

Conditions
ConditionsYield
Multi-step reaction with 3 steps
1: HCl(g) / CH2Cl2 / 0.17 h / 0 - 5 °C
2: TMSBr / CH2Cl2 / 18 h / Ambient temperature
3: conc. NH4OH / 4 h / Ambient temperature
View Scheme
Multi-step reaction with 3 steps
1: trifluoroacetic acid / dichloromethane / 6 h / 20 °C
2: trimethylsilyl bromide / dichloromethane / 18 h / 20 °C
3: ammonium hydroxide / 3 h / 20 °C
View Scheme
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Analytical Methods

Antineoplastic Agents : substances that inhibit or prevent the proliferation of NEOPLASMS

Specification

The Phosphonic acid,P-[[(1S)-2-(4-amino-2-oxo-1(2H)-pyrimidinyl)-1-(hydroxymethyl)ethoxy]methyl]-, with the CAS registry number 113852-37-2, is also known as 1-(S)-(3-Hydroxy-2-phosphonylmethoxypropyl)cytosine. This chemical's molecular formula is C8H14N3O6P and molecular weight is 279.19. What's more, its systematic name is ({[(2S)-1-(4-amino-2-oxopyrimidin-1(2H)-yl)-3-hydroxypropan-2-yl]oxy}methyl)phosphonic acid. Its classification codes are: (1)Anti-HIV agents; (2)Anti-Infective Agents; (3)Anti-Retroviral Agents; (4)Antineoplastic Agents; (5)Antiviral; (6)Antiviral agents; (7)Radiation-Sensitizing Agents. It is a potent, selective inhibitor of human cytomegalovirus replication. It is an injectable antiviral medication for the treatment of cytomegalovirus (CMV) retinitis in patients with AIDS.

Physical properties of Phosphonic acid,P-[[(1S)-2-(4-amino-2-oxo-1(2H)-pyrimidinyl)-1-(hydroxymethyl)ethoxy]methyl]- are: (1)ACD/LogP: -3.37; (2)# of Rule of 5 Violations: 1; (3)ACD/LogD (pH 5.5): -6.65; (4)ACD/LogD (pH 7.4): -7.31; (5)ACD/BCF (pH 5.5): 1; (6)ACD/BCF (pH 7.4): 1; (7)ACD/KOC (pH 5.5): 1; (8)ACD/KOC (pH 7.4): 1; (9)#H bond acceptors: 9; (10)#H bond donors: 5; (11)#Freely Rotating Bonds: 7; (12)Polar Surface Area: 99.71 Å2; (13)Index of Refraction: 1.656; (14)Molar Refractivity: 58.29 cm3; (15)Molar Volume: 158.6 cm3; (16)Polarizability: 23.1×10-24cm3; (17)Surface Tension: 90.5 dyne/cm; (18)Density: 1.76 g/cm3; (19)Flash Point: 322.4 °C; (20)Enthalpy of Vaporization: 103.84 kJ/mol; (21)Boiling Point: 609.5 °C at 760 mmHg; (22)Vapour Pressure: 2.11E-17 mmHg at 25°C.

Preparation: first dissolving 1-(2, 3-dihydroxypropyl)cytosine in triethyl phosphate, then adding in ClCH2P(O)Cl2 by stiring, and then mixing and rejoining the ether, filtering and collecting the precipitates which are washed with ether and then dried in the vacuum. Then dissolving the intermediate product in water and conducting backflow which is then neutralized with triethylamine and evaporated out solvent in the vacuum. Finally by column chromatography, the product is prepared.

You can still convert the following datas into molecular structure:
(1)SMILES: O=C1/N=C(\C=C/N1C[C@H](OCP(=O)(O)O)CO)N
(2)Std. InChI: InChI=1S/C8H14N3O6P/c9-7-1-2-11(8(13)10-7)3-6(4-12)17-5-18(14,15)16/h1-2,6,12H,3-5H2,(H2,9,10,13)(H2,14,15,16)/t6-/m0/s1
(3)Std. InChIKey: VWFCHDSQECPREK-LURJTMIESA-N