Dimerization of Amino Acid N-Carboxanhydrides
J . Org. Chem., Vol. 61, No. 1, 1996 231
Gen er a l P r oced u r e for Ba se-In d u ced Dim er iza tion of
UNCAs. A solution of 10 mmol of urethane-protected amino
acid-NCA in 25 mL of dry THF was cooled to -78 °C under
N2. A solution of 1 M LHS in THF (5 mL) was added slowly
via syringe. The reaction mixture was allowed to warm to
room temperature (ca. 2 h). It was then quenched with 20
mL of 1 N HCl and extracted with EtOAc. The organic phase
was dried with MgSO4 and concentrated in vacuo to yield a
thick oil. The product was purified by flash column chroma-
tography (hexane/EtOAc 2:1, unless otherwise described).
Optical rotations were measured in EtOAc (1 g/100 mL).
ter t-Bu t yl 3,5-(Z)-Dib en zyl-3-[(ter t-b u t oxyca r bon yl)-
a m in o]-2,4-d ioxo-1-p yr r olid in eca r boxyla te (2) (Der ived
fr om Boc-P h e-NCA). The product was purified by hexane/
EtOAc (3:1) to obtain 1.73 g (35%). 1H NMR (d6-DMSO) δ:
8.4 (s, 1H), 7.4-6.9 (m, 10H), 3.2 (m, 1H), 3.1-2.8 (m, 4H),
1.5 (s, 9H), 1.4 (s, 9H). Mass spectra: m/ e 517.2 (M + Na)+.
Anal. Calcd for C28H34N2O6: C, 68.00; H, 6.93; N, 5.66.
Found: C, 68.23; H, 7.12; N, 5.60. HPLC: tR ) 34.71 min.
ter t-Bu t yl 3,5-(E)-Dib en zyl-3-[(ter t-b u t oxyca r b on yl)-
a m in o]-2,4-d ioxo-1-p yr r olid in eca r boxyla te (3) (Der ived
fr om Boc-P h e-NCA). DBU was substituted for LHS. Crude
product was recrystallized from MeOH to yield 0.63 g (26%).
This is the second peak by HPLC. 1H NMR (d6-DMSO) δ: 8.5
(s, 1H), 7.4-7.0 (m, 10H), 3.3 (m, 1H), 3.2-2.9 (m, 4H), 1.45
(s, 9H), 1.4 (s, 9H). Mass spectra: m/ e 295.0 (MH - 2Boc)+.
Anal. Calcd for C28H34N2O6: C, 68.00; H, 6.93; N, 5.66.
Found: C, 67.98; H, 6.91; N, 5.74. HPLC: tR ) 35.45 min.
N-r-(Ben zyloxyca r bon yl)-L-va lin e N-(3,5-(Z)-Diben zyl-
2,4-d ioxo-3-p yr r olid in yl)a m id e (4). A mixture containing
2 (1.0 g, 2 mmol) in a solution of 10 mL of 1 M HCl/EtOAc
was stirred for 1 h, concentrated, and dried. This residue, Cbz-
Val-OH (0.51 g, 2 mmol), EDC (0.39 g, 2 mmol), HOBt (0.27
g, 2 mmol) and NMM (0.22 mL, 2 mmol) in DMF were stirred
for 16 h at 25 °C. The reaction was quenched with 5% citric
acid and extracted with EtOAc. The organic phase was
washed with 5% NaHCO3, 5% citric acid, and water, dried with
MgSO4, and concentrated. The residue was purified over silica
gel (hexane/EtOAc, 1.5:1) to yield 0.43 g of a white solid (82%).
1H NMR (d6-DMSO) δ: 9.0 (s, 1H), 8.4 (s, 1H), 7.4-7.1 (m,
13H), 6.8 (m, 2H), 5.0 (m, 2H), 4.0-3.9 (m, 2H), 3.2-2.7 (m,
4H), 2.0-1.8 (m, 2H), 1.0 (m, 1H), 0.8 (m, 6H). Mass spectra:
3.4 (m, 2H), 4.0-4.2 (m, 2H), 5.0-5.2 (m, 2H), 7.1-7.5 (m,
l5H), 7.95 (s, lH), 8.4 (m, lH), 9.0 (s, lH). Mass spectra: m/ e
550.2 (M + Na)+. Anal. Calcd from C33H31N30s: C, 70.57; H,
6.30; N, 7.96. Found: C, 68.84; H, 6.23; N, 8.32. HPLC: two
isomers (50:50) were observed [tR ) 23.12 min (A) and 24.80
min (B)].
Con ver sion of 2 to 3 a n d Syn th esis of 6. A soluton of
1.6 g of 2 (3.3 mmol) in dry THF was cooled to -78 °C under
N2, DBU (500 mL, 3.3 mmol) was added, and the reaction
mixture was stirred for 2 h. The solvent was removed in vacuo
and the residue partitioned between EtOAc and 5% citric acid.
The organic phase was washed with 5% NaHCO3, dried with
MgSO4, and concentrated to yield a white solid. Recrystalli-
zation from MeOH yielded 0.6 g (36%) of 3. 1HNMR (d6-
DMSO) δ: 1.35 (s, 9H), 1.45 (s, 9H), 2.9-3.2 (m, 4H), 3.3 (m,
1H), 6.9-7.3 (m, 10H), 8.45 (s, 1H). Mass spectra: m/ e 517.4
(M + Na)+. Anal. Calcd from C28H34N2O6: C, 68.00; H, 6.93;
N, 5.66. Found: C, 67.90; H, 6.88; N, 5.74. HPLC (3, tR
)
35.49 min).
Compound 3 from this reaction was dissolved in 10 mL of 1
M HCl in EtOAC and stirred for 1 h. The solution was
concentrated in vacuo and yielded 0.24 g of white solid. Mass
spectrum: m/ e 295.3 (MH)+. A DMF solution containing 0.407
mg, 1 mmol) of this product (0.25 g, 1 mmol), CBZ-Val-OH,
(0.25 g, 1 mmol) EDC, HOBt (0.176 g, 1.3 mmol), and NMM
(0.22 mL, 2 µmol) was stirred for 18 h at rt. The DMF was
removed in vacuo, and the residue was partitioned between
EtOAc and 5% NaHCO3. The organic phase was washed with
5% citric acid, dried with MgSO4, and concentrated to yield
0.48 g of white solid. Purification by silica gel chromatography
(5% MeOH/CH2Cl2) yielded 0.21 of a material that was
identical to 6. Mass spectra: m/ e 528.5 (MH)+. HPLC:
indicated the presence of two isomers (50:50). (tR ) 23.17 and
24.81 min). Both isomers were isolated by HPLC on a small
scale and analyzed by mass spectroscopy. Both peaks gave a
m/ e of 528.3 (MH)+.
ter t-Bu tyl 3[(ter t-bu toxycar bon yl)am in o]-3,5-dim eth yl-
2,4-d ioxo-1-p yr r olid in eca r b oxyla t e (7) (Der ived fr om
Boc-Ala -NCA). The yield was 1.14 g (23%). 1H NMR (d6-
DMSO) δ: 8.25 (s, 1H), 8.15 (s, 1H), 4.65 (m, 1H), 4.35 (m,
1H), 1.5 (s, 18H), 1.45 (m, 6H), 1.35 (m, 18H), 1.3-1.25 (m,
6H). Mass spectra: m/ e 143 (MH - 2Boc)+. Anal. Calcd for
C16H26N2O6: C, 56.11; H, 7.66; N, 8.11. Found: C, 55.90; H,
7.67; N, 8.06.
m/ e 528.4 (MH)+. Optical rotation: [R]20 ) -131.0°.
589
N-r-(Ben zyloxyca r bon yl)-L-va lin e N-(3,5-(Z)-Diben zyl-
4-h yd r oxy-2-oxo-3-p yr r olid in yl)a m id e (5). Compound 4
(0.9 g, 1.7 mmol) was dissolved in 50 mL of MeOH. An excess
of NaBH4 was added and the reaction stirred 20 min. The
reaction was concentrated, water was added, and a white solid
was filtered. Recrystallization from 30 mL of MeOH yielded
0.3 g of white solid (77%). 1H NMR (see Figure 1). Mass
spectra: m/ e 530.4 (MH)+. Anal. Calcd for C31H35N3O5(0.65
mol H2O): C, 68.80; H, 6.71; N, 7.77. Found: C, 68.84; H,
ter t-Bu tyl 3,5-Bis((R)-1-Meth ylp r op yl)-3-[(ter t-bu toxy-
ca r bon yl)a m in o]-2,4-d ioxo-1-p yr r olid in eca r boxyla te (8)
(Der ived fr om Boc-Ile-NCA). The yield was 1.06 g (50%).
The product was purified by hexane/EtOAc (3:1). 1H NMR (d6-
DMSO) δ 7.9 (s, 1H), 4.2 (m, 1H), 2.0 (m, 1H), 1.8 (m, 1H), 1.5
(s, 9H), 1.3 (s, 9H), 1.1-0.7 (m, 16H). Mass spectra: m/ e 449
(M + Na)+. Anal. Calcd for C22H38N2O6: C, 61.93; H, 8.98;
6.68; N, 7.82. [R]20 ) -113.9°.
589
N-r-(Ben zyloxyca r bon yl)-L-va lin e N-(3,5-(E)-Diben zyl-
2,4-d ioxo-3-p yr r olid in yl)a m id e (6). Compound 3 (2 g, 4.04
mmol) was dissolved in 10 mL of 1 M HCl in EtOAc and stirred
for 1 h. The solvent was removed in vacuo, and the remaining
solid was crystallized with ether yielding 1.5 g (91%) of white
solid that was used without further purification. 1H NMR (d6-
DMSO) δ: 2.7-2.8 (m, lH), 3.1-3.4 (m, 3H), 3.7-3.75 (m, lH),
7.2-7.4 (m, 10H), 9.0-9.2 (m, 3H). Mass spectra: m/ e 295.0
(MH)+.
N, 6.57. Found: C, 61.86; H, 8.93; N, 6.52. [R]20 ) -6.35°.
589
ter t-Bu tyl 3,5-Bis[(R)-1-(ben zyloxy)eth yl]-3-[(ter t-bu -
t oxyca r b on yl)a m in o]-2,4-d ioxo-1-p yr r olid in eca r b oxyl-
a te (9) (Der ived fr om Boc-Th r (Bzl)-NCA). The yield was
1.4 g (24%). 1H NMR (d6-DMSO) δ: 8.05 (s, 1H), 7.4-7.05
(m, 10H), 4.6-4.5 (m, 2H), 4.3 (m, 2H), 4.1 (m, 1H), 4.0-3.8
(m, 2H), 1.35 (s, 18H), 1.3-1.2 (m, 6H). Mass spectra: m/ e
605 (M + Na)+. Anal. Calcd for C32H42N2O8: C, 65.95; H, 7.27;
A DMF mixture consisting of the deprotected 3 (1.23 g, 3
mmol), CBZ-Val-OH (753 mg, 3 mmol), HOBt (406 mg, 3
mmol), NMM (300 µL, 3 mmol), and EDC (575 mg, 3 mmol)
was stirred at rt for 12 h. Volatiles were removed, and the
residue was dissolved in EtOAc. This was then washed with
5% citric acid and 5% NaHCO3, dried (MgSO4), and concen-
trated. This material was purified over silica gel (5% MeOH/
CH2C12) to obtain 1.11 g (70%) of 6. lH NMR (d6-DMSO) δ:
0.85-0.95 (m, 6H), 1.9-2.1 (m, lH), 2.85-3.0 (m, 2H), 3.1-
N, 4.81. Found: C, 65.22; H, 7.29; N, 4.76. [R]20 ) -20.6°.
589
Ack n ow led gm en t. We thank Tony Landavazo for
helping us to prepare this manuscript, Brad Cozart and
Brian Herring for technical assistance, and Andrew
Spaltenstein for helpful discussions. We thank the
scientists from MolecularStructures for solving the
X-ray structure of 5.
(9) Miller, R.; Gallo, S. M.; Khalak, H. G.; Weeks, C. M. J . Appl.
Crystallogr. 1994, 27, 613-621.
(10) The author has deposited atomic coordinates for 5 with the
Cambridge Crystallographic Data Centre. The coordinates can be
obtained, on request, from the Director, Cambridge Crystallographic
Data Centre, 12 Union Road, Cambridge, CB2 1EZ, UK.
J O951260F