Crystal Engineering
COMMUNICATION
Research in Evolutional Area (CITY AREA) program by the Ministry
of Education, Culture, Sports, Science and Technology, Japan.
ergies (EMP2) for the complexes A–D are À10.75, À2.26,
À6.73, and À8.79 kcalmolÀ1, respectively. Complex A has
the largest (most negative) interaction energy among them,
supporting the validity of the experimentally observed struc-
tures, in which the hydrogen atom of chloroform fits into
the pocket of the DBA. The correlation interaction energy
of the complex A (Ecorr =À15.86 kcalmolÀ1) is significantly
larger than that of the complex B, indicating that the chlor-
ine atoms particularly contribute to the dispersion. The elec-
trostatic interaction (Ees) also acts as an attractive force in
the complex A, although its magnitude is smaller by a factor
Keywords: ab initio calculations
· annulenes · crystal
engineering · dispersion energy · supramolecular chemistry
Campbell, G. Eglinton, W. Henderson, R. A. Raphael, Chem.
Commun. 1966, 87–89.
[2] a) C. S. Jones, M. J. OꢀConnor, M. M. Haley in Acetylene Chemistry
(Eds.: F. Diederich, P. J. Stang, R. R. Tykwinski), Wiley-VCH, Wein-
heim, 2005, pp. 303–385; b) U. H. F. Bunz, Y. Rubin, Y. Tobe,
e) J. A. Marsden, J. J. Miller, L. D. Shirtcliff, M. M. Haley, J. Am.
[4] Examples for molecular assemblies, see: a) H. Enozawa, M. Hasega-
1920; b) S. H. Seo, T. V. Jones, H. Seyler, J. O. Peters, T. H. Kim,
Furukawa, H. Uji-i, T. Uchino, T, Ichikawa, J. Zhang, W. Mam-
douh, M. Sonoda, F. C. De Schryver, S. De Feyter, Y. Tobe, J. Am.
1871–1872; b) I. Hisaki, Y. Sakamoto, H. Shigemitsu, N. Tohnai, M.
4187; c) K. Tahara, T. Fujita, M. Sonoda, M. Shiro, Y. Tobe, J. Am.
[6] One of the interesting issues for crystal engineering is how molecu-
lar symmetry effects on that of molecular aggregation motifs, and
then, hole crystals. To answer this question, G. R. Desiraju proposed
the importance of symmetry carry-over crystallization (SCC), point-
ing to C3-symmetric molecules as examples, see: a) A. Anthony,
G. R. Desiraju, R. K. R. Jetti, S. S. Kuduva, N. N. L. Madhavi, A.
b) P. K. Thallapally, K. Chakraborty, A. K. Katz, H. L. Carrell, S.
Kotha, G. R. Desiraju, CrystEngComm 2001, 31, 1–3.
of eight than that of the dispersion forces, that is, Ecorr
.
In Figure 4a, two open circles correspond to the com-
plexes experimentally observed in crystals 1·CHCl3 and
2·CHCl3. The R value for 1·CHCl3 (2.99 ꢂ) is close to that
at the potential minimum and the R value for 2·CHCl3
(3.29 ꢂ) is slightly larger. Their EMP2 at these distances are
À10.4 and À8.8 kcalmolÀ1, respectively. These calculations
are consistent with their crystallization behaviors. Namely,
crystallization of 1 was significantly dependent on the sol-
vent and the molecular arrangement in crystal 1·CHCl3 re-
sults from specific strong interaction with chloroform.
Meanwhile, the molecular arrangement in crystal 2·CHCl3
was achieved even when THF was adopted as the solvent,
implying that interaction between the DBA and chloroform
is not significantly specific for controlling the crystal struc-
ture.
In conclusion, we described that C3-symmetric DBAs 1
¯
and 2 underwent SCC into the space groups of R3c and R3c,
respectively. In the crystals, the DBA core and chloroform
form the complex, in which a hydrogen atom of the chloro-
form molecule fits into a “pocket” of the DBA. The com-
plex is the first example for complexation between DBA
and an organic molecule. The calculations of the chloro-
form–DBA complexes show that most of the affinity was
produced by the dispersion forces between the benzene
rings of the DBA and the chlorine atoms (À15.86 kcal
molÀ1), while contribution of the electrostatic interaction
was only À1.97 kcalmolÀ1.
Finally, we suggest that the SCC of planer p-conjugated
molecules should require the following two key steps: 1)
construction of highly-symmetric layer assembly and 2)
stacking of the layer with orienting its symmetrical axes to
those of adjacent ones. In this study, the former step was ac-
complished by rational design of the DBAs and inclusion of
chloroform into the void space. The latter was done by spe-
cific interaction between chloroform and the pocket of the
DBA. However, many unsettled issues still remain concern-
ing SCC, such as what crucially controls the symmetry of
molecular assemblies. Further investigation is continuing in
our laboratory.
[7] Complexation with metals such as Ni was reported, see: a) J. D. Fer-
549; d) J. D. Ferrara, A. A. Tanaka, C. Fierro, C. A. Tessier-Youngs,
[8] To date only three crystal structures are reported for SCC of DBAs
in reference [5a–c], although the last one has pseudo C3-symmetry.
[10] For the details of crystallographic analyses, see the Supporting Infor-
mation.
[11] Crystal data for 1·CHCl3: (C39H21N3)
19.8463(4) ꢂ, c=13.7227(3) ꢂ, a=b=908,
4680.87(16) ꢂ3, T=213 K, trigonal, space group R3c (no. 161), Z=
6, m
(CuKa)=2.929 mmÀ1, 1calcd =1.386 gcmÀ3, 15269 collected, 1903
ACHTUNGTRENNUNG
Acknowledgements
AHCTUNGTRENNUNG
This work was financially supported by a Grant-in-Aid for Scientific Re-
search and the Cooperation for Innovative Technology and Advanced
unique (Rint =0.084) reflections, the final R1 and wR2 values 0.050
[I>2.0s(I)] and 0.124 (all data), respectively. Crystal data for
Chem. Eur. J. 2009, 15, 13336 – 13340
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13339