S. Penadꢂs et al.
200 mm imidazole in solubilizing buffer) was dialyzed against 2 L of
100 mm Tris-HCl, pH 8.0, containing 0.01% 2-mercaptoethanol, 10 mm
CaCl2, and 6m urea, then successively against the same buffer with 4m
urea, 2m urea, and no urea. Final dialysis was against 100 mm Tris-HCl,
pH 8.0, containing 10 mm CaCl2. After dialysis, the insoluble precipitate
was removed by centrifugation at 100000 ꢇ g for 30 min at 48C and re-
folded DC-SIGN contained in the soluble fraction was purified by d-
mannose affinity chromatography as previously described.[58] Fractions
were analyzed by SDS-PAGE and protein concentrations were deter-
mined by densitometric analysis using the GeneSnap software (Syngene,
Cambridge, UK). The identity of the protein was confirmed by LC MS/
MS analysis (MRC Clinical Sciences Centre, Imperial College London,
London, UK).
zation afforded the glycoconjugates 33–38. For the sake of clarity, these
neoglycoconjugates are all named as their disulfides. The thiol/disulfide
ratio is reported in each case on the basis of the integrals of the relevant
1
signals in the corresponding H NMR spectra.
23,23’-Dithiobis[N-(ethyl a-d-mannopyranosyl),N’-(3,6,9,12-tetraoxa-tri-
cosanyl)thiourea] (33): Reaction of mannoside 27 (50.0 mg, 0.224 mmol)
and linker 39 (207.7 mg, 0.448 mmol) afforded neoglycoconjugate 33 in
the form of the disulfide (117.4 mg, 0.182 mmol, 81% over two steps) as
a colourless syrup after purification by passage through Sephadex LH-20
(CH2Cl2/MeOH 4:1). 1H NMR (300 MHz, CD3OD): d=4.78 (s, 1H; 1-
H), 3.90–3.51 (m, 26H), 3.47 (t, J=6.6 Hz, 2H; OCH2CH2CH2), 2.69 (t,
J=6.9 Hz, 2H; CH2SS), 1.72–1.64 (m, 2H), 1.61–1.53 (m, 2H), 1.47–
1.20 ppm (m, 14H); 13C NMR (75 MHz, CD3OD): d=101.8 (d; C-1),
74.8, 72.6, 72.4, 72.1, 71.6, 71.4, 71.2, 70.7, 68.6, 67.4 (t; NHCH2CH2O),
62.9 (t; C-6), 45.3 (brt; CH2NHCS), 39.9 (t; CH2SS), 30.8, 30.7, 30.6,
30.36, 30.27, 29.5, 27.3 ppm; C=S undetected; IR (neat): n˜ =3331 (brs),
2924, 2854, 1647, 1560, 1458, 1348, 1294, 1097 cmꢁ1; HRMS: m/z: calcd
for C28H56N2O10S2Na+ [M+Na]+: 667.3274; found: 667.3273.
Surface plasmon resonance assays
Inhibition studies: gp120 in 10 mm sodium acetate at pH 4.0 was immobi-
lized (approximately 1000 RU, which corresponds to ~1 ng of immobi-
lized ligand on a CM5 sensor chip)[59] on the surface of Flow cell 2 of a
CM5 sensor chip following the standard amine coupling procedure (GE
Healthcare, Uppsala, Sweden). Flow cell 1 (activated and blocked with
ethanolamine) served as a reference (blank) cell. Non-saturation binding
concentrations of DC-SIGN were chosen to increase the sensitivity of the
inhibition assay. Binding of fluid-phase DC-SIGN-ECD at a concentra-
tion of 50 nm was determined in the presence of free alkyl amino (oligo)-
mannosides (0.01–3 mm), methyl a-d-mannopyranoside (0.5–25 mm,
Sigma–Aldrich), or GNPs and compared to the binding activity of DC-
SIGN-ECD alone. GNPs 1, 2, 3, and 3a were tested at concentrations in
the range 0.5–20 mm. For GNPs 5 and 6, concentrations were varied in
the range 0.1–2.0 mm. GNPs 4, 9, and 9a were tested at 6–130 nm.
GlcC5Au and HO2C-Au GNPs were tested at 1 mm and 2 mm, respectively.
For GNPs that showed direct binding activity to gp120, final inhibition
sensorgrams were obtained by subtraction of the sensorgram for injection
of GNPs alone from that generated by injection of GNPs in the presence
of DC-SIGN. Fluid-phase compounds were dissolved in HBS-P buffer
(10 mm HEPES [pH 7.4], 0.15m NaCl, 0.005% v/v surfactant P20; GE
Healthcare) supplemented with 10 mm CaCl2. The flow rate was
20 mLminꢁ1 and the injection volume was 20 mL. After each binding mea-
surement, the surface was regenerated with 10 mm EDTA. Single mea-
surements were carried out for each condition.
23,23’-Dithiobis[N-(ethyl a-d-mannopyranosyl-(1!2)-a-d-mannopyrano-
syl),N’-(3,6,9,12-tetraoxa-tricosanyl)thiourea] (34): Reaction of manno-
side 28 (25.0 mg, 0.065 mmol) and linker 39 (60.1 mg, 0.130 mmol) afford-
ed neoglycoconjugate 34 in the form of the disulfide (38.3 mg,
0.047 mmol, 73% over two steps) as a colourless syrup after purification
by passage through Sephadex LH-20 (MeOH/H2O 9:1). 1H NMR
(500 MHz, CD3OD): d=5.11 (d, J=1.5 Hz, 1H; 1-H), 4.97 (d, J=1.5 Hz,
1H; 1’-H), 3.98–3.96 (m, 1H; 2’-H), 3.90–3.80 (m, 5H), 3.75–3.50 (m,
26H), 3.47 (t, J=6.5 Hz, 2H; OCH2CH2CH2), 2.69 (t, J=7 Hz, 2H;
CH2SS), 1.72–1.63 (m, 2H), 1.61–1.53 (m, 2H), 1.44–1.28 ppm (m, 14H);
13C NMR (125 MHz, D2O): d=104.2 (d; C-1), 100.1 (d; C-1’), 80.5 (d; C-
2), 75.1, 74.8, 72.4, 72.1, 71.9, 71.6, 71.3, 71.1, 70.7, 69.0, 68.8, 67.4, 63.2,
and 63.0 (t, 2C; C-6 and C-6’), 45.3 (brt; CH2NH2), 39.8 (t; CH2SS), 30.7,
30.6, 30.6, 30.3, 30.2, 29.4, 29.4, 27.2 ppm; C=S undetected; IR (neat): n˜ =
3330 (brs), 2923, 2853, 1645, 1556, 1456, 1348, 1297, 1057 cmꢁ1; HRMS:
m/z: calcd for C34H66N2O15S2Na+ [M+Na]+: 829.3802; found: 829.3802.
23,23’-Dithiobis[N-(ethyl a-d-mannopyranosyl-(1!2)-a-d-mannopyrano-
syl-(1!2)-a-d-mannopyranosyl),N’-(3,6,9,12-tetraoxa-tricosanyl)thiourea]
(35): Reaction of the formate salt of mannoside 29 (21.4 mg, 0.036 mmol)
and linker 39 (33.0 mg, 0.071 mmol) afforded neoglycoconjugate 35
(24.4 mg, 0.025 mmol, 72% over two steps) as a white solid after purifica-
tion by passage through Sephadex LH-20 (MeOH/H2O 9:1). 1H NMR
(500 MHz, CD3OD): d=5.28 (d, J=1.5 Hz, 1H; 1-H), 5.10 (d, J=1.5 Hz,
1H; 1’-H), 4.98 (d, J=1.5 Hz, 1H; 1’’-H), 4.05–4.02 (m, 1H; 2-H), 3.99–
3.95 (m, 1H; 2’’-H), 3.89–3.80 (m, 6H), 3.76–3.50 (m, 30H), 3.47 (t, J=
6.5 Hz, 2H; OCH2CH2CH2), 2.69 (t, J=7.0 Hz, 0.3H; CH2SS), 2.49 (t,
J=7.5 Hz, 1.7H; CH2SH), 1.63–1.53 (m, 4H), 1.45–1.35 ppm (m, 14H);
13C NMR (125 MHz, CD3OD): d=104.1 (d; C-1’’), 102.5 (d; C-1), 100.0
(d; C-1’), 80.6 (d; C-2’), 80.2 (d; C-2), 75.02, 75.00, 74.7, 72.43, 72.40, 72.0,
71.92, 71.87, 71.5, 71.3, 71.1, 70.7, 69.2, 69.0, 68.8, 67.4; 63.3, 63.2, and
62.9 (t, 3C; 3ꢇC-6), 45.2 (brt; CH2NH), 35.2 (t; CH2SS), 30.69, 30.63,
30.5, 30.2, 29.4, 27.2, 25.0 ppm (t; CH2SH); C=S undetected; HRMS:
m/z: calcd for C40H76N2O20S2Na+ [M+Na]+: 991.4331; found: 991.4330.
Affinity measurements: DC-SIGN-ECD (500–700 RU) or gp120 (approx-
imately 500 RU) were immobilized in Flow cell 2 on a CM5 sensor chip
as described above. In both cases, Flow cell 1, treated as above, served as
a reference cell. Binding of fluid-phase GNPs was determined over a
range of concentrations (2.3–10.7 mm when determining binding to DC-
SIGN, 0.01–5.0 mm when determining binding to gp120) in HBS-P supple-
mented with 10 mm CaCl2. GlcC5Au and HO2C-Au GNPs were tested at
concentrations as high as 2 mm. The injection volume was 20 mL and the
flow rate was 20 mLminꢁ1. The surface was regenerated with 10 mm
EDTA. Equilibrium dissociation constants (KD) as well as association
(ka) and dissociation constant (kd) rates were calculated using the BIA
evaluation software 4.1 (GE Healthcare). Curves were first fitted to a
single 1:1 binding model and then to more complex binding models, se-
lecting that which gave the best fit as judged by the lowest c2 value and
the best distribution of residuals.
23,23’-Dithiobis[N-(ethyl a-d-mannopyranosyl-(1!2)-a-d-mannopyrano-
syl-(1!2)-a-d-mannopyranosyl-(1!3)-a-d-mannopyranosyl),N’-(3,6,9,12-
tetraoxa-tricosanyl)thiourea] (36): Reaction of mannoside 30 (63.0 mg,
0.0874 mmol) and linker 39 (81.0 mg, 0.175 mmol) afforded neoglycocon-
jugate 36 (80.0 mg, 0.071 mmol, 81% over two steps) as a white solid
after passage through Sephadex LH-20 (MeOH/H2O 9:1). 1H NMR
(500 MHz, D2O): d=5.38 (s, 1H), 5.32 (s, 1H), 5.07 (s, 1H), 4.87 (s, 1H),
4.13–3.59 (m, 44H), 3.51 (brt, 2H; OCH2CH2CH2), 2.73 (t, J=7.1 Hz,
2H; CH2SS), 1.78–1.56 (m, 4H), 1.49–1.28 ppm (m, 14H); 13C NMR
(125 MHz, D2O): d=102.2, 100.62 (overlapped), 99.7, 78.4, 78.1, 73.3,
73.23, 73.17, 72.9, 71.2, 70.3, 70.0, 69.9, 69.7, 69.2, 66.9, 66.8, 65.9, 61.0,
60.9, 60.7, 43.7 (brt; CH2NH), 39.0, 34.1, 29.7, 29.6, 29.5, 29.3, 28.5,
26.1 ppm; C=S undetected; IR (KBr): n˜ =3361 (broad), 2926, 2856, 1646,
General procedure for thiourea coupling
A solution of the respective aminoethyl (oligo)mannoside 27–32 (0.09m,
1 equiv) in methanol (for 27, 28, and 30) or H2O/iPrOH/CH3CN (1:1:1)
(for 29, 31, and 32) was added to a solution of isothiocyanate linker 39
(0.12m, 2 equiv) in methanol or H2O/iPrOH/CH3CN (1:1:1), respectively.
The pH was adjusted to 8–9 with triethylamine and the solution was
stirred for 3–5 h at room temperature. The solvent was then removed
under reduced pressure and the crude residue was triturated with Et2O
to remove the excess linker (except in the case of the neoglycoconjugate
of 27). The resulting thioacetyl derivatives were purified by FCC or on
Sephadex LH-20 (for complete characterization of these intermediates,
see the Supporting Information). The thioacetyl derivatives were treated
with sodium methoxide (1 equiv, 1 n in MeOH). The resulting mixture
was stirred for 2 h at room temperature and then neutralized with 0.1n
HCl. Purification on a column of Sephadex LH-20 followed by lyophili-
1556, 1459, 1352, 1296, 1131, 1058 cmꢁ1
C46H86N2O25S2Na+ [M+Na]+: 1153.4859; found: 1153.4879.
23,23’-Dithiobis[N-(ethyl
(bis(a-d-mannopyranosyl-(1!2)-a-d-manno-
pyranosyl-(1!3,6))-a-d-mannopyranosyl)),N’-(3,6,9,12-tetraoxa-tricosa-
; HRMS: m/z: calcd for
A
ACHTUNGTRENNUNG
9884
ꢆ 2009 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim
Chem. Eur. J. 2009, 15, 9874 – 9888