Enzymatic Hydrolysis of Mixed (2′-5′)-(3′-5′)-Oligonucleotides 8 by Enzyme Complex Nuclease/Phosphatase of
Fungus S. violacea. A mixture of oligomers 8 (0.2 g) was treated with water (17.7 mL), sodium-acetate buffer (6.7 mL, 1 M,
pH 6.0), MgCl solution (0.67 mL, 0.5 M), and FCM of S. violacea (10.4 mL) [20]; stored in a thermostat at 55°C for 6 h;
2
treated with FCM (10.4 mL); stored for another 12 h; heated on a boiling water bath for 3 min; and centrifuged for 10 min at
2,600 rpm. The supernatant was diluted with water to 400 mL, placed on a column with DEAE-Sephadex A-25 in the
3
HCO − -form (120 cm ), and eluted with water until absorption in UV light disappeared and then with a gradient of TEAB from
3
0 to 0.5 M (total volume 2 L). Fractions containing pure oligoadenylates 4 (n = 0-2) were combined and evaporated. The solids
were evaporated with ethanol. Precipitation from methanol solutions by NaI solution (1 M) in acetone produced sodium salts
of the following compounds (in order of elution from the column):
6-N-Benzyladenylyl(2′-5′)-6-N-benzyladenosine (4, n = 0, 32.8 mg, 21.4% calculated for 7a and 7b), R 0.80 (B),
f
UV spectrum (MeOH, λ , nm): 270 (4.52). PMR spectrum (D O, δ, ppm, J/Hz): 8.19 (1H, s), 8.15 (s, 1H), 7.87 (1H, s), 7.82
max
2
(1H, s, 2H-2, 2H-8), 7.41-7.22 (10H, m, 2C H ), 6.17 (1H, d, H-1′, J1′,2′ = 5.22), 5.83 (1H, d, H-1′, J1′,2′ = 3.63), 5.23 (1H, m,
6
5
H-2′, J
= 9.1);
2′,P
6-N-Benzyladenylyl(2′-5′)-6-N-benzyladenylyl(2′-5′)-6-N-benzyladenosine (4, n = 1, 16.0 mg, 10.1%), R 0.78 (B),
f
UV spectrum (MeOH, λ , nm): 270 (4.71). PMR spectrum (D O, δ, ppm, J/Hz): 8.13 (1H, s), 8.08 (1H, s), 8.04 (1H, s), 7.98
max
2
(1H, s), 7.81 (1H, s), 7.75 (1H, s, 3H-2, 3H-8), 7.37-7.18 (15H, m, 3C H ), 6.08 (1H, d, H-1′, J1′,2′ = 5.19), 6.01 (1H, d, H-1′,
6
5
31
J1′,2′ = 4.44), 5.86 (1H, d, H-1′, J1′,2′ = 3.00), 5.07 (1H, m, H-2′, J
= 8.4).
P NMR spectrum (D O, δ, ppm): −1.39 s,
2′,P
2
−0.97 s;
6-N-Benzyladenylyl(2′-5′)-6-N-benzyladenylyl(2′-5′)-6-N-benzyladenylyl-(2′-5′)-6-N-benzyladenosine (4, n = 2,
3.8 mg, 2.4%), R 0.75 (B), UV spectrum (MeOH, λ , nm): 270 (4.74).
f
max
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